Sulfitobacter sp. TCYB15: ABM428_01045
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Entry
ABM428_01045 CDS
T10553
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
suly Sulfitobacter sp. TCYB15
Pathway
suly03030
DNA replication
suly03410
Base excision repair
suly03420
Nucleotide excision repair
suly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
suly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABM428_01045 (polA)
03410 Base excision repair
ABM428_01045 (polA)
03420 Nucleotide excision repair
ABM428_01045 (polA)
03440 Homologous recombination
ABM428_01045 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suly03032
]
ABM428_01045 (polA)
03400 DNA repair and recombination proteins [BR:
suly03400
]
ABM428_01045 (polA)
Enzymes [BR:
suly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABM428_01045 (polA)
DNA replication proteins [BR:
suly03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABM428_01045 (polA)
DNA repair and recombination proteins [BR:
suly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ABM428_01045 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABM428_01045 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
XCF10454
UniProt:
A0AAU8C337
LinkDB
All DBs
Position
217719..220517
Genome browser
AA seq
932 aa
AA seq
DB search
MSGTFGKGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLHRYVEGNTGPD
APTHVAVIFDKGSHTFRNDMYDKYKANREAMPEDLRPQIPLTRTATEAFNIACKEKEGFE
ADDIIATLAVQARAAGGRCTIISSDKDLMQLVGGGVEMLDAMKNKSIDRDGVFEKFGVYP
DRVVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGDLDALLERASEIKQPKRRQTLIDH
ADQIRLSRDLVKLDENTPLDFTLDDLEVRDPDADQLLGFLAEMEFRTLSKRVAEVLGKEA
PTIAEAPVAADAPAAADVPFDAELYEHVSDTAALQAWIDRIYEFGYVAVDTETTGLDDMV
AQLVGVSLCVEPGKACYIPLIHKARGSDDLFGSDDLAEGQIPTEEALRLLTPMLEDPSIL
KIGQNMKYDSKIFAQLGINVAPIDDTMLLSYAMHAGLHGHGMDTLSERYLSHTPIPIKPL
LGTGKSAITFDKVPLADAVKYAAEDADITLRLWQLFKPQLHRVGVTKVYETLERPLVPVL
AAMERSGVKVDRDTLSRMSNAFAQKMAGLEDEIYELAGRKFNVGSPKQLGEILFDEMGLE
GGKKGKTGAYATGADVLEDLATEHDLPARVLDWRQLSKLKSTYTDALQDHINPDTGRVHT
SYSIAGASTGRLASTDPNLQNIPIRSEEGRRIREAFVAEPGKALVALDYSQIELRILAHI
ANIPELKQAFQDGIDIHALTASEMFGVPLDEMTSDVRRQAKAINFGVIYGISGFGLARNL
RIPRAEAQGFIDRYFERFPGIRTYMNDTKAFAKEHGFVQTLFGRKIHTPEISAKGPRAGF
AQRAAINAPIQGTAADVIRRAMIRMPDAIKDLPATMLLQVHDELLFEVEKGAEDDLIAAA
RKVMENAADPVVKLDVKLDVDAGVGASWAEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcacatttggcaaaggtcaccatctgcatctgatcgacgggtcggcgtttatt
ttccgcgcctatcacgcgctgccaccgctgacgcgcaagtcggacgggctgccgattggg
gcggtggcgggtttttgcaacatgttgcaccgctatgtcgaaggcaacacagggccggat
gcaccgacccatgtggccgtgatctttgacaagggcagccataccttccgcaatgacatg
tatgacaaatacaaggccaaccgcgaggccatgcccgaagacctgcgaccgcagatcccg
ctgacccgtaccgccaccgaagcgttcaacatcgcttgcaaggaaaaggaaggtttcgag
gcggacgacatcattgccacgctcgccgtacaggcacgcgccgcaggtggccgctgcacc
atcatcagttcggacaaggatttgatgcagctggtcggcggcggtgttgaaatgctggat
gcgatgaaaaacaagagcatcgaccgcgacggtgtgttcgagaaattcggcgtctatccc
gatcgtgtggtggatgtgcaggcgctggcgggcgactctgtcgataacgtccccggggca
cccgggatcgggatcaagacggccgctttgctgatcaacgaatatggtgatctggatgcg
ctgctggagcgcgcgagcgagatcaagcagcccaagcggcgccagaccctgatcgaccat
gccgaccagatccgcctgtcccgtgatctggtcaagctggacgagaacacgccgctggac
ttcacccttgacgatcttgaggtgcgcgaccctgatgcagatcaactgctgggctttctg
gccgagatggagtttcgcaccctgtccaaacgtgtggccgaggtgctggggaaagaggcc
cccaccatcgccgaggcaccggtcgctgcagatgccccggccgcggcggatgtgcccttt
gacgcagagctctatgaacacgtcagtgacacagccgcgctgcaggcctggatcgaccgt
atctacgaattcggctatgtcgccgtcgatacagagaccaccgggctggacgatatggtc
gcgcagcttgtcggggtttcgctttgtgtcgaaccgggcaaggcctgctacatcccgctc
attcacaaggcgcgcggcagcgatgatctgttcgggagtgatgatctggccgaggggcag
atccctaccgaagaggcgctgcgcctgctgaccccgatgctggaggatccctcgatcctc
aagatcgggcagaacatgaaatacgacagcaagattttcgctcagcttgggatcaacgtc
gcgcccatcgacgacacgatgctgctgtcctacgcgatgcacgccgggctgcacggccac
ggcatggacacgctgtctgaacgctatctgtcgcacacaccgatcccgatcaagccgctg
ctggggacaggcaaatcggccatcacctttgataaggtgccgctcgccgatgcggtgaaa
tatgccgccgaggatgcggatatcactctgcggctgtggcaactgttcaaaccccagctt
caccgcgtcggggtgacgaaggtttatgaaacgcttgaacgcccgcttgtgcctgttttg
gcggcaatggaacgctctggcgtgaaggtggaccgcgatacgctgagccggatgtccaac
gcctttgcccagaagatggcggggcttgaggacgagatctatgagctcgccgggcgcaaa
ttcaacgtcggctcgcccaagcaactgggggaaatcctgttcgacgagatggggctggaa
ggcggcaagaaaggcaagacgggggcctatgccaccggtgccgatgtgcttgaggacctc
gcgacagagcatgacctgcctgcgcgggtgctggactggcggcagctgtccaagctgaaa
tcgacctataccgacgcgctgcaggatcacatcaaccccgacacgggccgtgtgcatacg
tcctattccatcgcgggggcgtcgaccgggcggctggcttcgaccgatccgaacctgcaa
aacatcccgatccggtccgaagaagggcggcgcatccgcgaggcctttgttgcagagccg
ggcaaggcgctggtcgcgcttgactattcccagatcgagctgcggatactggcgcatatc
gccaatatccccgagcttaagcaggcgtttcaggacggcatcgacattcacgcgctgacc
gcttcggaaatgttcggcgtgccactggacgagatgacgtcggacgtgcgtcgtcaggcc
aaggcgatcaactttggcgtgatctatggcatctcgggctttggtctggcgcgcaacctg
cgtatcccgcgcgccgaagcacaggggttcatcgaccgctatttcgaacgtttccccggc
atccgtacctatatgaatgacaccaaggctttcgccaaagagcatggctttgtgcagacg
ctgttcgggcgcaagatccacacgcccgagatcagcgccaagggcccccgcgccggtttt
gcccaacgggcggccatcaacgcgcctattcagggcaccgccgccgatgtgatccgccgc
gcgatgatccgtatgcccgacgcgatcaaggatctgcccgccaccatgttgttgcaggtc
cacgatgaattgctgttcgaggtggagaaaggggccgaggacgatctgatcgccgccgca
cgcaaggtgatggagaatgcagccgatccggtggtcaaactggatgtgaagctcgacgtg
gatgcaggcgtcggggcgagttgggcggaggcgcattaa
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