Sulfitobacter sp. SK012: C1J03_17980
Help
Entry
C1J03_17980 CDS
T05563
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sulz
Sulfitobacter sp. SK012
Brite
KEGG Orthology (KO) [BR:
sulz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sulz03009
]
C1J03_17980
Enzymes [BR:
sulz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C1J03_17980
Ribosome biogenesis [BR:
sulz03009
]
Prokaryotic type
ribosomal protein modification factors
C1J03_17980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YicC-like_C
Thioredoxin_6
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AXI47727
UniProt:
A0A345QQZ0
LinkDB
All DBs
Position
3691937..3693322
Genome browser
AA seq
461 aa
AA seq
DB search
MSTNPPNLRPDLAPKVRLDKSSPSDRPGQPTIGMVSLGCPKALVDSERILTRLRAEGYAI
SPDYAGADAVIVNTCGFLDSAKAESLDAIGEALTENGRVIVTGCLGAEPDYITGAHPKVL
AVTGPHQYEQVLDAVHTAVPPSPDPFIDLLPAQAVSLTPRHYSYLKISEGCNHKCKFCII
PDMRGRLQSRPAHAVLREAEKLVAGGVKELLVISQDTSAYGVDIKHAEDRGHRAHITDLA
RDLGSLGAWVRLHYVYPYPHVRQLIPLMADGLVLPYLDIPFQHAHPDVLKRMARPAAAAK
TLDEIDAWRDICPDLTLRSTFIVGYPGETETEFQTLLDWMDEAQLDRVGCFQYENVAGAR
SNDLPDHVAAEVKQERWDRFMEKAQAISEAKLAAKVGKVMDVIIDEIDDEAATCRTKADA
PEIDGNLFIDEGFEGLSVGDIVTVEVEEAGEYDLWGAVKKP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaacccaccaaacctccgcccggatctcgcaccaaaagtgcggctagataaa
tcgtcgcccagtgaccgccccggccagccaacaatcggcatggtgtcgcttggctgtccc
aaggcgttggtggacagcgaacggatcctgacgcgcctgcgcgccgaaggctatgcgatt
tcgccagattatgcgggtgcagatgcggtgatcgtaaatacctgcggtttcctcgacagt
gccaaggccgaaagccttgatgcgattggcgaggcgcttacagaaaatggccgggtgatt
gtgacaggctgcctaggtgcagaacccgattatatcactggcgcgcaccccaaggtgctc
gcggtcacagggccccatcaatacgaacaagtgttggacgcggtccataccgctgtgccg
ccttctccagatcccttcatcgacctgttgccagcacaggcggtcagcctgacgccacga
cactacagttacctcaagatttccgagggctgtaaccacaagtgcaaattctgcatcatc
cctgacatgcgcggccgcctgcaatcgcgccctgcccatgctgtgctgcgcgaagccgaa
aagttggtggcgggcggggtcaaagaactgctggtgatctctcaagacacctcggcttac
ggcgttgacatcaaacatgccgaagaccgtggccaccgggcgcatattaccgatttggcc
cgtgatctggggtctttgggtgcttgggtgcggctgcattatgtctacccttacccccat
gtgcggcagttgatcccgctgatggccgatggccttgtgctgccctatctcgatattcca
ttccagcacgcgcatcctgatgtcctcaaacgtatggcccgccccgccgccgcggccaaa
acgttggacgaaatcgacgcttggcgcgacatttgtccggatctgaccctgcgttctact
tttatcgtcggctaccccggcgaaaccgagaccgaattccagacattgcttgattggatg
gacgaagcgcaactcgatcgtgtcgggtgttttcagtacgagaacgtcgcgggcgcgcgc
tccaatgatttgcccgatcacgtcgccgctgaggtcaaacaagaacgctgggaccgcttt
atggaaaaagcgcaagccatctctgaggcaaagctggccgcaaaggtgggcaaagtgatg
gacgttatcatcgacgagattgacgacgaagcagcgacctgccgaaccaaagcggatgcc
cccgagatcgatgggaatttgtttatcgatgaagggtttgaagggctgtcagttggcgac
atcgtcacggtcgaggttgaagaagccggcgaatacgatctttggggtgctgtgaaaaaa
ccttag
DBGET
integrated database retrieval system
