KEGG   Sulfitobacter sp. SK012: C1J03_02115
Entry
C1J03_02115       CDS       T05563                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
sulz  Sulfitobacter sp. SK012
Pathway
sulz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sulz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C1J03_02115 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sulz03019]
    C1J03_02115 (pnp)
   03016 Transfer RNA biogenesis [BR:sulz03016]
    C1J03_02115 (pnp)
Enzymes [BR:sulz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     C1J03_02115 (pnp)
Messenger RNA biogenesis [BR:sulz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     C1J03_02115 (pnp)
Transfer RNA biogenesis [BR:sulz03016]
 Prokaryotic type
  tRNA degradation factors
   C1J03_02115 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 S1_RRP5 KH-I_KHDC4-BBP BioW
Other DBs
NCBI-ProteinID: AXI44934
UniProt: A0A345QHZ7
LinkDB
Position
complement(443945..446080)
AA seq 711 aa
MFNVTTKSIQWGEETLTLETGKVARQADGSVIATLGETSVMANVTYARTQKPGQDFFPLT
VHYNEKYYAAGKIPGGFFKREARPSEKETLTSRLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDMVAMIAASAALTISGAPFMGPIAACRVGFEGGDYILNPEIDDMQNLRLNPDQR
LDLVVAGTKDAVMMVESEAYELTEEEMLGAVKFAHEQIQPVIDLIIDLAEDAAKEPFDFQ
PVDYSALYKAVQKAGEKEMRKAFAIADKQERTTAVSAARDTIKGKLKEDQLEDANLGSAM
KKLEASILRGDVVKTGKRIDGRKTDEIRDIVSQTGILPRTHGSALFTRGETQGLVVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEVGRVGPPGRREIGHGKLAWRALQAVLPA
STDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKSAVAGVAMGLILEEDGSYA
ILSDILGDEDHLGDMDFKVAGTENGITSLQMDIKIAGITPEIMEKALAQAKEGRIHILGE
MNKALSGAGEFSEHAPRIETMQVPTDKIREVIGSGGKVIREIVEVSGAKVDINDEGIIKI
ASPNGEAIKKAYDMIWSIVAEPEEGAIYTGTVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDERGKVRLSMKIVDQETGEEIKKEEGAEE
NT seq 2136 nt   +upstreamnt  +downstreamnt
atgtttaacgtaacgacaaaatcaatccagtggggcgaagaaacgctgacactggaaact
ggcaaagtggcccggcaagctgacggatcggtcatcgcgacgctgggtgaaacctccgtc
atggccaacgtgacttatgcgcggacccaaaagcccggacaggactttttcccgctgacc
gttcactataacgaaaaatactatgctgccggtaaaatccctggcggctttttcaagcgc
gaggcgcgcccgtcggaaaaagagacgctaacaagccgtctgattgaccgtccaattcgc
ccgctgtttgtccctggcttcaagaacgaagttctggtcatgtgtaccgtactttcccac
gatctggtcaatgaccccgacatggttgcgatgatcgcagcttccgcggcgctgacaatt
tccggggcaccattcatgggcccaatcgcggcatgccgcgtgggctttgagggtggcgat
tacatcctaaaccctgaaatcgacgacatgcagaacctgcgcctgaaccctgatcagcgc
cttgatctagttgttgctggcacaaaagacgccgtgatgatggtcgaatccgaagcttac
gaactgaccgaagaagaaatgctcggtgcggtgaaatttgctcacgaacaaatccagcct
gtcatcgacctgatcattgatctggccgaagatgcagcgaaagagccgttcgacttccaa
ccagtagattattcagctttgtacaaagccgttcaaaaagctggcgaaaaagagatgcgc
aaagctttcgcaattgccgacaagcaagagcgtacgactgctgtttctgcggcccgtgac
accatcaagggcaagctgaaagaagaccagctggaggatgctaaccttggctccgccatg
aaaaagctcgaagcgtccatcctgcgcggtgacgtggtcaaaactggcaagcgtatcgac
ggtcgtaagaccgacgagatccgcgatatcgtgtcccaaacgggcatcttgccccggacc
cacggttccgcgctgttcacccgtggtgaaacgcagggtctggtcgtgaccacgctgggt
accggcgatgatgagcaattcatcgacgcgctgcacggtaacttcaagtcgaacttcctg
ctgcactataacttcccaccctattcggttggtgaagttggtcgtgtgggccctcccggt
cgtcgtgaaatcggccacggcaaactagcatggcgcgcacttcaggccgtcctgccagca
agcaccgatttcccatacaccattcgcgttgtgtccgagatcactgaatcaaacggctcc
tcttcgatggcgtccgtttgtggtggctccttgtcgatgatggatgcgggcgttccgttg
aaatctgccgtagccggtgtggccatgggtctgatcctagaagaagacggatcttacgcg
atcttgtccgacattctgggcgacgaagaccaccttggcgatatggacttcaaagtggcg
gggaccgaaaacgggatcacatcactgcagatggacatcaagatcgcgggcatcacacct
gagattatggaaaaagccttggcacaagccaaagaaggccgcatccatattctgggcgag
atgaacaaagcgttgtctggtgctggtgagttctccgagcacgcgcctcgcatcgagacg
atgcaggtaccaacggataaaatccgtgaagtcatcggttctggcggcaaagtcatccgc
gagatcgtcgaagtctcaggtgccaaagtcgacatcaacgacgaaggcatcatcaagatc
gcaagcccgaacggcgaagccatcaagaaggcctatgacatgatctggtcgatcgtggca
gagcctgaagaaggcgcgatctataccggtaccgtcgtgaaaatcgtcgatttcggtgct
ttcgtgaacttctttggcaagcgcgatggcctggtacacgtgtctcagatcgagaatcgt
cgcctgaaccatccttcagacgttctgaaggaaggccaggaagtgaaggtcaagcttttg
ggctttgatgaacgtggcaaggttcgcctgtcgatgaaaatcgttgatcaagagactggc
gaagagatcaagaaagaggaaggcgcggaggaataa

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