Sulfitobacter sp. SK012: C1J03_00310
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Entry
C1J03_00310 CDS
T05563
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sulz
Sulfitobacter sp. SK012
Brite
KEGG Orthology (KO) [BR:
sulz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulz03400
]
C1J03_00310 (addA)
Enzymes [BR:
sulz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1J03_00310 (addA)
DNA repair and recombination proteins [BR:
sulz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C1J03_00310 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
AAA_30
Terminase_6N
DUF3638
DEAD
Motif
Other DBs
NCBI-ProteinID:
AXI44605
UniProt:
A0A345QH18
LinkDB
All DBs
Position
64239..67622
Genome browser
AA seq
1127 aa
AA seq
DB search
MTGLPEWDEATRAQITAARPDMSTWLSANAGSGKTRVLTDRVARLLLDRAEPQRILCLTY
TKSAASEMQNRLFKRLGEWAMLDDEDLGNALRDLGVTQSIPVDQLRRARTLFAQAIETPG
GLKIQTIHSFCASLLRRFPLEAGVSPNFTEVEDRAAELLRAEIVDEMADGVDAALVHDLA
RYFTDENFGKFSQAITSNRELFSNDAPGEKLNEIFDLDPNFDISALPGEVMDQAVSRWMP
EAIGIFEAQTGKLMVSLVEKLKEIDFENPKPNDLRALQDALLTLDRTPRKQIPSKAAKEQ
LGPTLSSFEDLMERTAEAKDQQLRHRNAARTGALQRFATRFISLYEGKKQLRGWLDFDDL
ILRARALLTDPKVAAWVLYRIDGGIDHILVDEAQDTSPRQWDVIEKLAEEFTSGLGARDN
DAARTLFVVGDKKQSIYSFQGADPREFDLKRVMFDESLTAAGLKFQSQSLDYSFRSSSAV
LRAVDQTFDPQINDLMGEKTMHLAFKSALPGRVDLWPLVERPEKEEAEDWSTPLDRRSGQ
HQTVILAEQIAAQINHLVNTENFIPDEDRNRGLIKRRIRAGDFLILVQSRAGVFPEIIRA
CKAAGLPIAGADRLKVGAELAVRDIAALLSFLATPEDSLSLATALRSPLFGWSEQSLFTL
AHRREEKHMWQALRLQEELHPKTLTVLRDLRGQVDFLRPYDLIERILIRHDGRRNLLARL
GPEAEDGIDALLNQALAYERTAVPSLTGFLGWLETDDLEIKRQIDSASDQIRVMTVHGAK
GLEAPIVILPDTVKSNTTIKDEIISLDGVPIWRPNKAETPNIVDQKLQSLKEAQVEEHMR
LLYVAMTRAEKWLIVAGMGPVSDTSDCWYKLVEQAMVHLGAVPLTEKSANILRFEEHVWD
DLPIIVEDSGTEEAPELDTVFGAPLLEALPRETTLSPSELGGAKALAGDDGSDEDTALSF
GSLVHLLLERLPLLPSEMWNDAAQSLVRGADAEMARAALAEVIAVLRDSALSFVFETDAL
AEVAVTATLAGRPMYGIIDRLLISPQRILAIDFKSNRLVPSEASTCPEGLLRQMGAYAQA
LRAIYPNQTIETAILWTRDRSLMALPHDLVTSALARAPDLDATTAGS
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgaccggattgccagaatgggatgaagcgacgcgcgcacagatcaccgcagcacgtcct
gacatgtcaacatggctcagtgcgaatgcggggtctggaaagacgcgcgtgctcacagat
cgggttgcgcgtctgttgttggatcgggctgaaccgcagcgaattctttgcctgacctac
acgaaatcagccgcgtctgagatgcagaaccgtttgttcaagcggctaggcgaatgggca
atgttggacgatgaggatttggggaatgccctgcgtgatcttggcgtaacccagagcatt
ccagttgatcaattgcgccgcgctagaacgttattcgctcaggcaattgaaacgccgggt
gggttgaaaattcaaacgattcactcgttttgcgcgtctctattaaggagatttccactt
gaagcgggggttagcccgaactttaccgaagttgaggatcgcgctgctgagctgttgcgg
gcagagattgttgacgagatggctgatggtgtagatgccgcccttgtgcatgatctggct
cggtatttcaccgacgagaactttggtaagttcagtcaagccatcacatctaacagagag
ctgttttcaaacgatgcgcccggcgagaagctaaatgaaatttttgacctcgatccgaac
tttgacatctccgccctgcccggcgaagttatggaccaagccgtctcgcggtggatgcca
gaggcgatcggcatctttgaggcacagaccggaaagctgatggtctcgctagttgagaaa
ctaaaagagatcgactttgagaatccaaaacccaacgatcttcgcgctctgcaagacgcg
cttcttacgttggaccggacgcccagaaagcaaatcccgtctaaggcagcaaaggaacaa
cttggacctactcttagttcattcgaggatttgatggagcgcaccgcagaggcaaaggat
cagcagctgcgacaccgaaatgctgcccgcacaggtgcgcttcagcggttcgcaacacgt
tttatcagtctctatgaggggaaaaaacaacttcgtggttggctcgactttgatgatctg
atcctgcgcgcgcgggcgttgttgaccgatccaaaggttgcggcttgggttttgtaccga
attgatggcggcatcgaccacatccttgttgacgaggcgcaagacaccagccctcggcaa
tgggatgttatcgaaaagctggctgaggaattcaccagcggcctcggcgcgcgtgacaac
gacgcggcccgtaccctctttgtagtgggagacaaaaagcaatcgatctactcgttccaa
ggtgctgatccacgtgaattcgacctgaaacgcgtgatgtttgatgaaagcttgaccgct
gcggggttgaagtttcagagccaaagtttggattactcctttcggtcatccagcgcggtt
ttgcgagccgtggatcaaacgttcgacccgcagataaacgatctgatgggtgaaaagacg
atgcacttggcattcaaatccgcgctgcctggtcgggttgatctatggccgctggttgag
cgccctgaaaaagaggaggccgaggattggtcgacgccactggaccggcgcagcggccag
caccaaacggtaatcctcgctgaacaaattgcggcgcagatcaatcacttggttaacact
gagaacttcatacccgacgaagatagaaacagaggtttgattaaacgacgcatccgtgcg
ggagatttcctaatccttgttcaaagtcgtgcaggtgtctttccagagattattcgggcc
tgcaaggcagccggactcccgattgcaggtgctgaccgcctcaaggttggggcggagttg
gcggtgcgagacatcgcagcgttgctgtcgtttcttgcaacgcccgaagacagcctttca
ctggccacagccttgcgatcacccctgtttggctggtcggagcaatcgctttttaccctc
gcgcatcggcgtgaagaaaagcacatgtggcaagccttgcgtctgcaagaagaattgcac
cccaaaacgctcacggtgctgcgcgatttacgcggacaggtcgatttcctgcggccctac
gacctgatcgaacgcattttgatccgccatgatggtcggcgcaacctgctggcaaggctc
gggcccgaagcggaagacggcatcgacgcactactcaatcaagcgctcgcctatgaacgt
acagccgtccccagcctaacaggtttcttaggctggcttgaaacggatgatctggaaatc
aaacgacagatcgacagcgcttcagaccagatcagagtcatgacggtgcatggtgccaaa
ggtctggaagcgcccatcgtgatcctgcctgatacggttaagtcgaacaccacgatcaaa
gacgaaattatatctcttgatggggtgccaatctggcggcctaacaaagcggagacgcca
aatattgtagatcaaaagctacaatccctgaaagaggcgcaggttgaggagcatatgcgg
ctcttatacgtcgccatgacgcgggctgaaaaatggctgatcgtggctggaatgggcccc
gtttcagatacatctgactgctggtacaaactagtagaacaggcgatggtgcatcttggt
gctgtcccgctcactgaaaaatccgccaatatactgcggtttgaagagcacgtctgggac
gatttaccgatcattgtggaagactccggtactgaagaagccccagaattagacactgtt
tttggcgctccgctccttgaagccctgccccgagagactaccctttcgccgtcggagttg
ggcggtgctaaagcgcttgccggtgatgacggcagcgatgaggataccgcgctaagcttt
ggtagcctcgttcatctcctcttggagcgcctgccgctccttccctctgaaatgtggaat
gacgctgcgcaatcgcttgtccgaggcgcagatgcggaaatggcccgtgctgcacttgct
gaggtcatcgccgttttgcgggattcggccctatcgtttgttttcgaaaccgatgcgctg
gcagaagtcgccgtaaccgccacgcttgctggacggccgatgtatggcatcatcgacagg
ttgttgatttcgccgcagcgcatattggcgatcgatttcaagtcaaatcgactggtcccg
tcggaggctagcacctgtccagaaggtttgcttaggcagatgggggcctacgcccaagct
ctcagggcaatctatcccaaccaaacaatcgaaaccgcgatcctttggacccgcgatcgc
agcctgatggctttgcctcacgatctggtaacttctgcgcttgctcgtgcgcccgacctt
gacgcaactacggcaggttcttag
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