Sulfitobacter sp. SK012: C1J03_21080
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Entry
C1J03_21080 CDS
T05563
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sulz
Sulfitobacter sp. SK012
Brite
KEGG Orthology (KO) [BR:
sulz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sulz03016
]
C1J03_21080
Enzymes [BR:
sulz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C1J03_21080
Transfer RNA biogenesis [BR:
sulz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C1J03_21080
Prokaryotic type
C1J03_21080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AXI48266
UniProt:
A0A345QSH9
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All DBs
Position
4328116..4329027
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AA seq
303 aa
AA seq
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MGRKRKGRDISGWVVIDKPAGPTSTAVVNKVRWAFDARKAGHAGTLDPDATGVLAVALGE
ATKTVPYITDALKAYVFTVRLGISTNTDDAEGEVLNTSDLRPDDAAIKDALGQFVGDIEQ
VPPQFSAVKIDGERAYKRARDGETMEIAARPLFVESLLLIDRPDADHVTLEMVCGKGGYV
RSIARDLGNVLGCQGHVRELRRTWSGPFEVENALTLAQVEEMARTEALDTHVGPLELGLQ
DLPEVTATAEGTAKLRNGNPGLVFAGDAEYGDEVWASFQGRAIAVGRYKSGELHPSRVFN
QEN
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcaaacgcaagggacgcgatatttcggggtgggtcgtgatcgacaagcccgcc
ggaccgacctcaactgctgtggtcaacaaggtccgttgggcctttgatgcgcgcaaagcg
ggccatgcaggtacgcttgatcctgatgcaaccggagtgctggccgtggctttgggtgag
gcaacaaaaaccgtgccctacattactgatgcgttgaaggcttacgtgtttaccgtgcgg
ctcggcatttcgaccaacacggatgatgcagaaggcgaagttctgaacacatcagacctg
cgcccagacgatgcagcgatcaaggacgcgttgggtcagtttgtcggcgacatcgaacaa
gtccccccgcagttttcagccgtcaagattgacggcgagcgtgcttataagcgtgcccgc
gacggcgagacgatggagatcgcggcgcgcccgctctttgtcgaaagcctgctgttgatc
gatcgtcccgatgcagaccacgtcacgctagagatggtctgcggcaagggtggttatgtg
cgctctatcgcgcgggatttggggaatgtattgggctgtcagggtcacgtgcgcgaactg
cgccgtacttggtcgggccccttcgaggttgagaatgccctgacccttgcgcaggtcgaa
gagatggcgcgcaccgaagcgttggatacgcatgtgggaccgcttgagttaggactacag
gacctgccagaagtcaccgcaactgccgaagggaccgccaagctgcgcaatggcaatccg
ggcttggtttttgcaggcgacgctgaatacggcgatgaggtctgggcctcgttccaaggc
cgcgctatcgcagtgggccgctataagtcaggcgagctgcacccgtcgcgggtatttaac
caagaaaactaa
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