Sulfurovum sp. NBC37-1: SUN_0991
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Entry
SUN_0991 CDS
T00572
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase, DEAD-box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sun
Sulfurovum sp. NBC37-1
Pathway
sun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SUN_0991 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sun03019
]
SUN_0991 (deaD)
03009 Ribosome biogenesis [BR:
sun03009
]
SUN_0991 (deaD)
Enzymes [BR:
sun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SUN_0991 (deaD)
Messenger RNA biogenesis [BR:
sun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SUN_0991 (deaD)
Ribosome biogenesis [BR:
sun03009
]
Prokaryotic type
rRNA helicases
SUN_0991 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
GlgB_N
SBF_like
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAF71948
UniProt:
A6Q8Y9
LinkDB
All DBs
Position
complement(1014004..1015482)
Genome browser
AA seq
492 aa
AA seq
DB search
MKFTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIM
SMMKADGSVEGLVIVPTRELAMQVSDELFRFGKLSGLKTATVYGGTAYGKQIERIKQASI
VVATPGRLQDLLMSGKIKLNPHFVVLDEADEMLDMGFLDEIKNIFTFLPKERQTLMFSAT
MPNGIRKLAEQILNNPKTVSITKSESTNSKITQYYYVVQERERDDALVRLIDYKNPEKCI
IFCRMKKEVDRLVAHLTAQGFKVSGLHGDMEQKQREVTIRAFKQGGIDIFVATDVAARGL
DVNDVTHVFNYHIPFDSESYVHRIGRTGRAGKTGEAITLVSPNELRTIKRIEKDVGTKMT
TQVIPTRIEVQNNRNDELIAKIAQTQITDKAIELVKTLQHDLDIVTIAHLLASMVQSEIS
VKGKDNIGLGLEEIELLIERAMQNRGGGGGGRNRGRGGYRGNNRRRSGGGDRNKHGRNGR
SGRNGGQGSNRG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagattttaacctcaaagacaccattcaggctgccgtagcggaagccgga
ttcaaagaaccaagccccgtacagaaagatgccatccctctcgttctcgaaggacacgac
atgatcgcacaggcacagacaggtacaggaaagaccgctgcgttcggcctgcctatcatg
agcatgatgaaagcagacggttccgttgaaggcctggtcatcgtcccgacacgtgaactt
gccatgcaggtgagcgacgaacttttccgtttcgggaagctttcaggactcaaaacagcc
accgtttacggcggtacagcttacggtaagcagatcgagcgtatcaagcaggcttccata
gtagtggctactccgggacgtcttcaggaccttttgatgagcgggaagatcaagctcaac
ccacatttcgtcgttctcgatgaagcagacgaaatgctcgatatgggtttcctcgacgag
atcaagaacatcttcaccttcctcccaaaagagcgtcagacactgatgttctcagcgacc
atgcccaatggcatcagaaaacttgcagagcaaattcttaacaatcccaaaacggtttcc
atcacaaaaagtgaaagtaccaactccaaaatcacacagtactattacgtggttcaggag
agagaaagagacgatgcacttgtcagactcatcgactacaagaacccggaaaaatgtatc
atcttctgccgtatgaaaaaagaggtagacagactcgtcgcgcacctgacagcccagggc
ttcaaggtaagcggccttcacggtgacatggaacaaaaacagagagaagtaactatcagg
gctttcaaacagggtggcatagacattttcgtggcaactgacgttgcggcacgtggtctg
gatgtcaatgacgtcacacacgttttcaactaccatatcccgttcgattccgagtcttac
gttcaccgtatcggccgtacaggacgtgccggaaaaacaggtgaggccattactttggta
agccccaacgaacttcgaaccatcaaacgtatcgagaaagatgtagggacaaaaatgacc
acacaagtcatccctacccgtatagaagtgcagaacaaccgtaacgatgagctcatcgcg
aagatcgcccagactcagatcaccgacaaggcgatcgaactggtcaaaacactgcagcat
gacctcgacatcgtgaccattgcacacctgcttgcctccatggtacagtcggaaatctcc
gtcaaaggaaaagacaacatcgggcttggccttgaagaaatcgaactgctcatcgaaagg
gccatgcagaacagaggcggtggcggtggcggccgtaaccgcggacgcggcggataccgt
ggcaacaacagaagaaggtccggtggcggagaccgcaacaaacacggacgcaacggcaga
agcggacgtaacggcggtcagggcagcaatagaggctaa
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