Sulfitobacter sp. SK012: C1J03_05180
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Entry
C1J03_05180 CDS
T05563
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sulz
Sulfitobacter sp. SK012
Brite
KEGG Orthology (KO) [BR:
sulz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sulz03032
]
C1J03_05180 (ihfB)
03036 Chromosome and associated proteins [BR:
sulz03036
]
C1J03_05180 (ihfB)
03400 DNA repair and recombination proteins [BR:
sulz03400
]
C1J03_05180 (ihfB)
DNA replication proteins [BR:
sulz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C1J03_05180 (ihfB)
Chromosome and associated proteins [BR:
sulz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
C1J03_05180 (ihfB)
DNA repair and recombination proteins [BR:
sulz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
C1J03_05180 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AXI48755
LinkDB
All DBs
Position
1025088..1025372
Genome browser
AA seq
94 aa
AA seq
DB search
MIRSELIQKIADDNPHLYQRDVERIVNTIFDEITGAMSKGDRVELRGFGAFSVKKRDARV
GRNPRTGETVHVEEKHVPFFKTGKLLRDRLNGKS
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtcagaactgatccaaaagatcgcagacgacaatccacatctctaccaacgt
gacgtggagcggatcgtgaatacgatctttgatgagatcactggtgccatgtctaaaggc
gaccgtgtggagctgcgcggctttggcgcgttctcggtaaagaaacgtgatgcgcgggtt
ggacggaaccctcgcactggtgaaacggttcatgtagaagaaaagcatgtgccgttcttc
aagaccggcaagttgcttcgtgatcggctgaacgggaaaagctaa
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