Sulfitobacter sp. SK012: C1J03_03395
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Entry
C1J03_03395 CDS
T05563
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sulz
Sulfitobacter sp. SK012
Pathway
sulz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sulz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C1J03_03395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sulz03021
]
C1J03_03395
03400 DNA repair and recombination proteins [BR:
sulz03400
]
C1J03_03395
Enzymes [BR:
sulz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C1J03_03395
Transcription machinery [BR:
sulz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C1J03_03395
DNA repair and recombination proteins [BR:
sulz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C1J03_03395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AXI45166
LinkDB
All DBs
Position
674525..675541
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPQQLEVKPGNDPARQATVIAEPLERGFGLTMGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIILNLKGVSIRMEVEGPKRLSISAKGPGVVTAGDISE
SAGIEILNRDHVICHLDDGADIYMELMVNTGKGYVSADKNKPEDAPIGLIPIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTMKVETDGSITPDDAVAFAARILQDQLGIFVNFDEPESAS
RQDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDSF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccataaaaattgggccgaattgatcaagccacagcagcttgaagtcaaaccgggt
aacgatcctgcgcgtcaggcgactgtgattgccgaaccgcttgagcgtggttttggtttg
accatgggtaacgcgctgcgtcgcgtgctgatgagctcgttgcagggtgctgcgatcacg
tctgttcagatcgacaacgtgctgcatgaattctcaagcgttgctggtgtgcgtgaagac
gtcactgacatcatcttgaacctcaagggtgttagcatccggatggaagtcgaaggacca
aagcgtctgtcgatctctgcaaagggtccaggcgttgtgacagcaggcgatatctctgaa
tcagccggcatcgaaattctgaaccgcgaccatgtgatctgtcacctcgatgatggtgcc
gacatctacatggagctgatggtcaacactggcaaaggttacgtgtctgcggacaagaac
aagccagaggatgcacccattggtttgatcccgatcgacgcaatctattcgccggtcaag
aaggttagctatgatgtacagcccacccgcgaaggtcaggtgctggattatgataagctg
acgatgaaggttgaaactgatggttctatcacgccggacgacgctgtagctttcgctgca
cgcatcctgcaggaccagctgggcatctttgttaacttcgatgagcctgaatcagcttcg
cgtcaggacgatgacgatggtcttgagttcaacccgcttctgctcaagaaagtggacgag
ttggagctgtctgttcgttcggcaaactgcctgaagaacgacaacatcgtgtacatcggg
gacctcattcaaaagaccgaggccgagatgctgcgcacgccaaactttggccgcaagtcc
ttgaacgaaatcaaggaagtgttgtctggtatgggtctgcaccttggtatggacgtcgag
gattggccacctgacaacatcgaagaccttgccaagaagttcgaggattcgttctaa
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