Sulfitobacter sp. TCYB15: ABM428_05230
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Entry
ABM428_05230 CDS
T10553
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
suly Sulfitobacter sp. TCYB15
Brite
KEGG Orthology (KO) [BR:
suly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suly03032
]
ABM428_05230
03400 DNA repair and recombination proteins [BR:
suly03400
]
ABM428_05230
Enzymes [BR:
suly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABM428_05230
DNA replication proteins [BR:
suly03032
]
Prokaryotic type
DNA Topoisomerases
ABM428_05230
DNA repair and recombination proteins [BR:
suly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABM428_05230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
SnAC
Motif
Other DBs
NCBI-ProteinID:
XCF11245
UniProt:
A0AAU8C5H3
LinkDB
All DBs
Position
1084868..1085833
Genome browser
AA seq
321 aa
AA seq
DB search
MGGAGLTYYGDDRPGISRQRRGRGFTYKAPDGTTIARGEERARLEAMAVPPAYEDVWMTP
LANGHLLATGRDTRNRKQYRYHEKWSEAQAETKFASLVDFAHALPRLRRFVARDLDQQAG
ERSFALASAVTLIDRASLRVGNPDYTRENGSYGTLTLRSKHVKLDGNVIRLRYTAKGGKK
VRRQINDRTLAKTLEKINDLPGAELLTWADAQGEVHQLNSAGLNAYIAEASGCDDFTAKT
FRTWAGTVAAFEAAEKGQATIKQLAEAAAAQLSNTPTVARNSYIHPAVIDLAGEAPPEIK
VGRKTGLFASEARLLTYLEQV
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgcggggctgacctattatggcgatgaccgccccggcatttcgcgtcagcgg
cgcgggcgcgggtttacctataaggcaccggacggcactaccatcgcccgcggagaagag
cgcgcgcggctggaagcgatggcggtgccgcccgcctatgaagacgtgtggatgacgcct
ttggcgaacgggcatttgctggctacggggcgcgacacccgcaatcgcaaacaatatcgc
tatcacgaaaaatggtcagaggcgcaggcagagacgaaattcgcaagcctggtggatttt
gcgcatgctttgccgcgcctgcgccgctttgtcgcccgcgatctggatcagcaggcaggc
gagcgcagttttgccttggccagcgccgtcacgctgatcgaccgcgcgtcgctgcgggtg
ggaaatccggactacacgcgcgagaatggcagctatggcacgctgaccctgcggtcgaaa
cacgtaaagctcgacgggaatgtgatccggctgcgttatacggccaagggcggcaagaag
gtgcggcggcagatcaacgaccggacgctggccaaaacgctggagaaaattaacgatctg
ccgggggcggagctgctgacatgggccgatgcgcagggcgaggtgcatcagttgaactca
gccggattgaacgcctatatcgccgaagcatcggggtgcgacgacttcaccgccaagacc
ttccgcacatgggcgggcaccgttgccgccttcgaggccgccgagaagggacaggccacc
atcaagcaattggccgaagccgccgccgcacagttgagcaatacgccgaccgtcgcgcgc
aacagctatatccatccggcggtgatcgatctggcgggcgaagcgccgcccgagatcaag
gtcgggcgcaagaccgggctattcgcctcggaagcgcggctgctgacgtatctggagcag
gtctga
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