Sulfitobacter sp. TCYB15: ABM428_03035
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Entry
ABM428_03035 CDS
T10553
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
suly Sulfitobacter sp. TCYB15
Pathway
suly03018
RNA degradation
Brite
Enzymes [BR:
suly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ABM428_03035
Messenger RNA biogenesis [BR:
suly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABM428_03035
Ribosome biogenesis [BR:
suly03009
]
Prokaryotic type
rRNA helicases
ABM428_03035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XCF10824
UniProt:
A0AAU8C3X2
LinkDB
All DBs
Position
complement(646713..648908)
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AA seq
731 aa
AA seq
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MIQTIADALATQGYDSLTPVQEAVTNPDLVEADLLVSAQTGSGKTVAFGLAIAPTLLGDD
EKFGHAGAPLALIIAPTRELAMQVSRELTWLYGKAGAVVTTCVGGMDTRTERRALDRGAH
IVVATPGRLCDHIKRNNINLSDIRAVVLDEADEMLDLGFREELEFILSEAPEERRTLLFS
ATVPAAIAKLAKSYQRDAQRVETVGEKKQHADIEYRALNVHPRDTENAIINVLRFYEAKN
AIVFCNTRAAVARLTTRFTNRGFSVVALSGELTQSERTNALQALRDGRARVCIATDVAAR
GIDLPNLELVVHADLPSNSDTLLHRSGRTGRAGRKGVSALIVPAKMRSKANRLLGGAKLK
VEWANPPSAEEVNAEDEKRLLADSAWSDPIPDDAAGFVANLVEQFSAEQLATAFVNLYRA
RQSAPEQLAEPGTPADERPRGDFGPSVWFSISIGRNDDAEPRTILPMICRMGDLTKDDVG
AIRVQPSHTFVEILETSADKFTNALGPDMKVEDGAVVTKLDKAPDLSRGPKPGGRGPKPN
RGGPRSDNGPRPDRGPRPDRAPYDPDAPRAPRKPRAASTEEASVTYEKPRGPRPDKGFDK
PRGDKPKFDKPKAPKGERPPKSHKTERSPMKPGATPKPKSAGKPDSFDKPGGKPKAKAVW
KKEKPADRGADRPRGDGKPADKPFKARAADPSKRFVPPGKLGAKPKGGKPSGKAGGGDAA
PKRGKSSFRPK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
ttgatccaaaccatcgcagacgcgcttgccacccaaggctatgattcgcttacccccgtc
caagaggcggttaccaacccagatctggtcgaagccgaccttctggtgtcagcccaaacg
gggtccggcaagacagtggcctttggtctggccatcgcaccgacccttttgggcgacgat
gaaaaattcggacacgctggcgcgcccctggcgctgatcatcgcaccgacgcgcgaattg
gccatgcaggtcagccgcgagctgacgtggctttatggcaaggccggtgcggtcgtgacc
acctgcgtgggcggcatggacacacgcaccgaacgtcgtgcgctggaccgtggcgcgcat
atcgtcgtcgcgacaccgggccgcctatgcgaccacatcaaacgcaacaacatcaacctg
tccgacattcgtgccgtggtgctggatgaagcggacgagatgcttgatctgggtttccgc
gaagagctggaattcatcctctccgaagcgccggaagagcgccgcacactgttgttctcg
gccaccgtgcctgcggcgatcgccaagctggccaaatcctaccagcgtgatgcgcagcgc
gtcgaaaccgtgggcgaaaagaaacaacacgccgacatcgaataccgtgcgctgaacgtg
cacccgcgcgacactgaaaacgcgatcatcaacgtgctgcgcttttacgaggcgaaaaac
gccatcgtcttctgcaacacccgcgccgccgtcgcacgcctgaccacccgctttaccaac
cgcggcttttcggtcgtggcgctgtcgggcgagctgacgcaatccgaacgcaccaacgcg
ctgcaagcgctgcgcgacgggcgcgcgcgcgtctgtatcgcgacagatgttgccgcccgc
gggatcgacctgcccaacctcgaactggtggtgcatgccgatctgccgtcgaactctgac
acgttgctgcaccgctcgggccgtaccggtcgtgccggtcgcaagggtgtgtccgcgctg
atcgttcccgccaagatgcgcagcaaggcaaaccgtctgctgggcggtgccaagctgaag
gtcgaatgggccaacccgccctctgctgaagaagtgaacgccgaagacgaaaagcgtttg
ctggctgattccgcatggtctgacccgatccccgatgatgcagcgggctttgttgccaat
ctggtcgaacagttcagcgccgagcaactggcgacggcctttgtgaacctgtaccgtgca
cgccagtccgcgcccgagcagctggcagagcccggcacccctgccgacgaacgcccccgt
ggcgactttggcccgtcggtctggttctcgatctcgatcgggcgcaatgatgacgccgaa
ccccgcaccatcctgccgatgatctgtcgcatgggcgatctgaccaaggatgacgtgggc
gcgatccgcgtgcagcccagccatacctttgtcgagatcctcgagacctcggcagataaa
ttcaccaacgcgcttggccccgacatgaaggtcgaagacggcgcggttgtgaccaaactg
gacaaggcccccgatctgtcgcgcgggcccaagcccggcggccgtggccccaaaccgaac
cgtggcggcccgcgttccgacaacggcccgcgtcccgatcgtggccctcgccccgaccgc
gcaccctatgaccccgacgcaccacgtgcaccgcgcaaaccacgtgcggccagcaccgaa
gaagcatcggttacctacgagaagcctcgcggcccgcgccccgataaagggttcgacaaa
ccgcgcggcgacaagccgaagtttgacaagcccaaagcccccaaaggcgaacgcccgccc
aagtcgcacaagaccgaacggtctccgatgaagcccggtgccacgcctaaacccaagtct
gcgggcaagcctgacagcttcgacaaacccggcggcaagcccaaagccaaagccgtctgg
aaaaaggaaaagccagcggatcgtggggcggaccgcccccgtggcgacggcaaaccagcg
gataaaccgttcaaggcccgcgccgctgacccgtcgaaacgctttgtcccaccgggcaaa
ctgggcgcgaaacccaagggtggcaaaccttcgggcaaagccggtggcggcgatgcagcc
cccaaacgcggcaagtcgagctttcgcccgaaataa
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