Sulfitobacter sp. SK012: C1J03_23265
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Entry
C1J03_23265 CDS
T05563
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sulz
Sulfitobacter sp. SK012
Pathway
sulz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sulz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1J03_23265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulz03400
]
C1J03_23265
Enzymes [BR:
sulz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C1J03_23265
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C1J03_23265
DNA repair and recombination proteins [BR:
sulz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C1J03_23265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AXI48662
UniProt:
A0A345QTM5
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All DBs
Position
4785503..4786354
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AA seq
283 aa
AA seq
DB search
MPELPEVETVRRGLAPVMEGVVIERADVNRPDLRWPFPTNMAERLSGQKVELLRRRSKYL
LADLSSGETLLVHLGMSGRMLVSGDPLGRFVHEHPPAEKHDHVVFHMQNGTRITFNDPRR
FGAMDLMATEAGATHKLLAVLGPEPLGNDFHEKHLIDALKGRNMPIKSALLDQRIVAGLG
NIYVCEALFRAGISPARKAGQISAQRIGALVPIIRDVLSAAIEAGGSSLRDFRQADGELG
YFQHSFDVYGRENEPCRTVGCTAHISRMVQSGRSSFYCASCQR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgaactgcccgaagttgaaaccgttcgccgaggccttgcgcccgtcatggaaggc
gttgtgattgagcgggcggacgtcaatcgccccgatctgcgatggccctttccaacgaac
atggcagagcgcctgtcgggacaaaaggtcgagcttttgcggcgccgctccaagtatctt
ttggcggatttaagcagtggcgagacgctgctggtgcatttgggtatgtccggtcgaatg
ctagtgtctggcgatccactgggacgttttgtgcatgaacaccccccagcggaaaagcat
gaccatgttgtttttcacatgcaaaacggtacgcggattacatttaacgacccacgccgt
tttggcgcgatggacttgatggcaacggaggcaggtgcaacccataagcttctggcggtt
ttgggaccggagccattgggcaatgattttcatgaaaagcacctgatcgacgcgctcaag
gggcgcaatatgccaatcaaatcggccctgctggatcagcgaatcgtcgcgggattgggc
aacatctacgtttgcgaggcgctgtttcgagcggggatcagcccagcgcgcaaggctggg
caaatttctgcgcagcggattggggcgttggtgccgatcatccgcgacgtcctatcagcg
gcgatcgaggcgggcggctcttcgttacgagattttcgccaagcagatggagaacttggg
tattttcagcactcttttgatgtctacggacgcgaaaacgaaccctgcagaaccgtgggt
tgtactgcgcatatcagtcgcatggtacaatcaggccgctcctctttctactgtgcgtca
tgtcaaagatag
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