Candidatus Karelsulcia muelleri CARI: SMCARI_232
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Entry
SMCARI_232 CDS
T01303
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sum
Candidatus Karelsulcia muelleri CARI
Brite
KEGG Orthology (KO) [BR:
sum00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SMCARI_232 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sum03021
]
SMCARI_232 (rpoD)
Transcription machinery [BR:
sum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SMCARI_232 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
Sigma70_r4_2
AAA_PrkA
FakA-like_C
Motif
Other DBs
NCBI-ProteinID:
ADM90028
UniProt:
E0TJQ1
LinkDB
All DBs
Position
complement(234440..235306)
Genome browser
AA seq
288 aa
AA seq
DB search
MKQLKITKQVTNCESESLDKYLYEIGKIPLLNNEEEIQFAKFARKTYNIKAINFLIKANL
RFVVSVAKQYQNQGLNLSDLINEGNLGLIKGIFRFDERKGFKCISYSVWWIRQSILQAIA
DKSRCVRCPTNKLAFYNKVNKKYSELEQIYQIPPSIKQIGEYLNSNEKEIEEALKNSVKH
TSLDAPIIEGENSNLYDIIKYDESPHPDLDLEKESLKKDIKRLLDTLSEKEAQIITLHYG
LESSTINLEEISFLLNLTRERCRQIEIYGLRRLKQSSRKNILRFYLCT
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacttaaaattactaaacaagttactaattgtgaatctgaatctttagataaa
tatttatatgaaataggtaaaattccattattaaataatgaagaagaaatacaatttgct
aaatttgctcgtaaaacatataatataaaagcaattaattttttaattaaagctaattta
agatttgttgtttctgtagccaaacaatatcaaaatcaaggattaaatttatctgattta
attaatgaaggaaatttaggacttattaaaggaatctttcgttttgatgaaagaaaggga
tttaaatgtatttcttattctgtttggtggataagacaatctatattacaagctatagca
gataaatctcgttgtgtacgttgtcctacaaataaacttgctttttataataaagttaat
aaaaaatattctgaattagaacaaatctatcaaatacctccatctataaaacagattgga
gaatatttaaattcaaatgaaaaagaaattgaagaagctctgaaaaattcagttaaacat
acatctttagatgctcctattatagaaggagaaaattctaatttatatgatatcattaaa
tatgatgaatctcctcatcctgatttagatttagaaaaagaatctcttaaaaaagatata
aaaagattattagatactctttcagaaaaagaagctcaaataataacattacattatgga
ttggaaagttctactattaatttagaagaaatatcatttttattaaatttaactagagaa
cgttgtagacaaatagaaatctatggtcttagaagattaaaacaatcttcacgaaaaaat
attttaagattttatctatgtacttaa
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