Sulfitobacter sp. TCYB15: ABM428_04455
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Entry
ABM428_04455 CDS
T10553
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
suly Sulfitobacter sp. TCYB15
Brite
KEGG Orthology (KO) [BR:
suly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suly03032
]
ABM428_04455 (topA)
03400 DNA repair and recombination proteins [BR:
suly03400
]
ABM428_04455 (topA)
Enzymes [BR:
suly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABM428_04455 (topA)
DNA replication proteins [BR:
suly03032
]
Prokaryotic type
DNA Topoisomerases
ABM428_04455 (topA)
DNA repair and recombination proteins [BR:
suly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABM428_04455 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Motif
Other DBs
NCBI-ProteinID:
XCF11098
UniProt:
A0AAU8C4R7
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All DBs
Position
complement(928010..930676)
Genome browser
AA seq
888 aa
AA seq
DB search
MPVVVVESPAKAKTINSYLGSDYTVLASYGHVRDLPPKDGSVDPENGFDMTWEVAAASKK
HVKAIADALKDDNALILATDPDREGEAISWHLQEALTKRKSIKKDTPVSRVVFNQITKKA
VTEAMANPRQVDMPLVEAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVTLRLIVE
REMEIEAFRNREYWSVKALVATPRGQEFEARLVTLAGKKLDRFDLGNETQAEMAVQAITS
RDLTVTSVEAKPASRNPSAPFMTSTLQQEASRKFGMGARQTMSTAQRLYEAGHITYMRTD
GIDMAPEAITMARDAISDRFGAEYVPSEPRIYKNKAKNAQEAHECVRPTDMTKDADALKL
TEPDQRKLYDLIWKRTLACQMESARLERTTVEIGSKDEQVGLRATGQVVKFDGFLRVYEE
GRDDVVDEDDKRLPQITQGDKMDKRAVTPEQHFTQPPPRYTEATLVKRMEELGIGRPSTY
ASVVTTIQDREYVRKEGNRLFPEDKGRLVTAFLENYFRKYVGYDFTADLENQLDKVSAAD
ADYKDVLGRFWQDFSAAIAETADLRITEVLEKINEVLEPHLFPPNEDGSDPRLCPNCEIG
RLSMRTARSGGAFIGCSNYPECRYTRPFGPPDPEAEASAIPPDGKLLGEDMGDEIRVFKG
RFGPYVQRGPVTEENKKPPRQSVPKDWPAEELELERAVMLLSLPREIGPHPEDGVMVWAN
IGRYGPYIKHADSTSNRGGTNANLETLDEVFTVGMNRAVQLLAEKVASRGGRGKAAKPIR
EMGEHPDLGGEVNIMEGKYGPYVKWEKVNATIPKEVEPADLTMERAVELIEEKLAKSPAK
RKAATKKPAAKKTAAKKAPAKKTAAKKAPAKKPAAQKAPAKSAAAPEE
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgccagttgtcgtcgtcgaatcacctgccaaagctaaaacgatcaactcgtatctcggc
agtgattacaccgtgcttgcgtcctacggccacgtccgcgatctgccgcccaaagacgga
tcggtcgacccggaaaacgggttcgacatgacttgggaagtcgccgcagcaagcaagaaa
cacgtcaaagccatcgctgatgcgctgaaagacgacaacgcattgatcctcgcgactgac
cctgatcgcgaaggcgaagcgatcagctggcacctgcaagaggcgctgaccaagcgcaag
tcgatcaagaaggacacgccggtcagccgcgtggtgttcaaccagatcaccaaaaaggcc
gtgaccgaagcgatggcgaacccgcgtcaggtcgatatgccgctggtagaggcctatctg
gcccggcgcgcgctggattatctggtgggcttcaacctgtcgcccgtcctgtggcgcaaa
ttgcccggtgcaaagtcggcggggcgggtacagtcggtcaccctgcggctgatcgtcgag
cgcgagatggagatcgaggccttccgcaaccgcgaatactggagcgtcaaggcattggtc
gccacgccgcgcgggcaagagttcgaggcccgtctggtcacgcttgccggtaagaagctg
gaccgctttgatcttggcaatgaaacccaggccgagatggccgtacaggcgatcaccagc
cgcgatctgacggttaccagcgtcgaggcaaaacccgcgagccgcaacccctcggccccg
ttcatgacctcgaccctgcagcaggaagccagccgaaagttcggcatgggcgcacgccag
accatgagcacagcacagcgtctttatgaagccggtcacatcacctatatgcggaccgac
ggcatcgacatggcccccgaggcgatcacgatggcacgggacgctatctcggaccggttc
ggggcggagtatgtcccgtccgagccgcgtatctacaagaacaaggccaagaacgcgcaa
gaggcgcacgaatgtgtgcgccccaccgacatgaccaaagatgccgacgcgctgaaactg
accgaaccggatcaacgcaagctgtacgacttgatctggaagcgcacgctggcctgccag
atggaaagtgcgcgtctggaacgcaccacggtagagatcggcagcaaggacgaacaggtc
gggctgcgcgccaccggccaggtggtgaaattcgacggcttcctgcgcgtctacgaagaa
ggccgcgacgatgtcgtggacgaggatgacaagcgccttccgcagatcacccaaggcgac
aagatggacaaacgcgccgtcacgccagagcagcactttacccagccgcccccccgctac
actgaagcgacattggtcaagcgcatggaagagctgggaatcgggcgcccgtcgacctac
gccagcgttgtcaccaccattcaggaccgcgaatacgttcgcaaggaaggcaaccgtctg
ttccccgaggacaagggccgtttggtgacggccttcctcgagaattacttccgcaaatat
gtgggctatgacttcaccgccgatctggaaaaccagcttgataaggtgagcgcggcggat
gccgactataaggatgtgctgggccggttctggcaggatttctcggctgcgattgccgaa
acagccgatttgcgcatcaccgaggtgttggagaagatcaacgaggtactcgagccgcat
ctcttcccgcccaatgaggatggcagcgacccgcgcctgtgccccaactgcgagatcggg
cgtttgtccatgcgcacggcacggtccggcggcgcattcatcggctgttcgaactaccct
gaatgccgctatacccgccccttcggcccgcccgaccccgaggcagaagcctcggctatt
ccgcccgatggcaaactgctgggcgaggatatgggtgacgagattcgcgtgttcaaaggg
cgcttcggcccctatgtgcagcgcggccccgtcaccgaagagaacaaaaaaccgccgcgt
caatcggtgcccaaggactggcccgccgaagagctggagctggaacgcgctgtcatgctg
ctgtcgttgccgcgtgagatcggcccgcacccggaagatggggtgatggtctgggcaaat
atcgggcgctacggcccctatatcaaacacgccgacagcacgtcgaaccgtggcgggacc
aatgccaacctcgaaacactggacgaggtgttcaccgttggcatgaaccgcgccgtgcag
ttgctggccgagaaagtcgccagccgtggcgggcgtggcaaagcggcaaaaccgatccgc
gagatgggcgaacaccctgatctgggcggcgaggtcaacatcatggaaggcaaatacggg
ccttatgtgaagtgggagaaagtcaacgccaccatccccaaagaggtcgagcctgccgat
ctgaccatggaacgtgcggttgagctgatcgaggaaaagctggcgaaatcccctgccaag
cgcaaagccgcaaccaagaagcccgcagcaaagaaaaccgctgcgaaaaaggctccggcc
aagaaaacggctgccaagaaggctcccgcaaagaaaccagcggcccaaaaggcacccgca
aaatcggccgctgcaccggaagagtga
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