Sulfurovum sp. NBC37-1: SUN_1187
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Entry
SUN_1187 CDS
T00572
Name
(GenBank) ATP-dependent DNA helicase, UvrD/REP family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sun
Sulfurovum sp. NBC37-1
Pathway
sun03420
Nucleotide excision repair
sun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SUN_1187
03430 Mismatch repair
SUN_1187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sun03400
]
SUN_1187
Enzymes [BR:
sun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SUN_1187
DNA repair and recombination proteins [BR:
sun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SUN_1187
MMR (mismatch excision repair)
Other MMR factors
SUN_1187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
AAA_30
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
BAF72142
UniProt:
A6Q9I3
LinkDB
All DBs
Position
complement(1217250..1219319)
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AA seq
689 aa
AA seq
DB search
MPLSTLNAEQLSAATASLGQNLIIASAGTGKTSTIVGRIAHLLNEGTDPSKILLLTFTNK
AAGEMIARLERYFPKKVVSRIESGTFHAVSYRWLKELHPNLALKQPSELKTLFRSIYEKR
NFERMNLPLAPFSATYLYEMYSLYQNASLEGFDEWFLEKYPDHEVIMDAYMDIVQEFEKE
KIDYGFASFNDLLLRIKSHLEENTIHFEEVLVDEYQDTNTLQGALIDTLKPRSLFCVGDY
DQSIYAFNGANIENIATFSKRYPDANVFTLKTNYRSTAPILSLANRVIERNERIYPKKLE
VGRHGKTHPPRLLMYKDLFEQYQAIAQSIKHTHVPNDNIAVIFRNNSSADGIEASLREVG
IPCKRKGGTSFFDAKEIKFLLDLLSLLVNPKDMMAFIHVFEYASGVGSALSKEFFQCFLH
FGNGNFMQGVLYPVNSELPKLNPNKNVQLGLFDDDHEIGSATRFKHLDLPHSVYGHPLLK
HPKIIQDGVKFFNDFYRLMNEIKSEKNPAKILRTAISSKLYSGIVEMLSTQRGRLKTGEV
DEEKKKVARERILRKANLLLDLSRQYKELGRFVNAMVLGGGELSEGEGVNLLTVHASKGL
EFPEVYVVDLVDGRFPNRKMMSSIEEERRLFYVAVTRAKDKLYLSLAQYDKVKKIDYKPS
QFLHEAGLIKGEFVEPEPKKKRVKKTAEV
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
ttgccactcagcacactcaacgctgaacagctcagcgctgccaccgcatctctgggacaa
aatctcatcatcgccagcgccgggacagggaaaacttcaaccatcgtcgggcgtatcgcc
catcttctaaatgaaggcacggacccttcgaagatccttctgctgacctttaccaacaaa
gctgcaggagagatgatcgcccgtctggagaggtatttcccaaaaaaagtcgtatcgcgt
atcgagtcaggtacgtttcatgccgtctcctaccgatggctcaaagaactgcaccccaac
cttgcgctcaaacagccttcagaactcaaaacacttttcaggagtatttacgaaaaacga
aattttgagcgaatgaacctgcctctggcgcctttttcggccacctacctttacgagatg
tattctctgtaccaaaatgcctcccttgagggattcgatgagtggtttttggaaaagtac
ccagatcatgaagtgattatggatgcctatatggacattgtgcaggagtttgagaaggag
aagatcgattacggttttgcttcgttcaatgacctgctgctgcgtatcaaaagtcatctt
gaggagaacaccatacactttgaagaggtactggtagatgaataccaggacaccaacacg
cttcagggagcgctcatcgatacactcaaaccacgttcgcttttttgcgtcggagattat
gatcagagtatttacgcctttaatggtgcgaatatagaaaatatcgctaccttttccaag
cgataccccgatgccaatgtttttacactcaaaacgaattaccgctctactgcccccatt
ctttctcttgccaacagggtcatagagcgcaacgaacgcatttaccccaaaaaacttgaa
gtagggcgtcacggaaagacccacccgccaagactgctgatgtacaaagacctctttgaa
cagtatcaggctattgcacagagcatcaagcatacccatgttcccaatgacaacattgcc
gtgatcttccgcaacaactcttctgcagacgggatagaagcgagtcttcgtgaagtggga
ataccgtgtaaacgaaagggtggaacaagttttttcgatgccaaagagatcaaatttctt
ctcgatctgctctccctgctggtcaaccccaaggatatgatggcgttcatacatgttttt
gaatatgcatcaggcgtgggttccgcactttccaaagagttctttcagtgttttcttcat
tttgggaacggtaatttcatgcagggggttctctacccggttaattcggaacttcccaag
cttaaccccaacaaaaatgttcagctcgggctctttgacgatgaccatgagatcggttca
gccacgcgtttcaaacatctcgatcttcctcacagtgtttacggccatcctttactcaag
cacccgaagatcattcaggacggtgtaaagttcttcaatgatttctacagactgatgaat
gagatcaaatccgagaagaatcctgccaagattctccggacagccatttcatccaaactc
tacagcgggatcgttgaaatgctctcgacacagagagggcgcctgaaaaccggagaggtg
gacgaagagaagaagaaagtggcacgtgaacgcattttgcgtaaagccaacctgctgctc
gacctttcacgacaatacaaagaattgggccgattcgtcaatgccatggtgctgggcggc
ggagagctcagtgaaggggaaggggtgaatctgctgacggtacatgccagcaaaggcctg
gaattcccggaagtttatgtagtcgatctggtggacggccgttttcccaatagaaagatg
atgagcagcattgaagaagaacgaaggttgttctatgtggccgtcacacgagcaaaagac
aaactctacctttctcttgcccagtacgacaaagtcaagaaaatagactacaaaccttca
cagttcctgcatgaggcagggttgatcaaaggggagttcgttgaaccagagcccaaaaag
aagagggtgaagaaaacggcagaagtttaa
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