Sulfurovum sp. NBC37-1: SUN_0384
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Entry
SUN_0384 CDS
T00572
Name
(GenBank) ATP-dependent DNA helicase, UvrD/REP family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sun
Sulfurovum sp. NBC37-1
Pathway
sun03420
Nucleotide excision repair
sun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SUN_0384
03430 Mismatch repair
SUN_0384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sun03400
]
SUN_0384
Enzymes [BR:
sun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SUN_0384
DNA repair and recombination proteins [BR:
sun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SUN_0384
MMR (mismatch excision repair)
Other MMR factors
SUN_0384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
CarD_TRCF_RID
eIF3_p135
RNA_binding
Motif
Other DBs
NCBI-ProteinID:
BAF71344
UniProt:
A6Q785
LinkDB
All DBs
Position
complement(391449..393515)
Genome browser
AA seq
688 aa
AA seq
DB search
MEQISNELNPSQREAVEHIDGAMLILAGAGSGKTKTLTARLAYLVGEVGIDPANTLTLTF
TNKAAAEMRERALKLMPTKVSYPPLLCTFHKFGLLFLKFHIEKLGRSNNFVIIDSDDKKR
LLRSIAKELKIDLNLSFIASEISKYKNSLLTPEVVIQKAELPDYKKVARIYEQYQANIEE
NNLVDFDDLLMLTYRILDENEELRRETSNRYKYIMVDEYQDTNELQFRLLEHLCSEHNNL
CVVGDDDQSIYGWRGANIRNILEFADHFENTKTVKLETNYRSTEPILKAANALIEHNSTR
LGKKLVSHKGEGKEIKLLHSLDESMEAKAIAHEIHELIDSGVDPDEIAVLYRINALSRSL
EEGFTKEGLAFKLIGGMRFYERAEIKDIISYFRVLTNPHDDFSLIRIINKPKRGIGKASI
EKLQKAAFDSHLSLYEYIEQSSNGKLPNVVSKKVSAALANLLEDIEVLREEMQTSLGNFI
TLFEERIKLKDHYAAMVDGFDRILNIDEFYGYFRDAVIKNPDLTLEEFLNDISLQSDQDQ
IEENAITIMSIHAAKGLEFEHLFVIGLEEEFFPLLGEGSNMEEERRLGYVAITRAKSDLT
LCYVDSRFYKGRRKMIDKSRFLGEAGLIQDASLKITKQAAFKKGDLVKHKIFGIGRVQAA
TKSGKEYKLLINFGGNKKEILSSFVQSI
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggaacagatatcgaacgaactcaatccctcacagcgtgaagcggtagaacatatagac
ggtgctatgctcatacttgcaggtgccggcagcgggaagaccaaaacactcactgccaga
cttgcctaccttgtcggagaggtcggcatcgatcctgcaaataccctgacattgaccttt
accaacaaggcggctgcagaaatgcgtgaacgtgctctcaaactgatgccgacaaaggtc
tcctaccctccgcttttgtgtacattccataaattcggcctgctctttctcaaattccat
atcgaaaagctggggagaagcaataacttcgtgatcatcgacagcgatgacaaaaaaagg
ctgttacgttccattgccaaagagctgaagatcgacctgaacctctcttttattgcctct
gagatctccaaatacaagaactcactgctcacccctgaggtggtcattcaaaaagcggaa
cttcccgattacaagaaagtcgccaggatctacgaacagtatcaggcaaacatcgaagaa
aataacctggtcgattttgatgatctcctgatgctgacatacaggatcctcgatgagaat
gaagaactcagacgtgagaccagcaaccgctacaagtacatcatggtggacgaataccag
gataccaatgagctgcagttccgcctgcttgaacatctctgttccgaacacaacaacctc
tgtgtggtaggagatgacgaccagagtatctacggctggaggggtgcgaacataagaaat
attcttgaattcgcagatcattttgaaaatacgaaaacagtcaaactcgaaacgaactac
cgttccacagagcccattctgaaagcggccaatgcactcatcgaacacaattctaccagg
ctggggaagaagcttgtttcacataaaggagaaggcaaagagatcaaactgctgcactca
ctggatgagtctatggaagctaaagccattgcccacgagatacatgagctcatcgattcc
ggcgtggaccctgacgagatcgccgtactataccgtatcaatgcactttcacgctcactt
gaagagggctttaccaaagagggacttgcctttaaactcattggcggcatgcgcttctat
gaacgtgcggagatcaaagacatcatctcttatttcagggtattgacgaacccccatgat
gacttctctcttatccgcatcatcaacaagccgaaacgcggtataggaaaagcttccatt
gagaaactgcaaaaagctgcgttcgattcccatctttcactctatgaatatatcgaacag
agtagcaacgggaaacttccgaatgtggtcagtaaaaaagtatcggccgcactggcaaac
ctgctggaggacatagaggtactgcgtgaagagatgcagacctccctgggcaacttcatc
actctctttgaagaacgcatcaaactcaaagaccattatgccgctatggtggacggcttc
gaccgcattctgaacatcgatgagttctacggctacttccgtgacgctgtcatcaagaac
ccagaccttacactcgaagagttcctcaatgacatctccctgcagagcgaccaggaccag
atagaagagaatgccatcaccatcatgagcatccatgccgccaaaggactggagttcgaa
catctcttcgtcatcgggcttgaagaggagttcttcccactgctcggtgaaggcagcaac
atggaagaggagcgtcgtctgggatatgtcgccatcacccgggccaagtccgacctgaca
ctatgttacgtcgacagccgattctacaaaggccgcagaaagatgatagacaaaagccgt
ttcctcggagaagcaggcctcatccaggatgcctcgctcaagatcaccaaacaggccgcg
ttcaaaaaaggcgatctcgtcaaacacaagatcttcggtatcggacgggtccaggctgcg
accaaatcgggcaaagagtataaactgctcatcaatttcggcgggaacaagaaagagata
ttgagttcttttgtgcagtcgatctga
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