KEGG   Sulfitobacter sp. TCYB15: ABM428_01045
Entry
ABM428_01045      CDS       T10553                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
suly  Sulfitobacter sp. TCYB15
Pathway
suly03030  DNA replication
suly03410  Base excision repair
suly03420  Nucleotide excision repair
suly03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:suly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ABM428_01045 (polA)
   03410 Base excision repair
    ABM428_01045 (polA)
   03420 Nucleotide excision repair
    ABM428_01045 (polA)
   03440 Homologous recombination
    ABM428_01045 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:suly03032]
    ABM428_01045 (polA)
   03400 DNA repair and recombination proteins [BR:suly03400]
    ABM428_01045 (polA)
Enzymes [BR:suly01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ABM428_01045 (polA)
DNA replication proteins [BR:suly03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     ABM428_01045 (polA)
DNA repair and recombination proteins [BR:suly03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     ABM428_01045 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ABM428_01045 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: XCF10454
UniProt: A0AAU8C337
LinkDB
Position
217719..220517
AA seq 932 aa
MSGTFGKGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLHRYVEGNTGPD
APTHVAVIFDKGSHTFRNDMYDKYKANREAMPEDLRPQIPLTRTATEAFNIACKEKEGFE
ADDIIATLAVQARAAGGRCTIISSDKDLMQLVGGGVEMLDAMKNKSIDRDGVFEKFGVYP
DRVVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGDLDALLERASEIKQPKRRQTLIDH
ADQIRLSRDLVKLDENTPLDFTLDDLEVRDPDADQLLGFLAEMEFRTLSKRVAEVLGKEA
PTIAEAPVAADAPAAADVPFDAELYEHVSDTAALQAWIDRIYEFGYVAVDTETTGLDDMV
AQLVGVSLCVEPGKACYIPLIHKARGSDDLFGSDDLAEGQIPTEEALRLLTPMLEDPSIL
KIGQNMKYDSKIFAQLGINVAPIDDTMLLSYAMHAGLHGHGMDTLSERYLSHTPIPIKPL
LGTGKSAITFDKVPLADAVKYAAEDADITLRLWQLFKPQLHRVGVTKVYETLERPLVPVL
AAMERSGVKVDRDTLSRMSNAFAQKMAGLEDEIYELAGRKFNVGSPKQLGEILFDEMGLE
GGKKGKTGAYATGADVLEDLATEHDLPARVLDWRQLSKLKSTYTDALQDHINPDTGRVHT
SYSIAGASTGRLASTDPNLQNIPIRSEEGRRIREAFVAEPGKALVALDYSQIELRILAHI
ANIPELKQAFQDGIDIHALTASEMFGVPLDEMTSDVRRQAKAINFGVIYGISGFGLARNL
RIPRAEAQGFIDRYFERFPGIRTYMNDTKAFAKEHGFVQTLFGRKIHTPEISAKGPRAGF
AQRAAINAPIQGTAADVIRRAMIRMPDAIKDLPATMLLQVHDELLFEVEKGAEDDLIAAA
RKVMENAADPVVKLDVKLDVDAGVGASWAEAH
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgtccggcacatttggcaaaggtcaccatctgcatctgatcgacgggtcggcgtttatt
ttccgcgcctatcacgcgctgccaccgctgacgcgcaagtcggacgggctgccgattggg
gcggtggcgggtttttgcaacatgttgcaccgctatgtcgaaggcaacacagggccggat
gcaccgacccatgtggccgtgatctttgacaagggcagccataccttccgcaatgacatg
tatgacaaatacaaggccaaccgcgaggccatgcccgaagacctgcgaccgcagatcccg
ctgacccgtaccgccaccgaagcgttcaacatcgcttgcaaggaaaaggaaggtttcgag
gcggacgacatcattgccacgctcgccgtacaggcacgcgccgcaggtggccgctgcacc
atcatcagttcggacaaggatttgatgcagctggtcggcggcggtgttgaaatgctggat
gcgatgaaaaacaagagcatcgaccgcgacggtgtgttcgagaaattcggcgtctatccc
gatcgtgtggtggatgtgcaggcgctggcgggcgactctgtcgataacgtccccggggca
cccgggatcgggatcaagacggccgctttgctgatcaacgaatatggtgatctggatgcg
ctgctggagcgcgcgagcgagatcaagcagcccaagcggcgccagaccctgatcgaccat
gccgaccagatccgcctgtcccgtgatctggtcaagctggacgagaacacgccgctggac
ttcacccttgacgatcttgaggtgcgcgaccctgatgcagatcaactgctgggctttctg
gccgagatggagtttcgcaccctgtccaaacgtgtggccgaggtgctggggaaagaggcc
cccaccatcgccgaggcaccggtcgctgcagatgccccggccgcggcggatgtgcccttt
gacgcagagctctatgaacacgtcagtgacacagccgcgctgcaggcctggatcgaccgt
atctacgaattcggctatgtcgccgtcgatacagagaccaccgggctggacgatatggtc
gcgcagcttgtcggggtttcgctttgtgtcgaaccgggcaaggcctgctacatcccgctc
attcacaaggcgcgcggcagcgatgatctgttcgggagtgatgatctggccgaggggcag
atccctaccgaagaggcgctgcgcctgctgaccccgatgctggaggatccctcgatcctc
aagatcgggcagaacatgaaatacgacagcaagattttcgctcagcttgggatcaacgtc
gcgcccatcgacgacacgatgctgctgtcctacgcgatgcacgccgggctgcacggccac
ggcatggacacgctgtctgaacgctatctgtcgcacacaccgatcccgatcaagccgctg
ctggggacaggcaaatcggccatcacctttgataaggtgccgctcgccgatgcggtgaaa
tatgccgccgaggatgcggatatcactctgcggctgtggcaactgttcaaaccccagctt
caccgcgtcggggtgacgaaggtttatgaaacgcttgaacgcccgcttgtgcctgttttg
gcggcaatggaacgctctggcgtgaaggtggaccgcgatacgctgagccggatgtccaac
gcctttgcccagaagatggcggggcttgaggacgagatctatgagctcgccgggcgcaaa
ttcaacgtcggctcgcccaagcaactgggggaaatcctgttcgacgagatggggctggaa
ggcggcaagaaaggcaagacgggggcctatgccaccggtgccgatgtgcttgaggacctc
gcgacagagcatgacctgcctgcgcgggtgctggactggcggcagctgtccaagctgaaa
tcgacctataccgacgcgctgcaggatcacatcaaccccgacacgggccgtgtgcatacg
tcctattccatcgcgggggcgtcgaccgggcggctggcttcgaccgatccgaacctgcaa
aacatcccgatccggtccgaagaagggcggcgcatccgcgaggcctttgttgcagagccg
ggcaaggcgctggtcgcgcttgactattcccagatcgagctgcggatactggcgcatatc
gccaatatccccgagcttaagcaggcgtttcaggacggcatcgacattcacgcgctgacc
gcttcggaaatgttcggcgtgccactggacgagatgacgtcggacgtgcgtcgtcaggcc
aaggcgatcaactttggcgtgatctatggcatctcgggctttggtctggcgcgcaacctg
cgtatcccgcgcgccgaagcacaggggttcatcgaccgctatttcgaacgtttccccggc
atccgtacctatatgaatgacaccaaggctttcgccaaagagcatggctttgtgcagacg
ctgttcgggcgcaagatccacacgcccgagatcagcgccaagggcccccgcgccggtttt
gcccaacgggcggccatcaacgcgcctattcagggcaccgccgccgatgtgatccgccgc
gcgatgatccgtatgcccgacgcgatcaaggatctgcccgccaccatgttgttgcaggtc
cacgatgaattgctgttcgaggtggagaaaggggccgaggacgatctgatcgccgccgca
cgcaaggtgatggagaatgcagccgatccggtggtcaaactggatgtgaagctcgacgtg
gatgcaggcgtcggggcgagttgggcggaggcgcattaa

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