| Entry |
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| Symbol |
rpoB
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| Name |
(GenBank) DNA-directed RNA polymerase, beta subunit
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| KO |
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| Organism |
sun Sulfurovum sp. NBC37-1
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:sun00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SUN_0131 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:sun03021]
SUN_0131 (rpoB)
03400 DNA repair and recombination proteins [BR:sun03400]
SUN_0131 (rpoB)
Enzymes [BR:sun01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SUN_0131 (rpoB)
Transcription machinery [BR:sun03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SUN_0131 (rpoB)
DNA repair and recombination proteins [BR:sun03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SUN_0131 (rpoB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
127884..132041
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| AA seq |
1385 aa
MLNSLHSGNRLRVDFSKTPREIEIPNLLQLQQKSYENFLMLGERDRKHSTLERVFRSAFP
IHDQQNRLTLTYKNSEIIKPKYTVRECMERGLTYSVSLKMNIALTIWNRDEKTGEKLDPK
EIKEQAVFVRDIPLMTERTSFVVNGVERVIVNQLHRSPGVIFKEEESTTAGHKLLYSAQI
IPDRGSWLYFEYDAKDILYARINKRRKIPVTILFRALDYTKEDIVKLFYPTKEISIKDNR
FLVKFDPSDFSGRAEYDVKDMDGNVIVNAGKRLTKKKAQQLIENGLEWIEYPLEMLMERH
LATAVIDQESGEVLYDVVAPLDETKLKKMIEQGIESIEIINDLAEGTDKSIINAFIADNE
SLRLLKQTEEIDDENVLSAIRIYKVMRPGEPVTPEAAKSFLRQLFFDPERYDLTEVGRMK
MNHKLGLDIPQYATVLTAEDLINTVKYLIKVKNGHGHIDDRDHLGNRRIRAIGELLGNEL
HNGLVKMQKAIKDKMTTISGTLDELMPHDLVNSKMITNTILEFFSSGQLSQFMDQTNPLS
EVTHKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPIETPEGQNIGLINTLATYSKVN
EHGFIEAPYKVVKDAQVTDEIVYITATQEEDKCIAPASTKVDENGKIVEDLIETRLNGNI
ELNEAKRVDLIDISPLMISGSAAALIPFLEHDDANRALMGSNMQRQAVPLLKTDAPVVGT
GMEAIVSRDAWEAVKAKRAGKVEKVDAKNIYIMGEDETGVFIDHYPLEKNMRTNQNTTFT
QTPIVKLGDVIEVGQVIADGANMDQGELAIGKNIMVAFMPWYGYNYEDAIIVSEKIIRED
TFTSVHTYEKEVEARELKHGTEEITRDIPNIREDELLHLDESGIVQLGTYVKPGMILVGK
VSPKGEIKPTPEERLLRAIFGEKAGHVVNKSLYCPASMEGVVVDIKVFTKKGYEKDARAI
QAYEEEKAILDSDHHDQLLMIDREEILRIAHYLSGQELAKDVTIGDKEYKAGSKIDEETI
KGVNRFALRGVVQSYSDDVQNEYEALKNYFLKQKKRLKNEHEEKLSILEKDDILPSGVTK
LVKIYIATKRKLKVGDKMAGRHGNKGIVSNIVPEIDMPYMEDGRPVEIILNPLGVPSRMN
IGQILEVHLGLVGMRLGEQIQEMFDNKTADFIKELRAKMIEIADVAKLMNAKEVLSQMSD
EELLAYGRDWSRGVKFAAPVFEGTNQTEFDKLFELAKIESDGKMTLYDGKTGEKMIERVN
VGYMYMLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGASHI
LKEMLTIKSDDVEGRARAYRALTKGESVPASGVPETMFVLTKELQALGLDAELYESKKEV
ESEDE |
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| NT seq |
4158 nt +upstreamnt +downstreamnt
atgttaaattctttacattctggtaacagactccgcgttgacttttccaaaaccccaaga
gagattgaaatccccaacctattgcagcttcagcagaaaagttatgaaaactttttgatg
ttgggtgaaagagacagaaaacactctacactcgagcgtgtattcaggtcggccttccct
atccacgatcagcagaacagactgacattgacatacaaaaactcagagatcattaaaccg
aaatataccgttagagaatgtatggagagagggcttacctactctgtatcactgaagatg
aacatcgcactgaccatctggaacagagatgagaagacaggtgaaaagcttgatcccaaa
gagatcaaagagcaggcggtatttgttcgtgacattcctttgatgacagagagaacatca
tttgtcgtcaacggtgtagaaagagtcattgtcaaccagcttcacagatcgcctggtgtt
atcttcaaagaggaagagagtacgacggcaggtcacaagctgctctactccgcacagatc
attcctgacagaggatcatggttgtatttcgagtatgatgcaaaagacatcctttatgca
cgtatcaacaaaagaagaaaaatcccggtaacgatccttttcagagcgctggactatacc
aaagaggacatcgtcaaacttttctacccgactaaagagatcagtatcaaagataacaga
ttccttgtgaaattcgacccgagtgatttcagcggaagagcggaatacgatgtgaaagat
atggatggtaacgtcattgtcaatgccggtaagagactgacaaagaaaaaagcacagcag
cttatcgagaatgggctcgagtggatcgaatatccgcttgaaatgctgatggaaagacat
ttggctacagctgtgatagaccaggaaagcggtgaagtactgtacgacgtggttgccccg
ctggacgagacaaaactcaaaaagatgatcgagcagggtatcgagagtatcgagatcatc
aacgaccttgcggaaggtactgacaaatcgatcattaatgccttcattgcagataacgag
agcctcagactgctcaagcagacagaggagatcgacgatgagaacgttctttctgcgatc
cgtatctataaggtaatgagacccggtgagccagtgactcccgaagcggcgaaatccttc
ctgagacagctcttctttgatccggaaagatatgaccttacagaggtcggtcgtatgaag
atgaaccacaagcttggtcttgacatccctcagtacgctactgtactgacggcagaagac
ttgatcaacacggtaaaatacctgatcaaggttaagaatggccacgggcatatcgatgac
agggaccacctgggtaacagacgtatcagagcgatcggtgaattgcttggtaacgagctt
cacaacggtcttgtcaagatgcaaaaagcgatcaaggataagatgactacgatctccggt
acactcgatgagttgatgcctcacgatcttgtgaactccaagatgatcacgaatacgatc
cttgagttcttctcaagcgggcagttgtcacagtttatggaccagaccaatccactctcc
gaagtaacacacaaaagacgtctttccgcactgggtgaaggcggtcttgtcaaagagaga
gccggatttgaagtcagggatgtgcacccgacgcactacggacgtatctgtccgatcgag
acaccggaaggtcagaacattggtctgatcaacacattggcgacctattcgaaagtaaac
gagcatgggttcatcgaagcaccgtacaaagtggtgaaagatgcgcaggtgaccgatgag
atcgtttacatcacggcgacacaggaagaggacaagtgtatcgcacctgcttctaccaaa
gtagatgagaacgggaagatcgttgaagaccttatcgaaacgagactgaacggaaacatc
gagctgaatgaggcgaaaagagtagaccttatcgatatctctccattgatgatctccggt
tcggctgcggcactcatcccgttccttgagcacgatgatgcgaaccgtgcactgatggga
tcgaacatgcagcgtcaggcagtacctttgctcaagacggatgcgcctgtggttggtacc
ggtatggaagcgatcgtttcacgtgatgcatgggaagcggtcaaagccaaaagagcgggt
aaagtggaaaaagtggatgcgaagaacatttacatcatgggtgaagatgagacaggcgtg
ttcatcgaccattatcctcttgaaaagaatatgagaaccaaccagaacacgacatttaca
cagacaccgatcgtaaaacttggcgatgtaatagaagtcggacaggtgatcgccgacggt
gcgaacatggatcagggtgaacttgccatcggtaagaatatcatggttgccttcatgcct
tggtatggatacaactacgaggatgcgatcatcgtttctgaaaagatcattcgtgaagat
acattcacttcggtccacacctacgagaaagaggtggaagcaagagagttgaagcatgga
acggaagagatcacaagggatatcccgaatatccgtgaagatgaactgcttcacctcgat
gaaagcggtatcgttcagcttggtacctatgtaaaacccggaatgatccttgtcggtaaa
gtctctccaaaaggtgagatcaaacctacgcctgaagagagactcctcagggcgatcttc
ggcgagaaagcgggccatgttgtgaacaagtcactctactgcccggcatctatggaaggg
gttgttgttgatatcaaagtattcaccaaaaaaggatacgagaaagatgcaagagcgatc
caggcctatgaagaggaaaaagcgatccttgactctgatcaccatgatcagttattgatg
atcgacagggaagagatcctgagaatcgcacactacctttcagggcaggagcttgcaaaa
gatgtcacgatcggcgacaaagaatacaaagcaggcagcaagatcgatgaagagaccatc
aaaggcgtgaaccgatttgcgctcagaggtgtggtgcagtcctactccgacgatgttcag
aatgagtatgaagcgttgaagaactacttcctcaagcagaagaagagactcaagaacgag
catgaagaaaaattgagcattcttgaaaaagacgacatccttccttcgggtgtgacgaaa
ctggtcaagatctacatcgcgacaaagagaaagctcaaagtcggggacaagatggcggga
cgtcacgggaacaagggtatcgtttccaacatcgttcccgagatcgatatgccgtacatg
gaagacggaagaccagtcgagatcattctcaacccgctcggggtaccttcgcgtatgaac
atcggacagatcctcgaggttcacctcggacttgtcggtatgagactgggtgagcagatc
caggagatgttcgacaataaaacagcggatttcatcaaagagctcagagccaaaatgatc
gagatcgcagatgttgcgaagctgatgaatgcgaaagaggtcctttcccaaatgagcgac
gaagagcttcttgcctacggtagagactggagcagaggtgtgaaattcgcagcacctgta
tttgaaggtacgaaccagaccgagtttgacaaactgtttgaactggcgaagatcgagagt
gacggtaagatgacactgtatgacgggaaaacaggtgagaagatgattgagcgtgtcaac
gtgggatacatgtatatgctcaaactgcaccaccttgtcgatgagaaagtacacgcacgt
tcaaccggaccatactcgcttgttacacagcagccggtcggtggtaaagcactgttcggt
ggacagagattcggggagatggaagtctgggcgcttgaagcctacggtgcttcccatatc
cttaaggagatgctgacgatcaaatcagatgatgttgaaggtagagccagagcttacaga
gcgctgaccaaaggtgaatccgtaccggcttccggtgtacctgagacgatgttcgtattg
accaaagagcttcaggcacttggacttgacgcagagctatatgagagtaaaaaagaagtg
gagagtgaagatgagtaa |
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