Sulfitobacter sp. TCYB15: ABM428_11370
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Entry
ABM428_11370 CDS
T10553
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
suly Sulfitobacter sp. TCYB15
Pathway
suly03420
Nucleotide excision repair
suly03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
suly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABM428_11370
03430 Mismatch repair
ABM428_11370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suly03400
]
ABM428_11370
Enzymes [BR:
suly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABM428_11370
DNA repair and recombination proteins [BR:
suly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABM428_11370
MMR (mismatch excision repair)
Other MMR factors
ABM428_11370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
XCF09686
UniProt:
A0AAU8C0R2
LinkDB
All DBs
Position
complement(2373980..2376400)
Genome browser
AA seq
806 aa
AA seq
DB search
MSDFDEMAAFEGASLSLRAMAARPQPYLDGLNPAQRAAVEQMDGPVLMLAGAGTGKTKAL
TARIVHLMNTGRARPNEILAVTFTNKAAREMKNRVGHMLGQSIEGMPWLGTFHAICVKLL
RRHAELVGLKSNFTILDTDDQLRLLKQLIKAEGIDDKRWPARLLSGVIDGWKNRALTPDK
IPTADAGAYNHRGAELYAQYQARLKDLNACDFGDLLLHMVTIFQQHEDVLGQYQRWFKYI
LVDEYQDTNVAQYLWLRLLASGHKNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAHVV
RLEQNYRSTPHILAAASGVIAGNEGRLGKTLWTESREGEKLRLIGHWDGEEEARWIGDEI
EALQRGTRELDPYTLDDMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAM
AYFRVVTSPDDDLAFERIVNTPKRGLGDKAQQNIQKTARENGVNLVEGARILLANGGIGG
RGAAQLRLLIDGIQRWSELARGPRLQTVVDDDSVIDEGAPLFHEEYGPPEVSHVELAQII
LDESGYTGFWQNDKTPEAPGRLENLKELVKALEQFENLQGFLEHVSLIMDNESDDGGAKV
SIMTLHAAKGLEFPAVFLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGITRAEQLCTI
SFAANRRVFGQWQSAMPSRFIDELPEAHVDVLTPPGLYGGGYGAAMPKSNLHEKAAEANV
YNSPGWRRLQTRSQARSVSQPSEARNVTIDMSAVSSFAMGERVFHQKFGYGEVVGIEGDK
LEISFDKAGVKKVVSRYLSASGDVPF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttcgacgaaatggccgcctttgagggcgcttccctatcattgcgcgctatg
gctgcgcgtccgcaaccctatcttgatgggctgaatccggcccagcgtgccgcggtggag
cagatggatggccctgtcttgatgctcgcgggggcaggcacgggcaagaccaaggctttg
acggcgcggatcgtgcatctgatgaacaccgggcgcgcccgcccgaacgagattctcgcg
gtaaccttcaccaataaggccgcgcgcgagatgaaaaaccgtgtggggcatatgctgggg
cagagcattgaagggatgccttggctgggtacgtttcatgcgatttgcgtcaagctgttg
cgccgccatgctgaattggtcgggctaaagtcgaacttcaccattctggacacggatgac
cagctgcgcctgctcaagcagttgatcaaagcggaagggattgatgacaaacgttggccc
gcgcgtttgctgtcaggcgttattgatggctggaaaaaccgcgcattgacgcccgacaaa
attcctacggccgatgcgggggcctataaccaccgcggggcggagctttatgcgcagtat
caagcgcggcttaaagatctgaacgcctgcgacttcggtgatttgctgctgcatatggtc
accatcttccagcagcacgaagacgtgctggggcaatatcagcggtggttcaaatatatt
ctggtggatgagtatcaggatacaaacgtggcacagtatttgtggctccgtctgctggcc
tctggtcacaaaaatatctgctgtgtcggggatgacgaccagtcgatctacggctggcga
ggggccgaggttggcaacatcctgcggttcgaaaaagattttcccggcgctcatgtggtg
cggttggaacagaattaccggtcaacaccgcacatcctggcggccgcttcgggcgtgatc
gcaggaaacgaggggcgtttgggcaagaccttgtggacggaatcccgtgagggtgaaaag
ctgcgtctcatcggccattgggatggcgaggaagaggcgcgctggatcggcgacgaaatc
gaagcgttgcagcgcggcacacgcgagcttgatccatacacattggacgatatggcgatt
cttgtacgggcatcacaccagatgcgcgcgttcgaggatcgattcctgaccattggccta
ccgtaccgcgtgatcggtggaccgcgtttctatgaacggttagaaattcgcgacgccatg
gcctatttcagggtggttacctcgcctgatgacgatcttgcttttgagagaatcgttaac
acgcccaagcgtggtttaggcgataaagcgcaacaaaatatacagaaaaccgcgcgcgaa
aacggtgtgaacctggtggagggggcgcggatcttgttggcgaatggcgggattggcggt
cgtggggcggcgcagttgcgtctgctcatcgacgggattcagcgctggtccgaactggcg
cggggcccgcgcctacagactgtggttgatgacgatagcgtcatcgatgaaggtgcgccg
ctgtttcacgaggaatatggcccgcccgaggtcagccatgtggaattggcgcagattatt
ttggatgaaagcggatatactggtttttggcagaacgacaaaacgccggaagctccgggg
cggcttgagaacctgaaggagctggttaaagcgttggagcagttcgagaatcttcaaggt
tttctggaacacgtcagcttgatcatggataatgaaagcgacgatggtggcgctaaagtg
tcgatcatgacgttgcacgcggccaaggggcttgagtttccggcggtgtttcttcccggc
tgggaggatgggctgtttccgtcgcagcgatcgatggacgaatctggcctgaaggggctg
gaggaagagcggcggcttgcctatgtcggaatcacacgggccgagcagctttgcacgatc
tcctttgcggccaaccgccgcgtgtttggtcagtggcaaagcgccatgccgtcacggttt
atcgacgaacttcccgaagctcatgtggatgtgctgaccccgccgggcctttatggtggc
gggtatggcgctgcgatgcccaaatcgaatctgcatgaaaaagccgctgaagcgaatgta
tataattctccggggtggcgaagattgcagacgcgcagccaagcgcgcagcgtgagccag
ccttcggaagcccgaaatgtgacgatcgacatgtccgcggtcagcagttttgcgatggga
gaacgggtgttccaccagaaatttggctatggcgaagttgttggaatcgaaggggataag
cttgagatcagctttgacaaggccggggtcaagaaggtcgtgtcgcgctatctgagcgca
tcgggtgacgttccgttctga
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