Sulfitobacter sp. TCYB15: ABM428_05720
Help
Entry
ABM428_05720 CDS
T10553
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
suly Sulfitobacter sp. TCYB15
Pathway
suly03030
DNA replication
suly03430
Mismatch repair
suly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
suly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABM428_05720 (dnaE)
03430 Mismatch repair
ABM428_05720 (dnaE)
03440 Homologous recombination
ABM428_05720 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suly03032
]
ABM428_05720 (dnaE)
03400 DNA repair and recombination proteins [BR:
suly03400
]
ABM428_05720 (dnaE)
Enzymes [BR:
suly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABM428_05720 (dnaE)
DNA replication proteins [BR:
suly03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABM428_05720 (dnaE)
DNA repair and recombination proteins [BR:
suly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABM428_05720 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XCF11338
UniProt:
A0AAU8C5H0
LinkDB
All DBs
Position
1194527..1198060
Genome browser
AA seq
1177 aa
AA seq
DB search
MAQAPRFIHLRTHSEYSLLEGALRLKKLPDLCKGADMPALALTDTNNMFAALEFSVAMAG
AGVQPIIGCQVDLAYVKVQPGEKPRDPAPVVLLAQSEAGYENLMKLNSCLYIDKGGALPQ
VTLEELEALNGGLICLTGGAGGPVGQLLQGGQRPAAEALMARLHGAFADRLYVELQRHPG
EDGQPVAEQLTERGFVEMAYDMGIPLVATNDVYFPKADMYEAHDALICIADGAYVDQQQD
RRRLTAQHYFKSQAEMVTLFADLPEAIENTVEIAKRCAFMAYRRDPILPKFADDEIEELK
RQAHEGLKNRLRVIPHATTVEEYEKRLDFELGIIEGMGFPGYFLIVADFIKWAKDNNIPV
GPGRGSGAGSLVAYALTITDLDPLRYQLLFERFLNPERVSMPDFDIDFCMDRREEVIQYV
QRKYGRDKVGQIITFGALLSKAAVRDIGRVLQMPYGQVDRLSKMIPVEGVKPVSIEKALA
DEPRLREEAKNEEVVARLLNYGQQVEGLLRNASTHAAGVVIGDRPLDALVPLYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAVDQIKSSGRHLHVAADGTELFEPPEGLI
DDIATIPLDDEASYKLYASAKTVAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPVYCEVKNGQRERESVHPSIDHILEETQGIIVYQEQVMQIAQVMAGYSLGGADLLRR
AMGKKIAEEMAKERPKFEKGAMANGVDKKKASEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TAWLKANHPVEFMAGVMNCDIHLTDKLAVYFEEVRKRLELPWVPPCVNRSDATFKVVEGA
LVYALGALKNVGVEAMKLITEGRKVDGVDKPFATLFDLARRVDLKRVGKRPLEMLARSGA
FDQLDNNRRRVWQSLDGLVSYSAAIHEQKASNQVSLFGEAGDDLPEPRIVPCDDWEAAER
LTEEFKAVGFYLSGHPLDDYMGPMKRKSATGGVPFLTLDELTEKVSVKGAMNARLAGIVA
GRQERKSARGNRFAFAQLSDPTGAYEVTLFSDTLELARDHLETGSKVVVMVEATMESDQL
KLLGRSVVPIDTVVEDAGNMGLRIFVDDAGAIQAVADVLAGARSAARSAGKGPVQLCLMD
PTLPGEVEVDLCAEYPVTPKIKGAIRSLTGVMEVEEI
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagcaccccgattcattcacctgcgcacgcactccgaatattcgttgttggaa
ggggcgttgcggctgaaaaagctgcccgatctgtgcaagggggccgatatgccggcgctg
gccctgacggataccaacaacatgtttgccgcgttggaattctcggtcgccatggcgggg
gccggtgtgcaaccgatcatcggctgtcaggtggatctggcctatgtgaaggtgcaaccg
ggggaaaagccgcgcgatccggcccctgtggttttgctggcccaatccgaggccgggtat
gaaaacctgatgaagctgaactcctgcctttatatcgacaagggcggggcgctgccgcag
gtcaccttggaggagctggaagcgctgaacggtgggttgatctgtctgacgggcggggcg
ggcggccccgtggggcagctgttgcagggcggtcaacgccccgcggcagaggcattgatg
gcacggctgcacggggcttttgccgaccggctttatgtcgagttgcagcgccaccccggc
gaggatggccagcccgtggccgaacagctgaccgaacggggctttgtcgagatggcctat
gacatgggcatccctttggtcgcgacgaatgatgtctatttccccaaggccgatatgtac
gaggcccatgacgcgctgatctgtatcgcggacggggcctatgtcgatcagcagcaggac
cgtcgccgattgactgcgcagcactatttcaagtcgcaggccgagatggtgacgctgttt
gcggatttgccggaggcaatcgagaataccgtcgagattgccaagcggtgcgcgtttatg
gcgtatcggcgcgatccgatcctgccgaaatttgcggatgacgagatcgaggagctcaag
cggcaggcgcatgaggggctgaaaaaccggctgagggtgatcccccatgccaccaccgtc
gaagaatatgaaaaacggctggatttcgagctgggcatcatcgagggcatggggttcccc
ggctactttctgatcgttgccgattttatcaaatgggcgaaagacaataatattcccgtc
gggccggggcggggctcgggggcgggtagtctggtggcgtatgcgctgacgattaccgat
ctggacccgctgcgctatcaactgctgtttgaacggttcctgaatcccgaacgggtctcg
atgcccgactttgacatcgacttttgcatggatcgccgggaagaggtgatccagtatgtg
cagcgcaaatacgggcgcgacaaggtggggcagatcatcacctttggggcgcttttgtcc
aaggcggcggtgcgtgacatcgggcgggtgttgcagatgccttacgggcaggtggatcgc
ctgtccaagatgatccccgtcgagggcgtgaagcctgtcagcatcgaaaaggcactggcg
gatgaaccgcgcctgcgcgaggaggccaagaacgaggaagtcgtcgcgcggctgttgaac
tatggccagcaggtcgaggggctgttgcgcaacgcatcgacccacgcggcgggggttgtg
atcggggaccggccgctggacgcgctggtgccgctttatcaagacccgcggtccgatatg
cccgcgacgcagttcaacatgaaatgggtcgaacaggccggtctggtcaagttcgacttt
ctgggcctcaagaccctgaccgtcatccagaacgcggtcgaccagatcaaatcctcgggc
cgtcacctgcatgtggccgccgacgggacagagctgttcgagccgcccgaggggctgatc
gacgatatcgccaccatcccgctggacgacgaggcctcttacaagctttatgccagtgcc
aagacggtggcggtgttccaggtggaatccagcggcatgatggatgccctcaagcggatg
aagccgacctgtatcgaagacatcgtcgccttggtcgcgctgtaccggcccggcccgatg
gagaatattccggtctattgcgaggtcaagaacggccagcgcgaacgggaatccgtacat
ccgtcgattgaccatatcctggaggaaacgcaggggattattgtttaccaggaacaggtg
atgcagatcgcgcaggtcatggcgggctacagccttggcggcgctgacctgctgcgccgt
gcgatgggtaaaaagatcgccgaggaaatggccaaggaacgccccaagttcgaaaagggc
gcgatggccaacggggtcgacaagaaaaaggcgtctgaggttttcgaccttctggaaaaa
ttcgccaactacggtttcaacaaatcccacgccgccgcctatgcggtggtcagctatcag
accgcatggctcaaggcgaaccatccggtcgaattcatggccggcgtgatgaactgtgat
atccatctgaccgacaagctggcggtctatttcgaagaggtccgcaaacggctggaactg
ccctgggtgccgccttgtgtgaaccgcagtgatgcgacgttcaaggtggtcgagggcgcg
ttggtctatgctttgggcgcgctgaaaaacgtcggggtggaagccatgaagctgatcacc
gaaggccgcaaggtggacggtgtggacaagccctttgccacgctttttgatctggcgcgg
cgggttgatctgaaacgggtggggaaacgtccgcttgagatgctggcccgctccggtgcg
ttcgaccagctggacaacaaccgccgccgcgtctggcagtcgctggacgggttggtcagc
tattccgccgcgatccacgagcagaaagcctctaatcaggtgtcgctgtttggcgaggcg
ggggatgacttgccagagccgcgcatcgtgccttgcgacgattgggaggccgccgagcgc
ctgaccgaagagttcaaggccgtgggcttctatctgtcgggccacccgctggacgattac
atggggccgatgaaacgcaaatccgcaacaggcggtgtgccgttcctgacgctggacgag
ttgaccgagaaagtctcggtcaaaggagcgatgaacgcccgtctggcagggatcgtcgcc
ggacggcaggaacgtaaatcagcgcgcggcaaccgctttgcttttgcgcaactgtcggac
ccgacgggtgcctacgaggtgacgctgttttctgacacgctggaactggcgcgcgaccac
cttgaaacagggtcgaaggtcgtggtcatggtcgaggcgacgatggaaagcgaccagttg
aaactgctgggccggtccgtggtgccgatcgacacggtggtcgaggatgcgggcaacatg
gggctgcggatctttgtggatgatgcgggggctattcaggcggtcgccgatgtgctggcc
ggtgcccgatccgcggcgcgcagcgcgggcaaggggccggtacaactgtgcctgatggac
ccgaccctgcccggcgaggtggaggtagacctctgcgccgaataccctgtcacccccaag
atcaagggcgcgatccggtccctgaccggcgtgatggaggtagaggaaatctga
DBGET
integrated database retrieval system
