Sulfurovum sp. NBC37-1: SUN_1964
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Entry
SUN_1964 CDS
T00572
Symbol
groEL
Name
(GenBank) co-chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sun
Sulfurovum sp. NBC37-1
Pathway
sun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SUN_1964 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sun03019
]
SUN_1964 (groEL)
03110 Chaperones and folding catalysts [BR:
sun03110
]
SUN_1964 (groEL)
03029 Mitochondrial biogenesis [BR:
sun03029
]
SUN_1964 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sun04147
]
SUN_1964 (groEL)
Enzymes [BR:
sun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SUN_1964 (groEL)
Messenger RNA biogenesis [BR:
sun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SUN_1964 (groEL)
Chaperones and folding catalysts [BR:
sun03110
]
Heat shock proteins
HSP60 / Chaperonin
SUN_1964 (groEL)
Mitochondrial biogenesis [BR:
sun03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SUN_1964 (groEL)
Exosome [BR:
sun04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SUN_1964 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SUN_1964 (groEL)
Exosomal proteins of breast cancer cells
SUN_1964 (groEL)
Exosomal proteins of colorectal cancer cells
SUN_1964 (groEL)
Exosomal proteins of bladder cancer cells
SUN_1964 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
divDNAB
Motif
Other DBs
NCBI-ProteinID:
BAF72907
UniProt:
A6QBP8
LinkDB
All DBs
Position
2036145..2037773
Genome browser
AA seq
542 aa
AA seq
DB search
MAKEIFFSDKARNGLFEGVTKLADAVKVTMGPRGRNVLIQKSFGAPHITKDGVSVAREIE
LEDTLENMGAQLVKEVASNTADEAGDGTTTATVLAHSIFKEGLRNITAGANPIEVKRGMD
KASAAIIEELKKISKEVKDKKEIAQVATISANSDETIGNLIAEAMDRVGKDGVITVEEAK
GINDDLEVVEGMQFDRGYLSPYFVTNTEKMTCEMENPLILITDSKITSLKDLIPVLEQIQ
QSGRPLLIISDDLEGEALATLVLNRLKGVLNIAAVKAPGFGDRKKEMLKDIAILTGANVI
TEELGLSLDKATLDDLGQAGRVVIDKDNTVIVDGKGDSAAVDARVAEIKIQVENTTSEYD
KEKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVDEGIVIGGGAALAK
ASKAVKLDLEHDEAVGAEIILRAVYAPMKQIAQNAGFDAGVVADKIANNSEANLGFNAAT
GEYVNMLEAGIIDPLKVARVALQNATSVASLLLTTEATVSDIKEAPTPAPTMPDMGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagagatatttttttcagacaaagcaagaaacggactgtttgaaggtgttacg
aaactggcagatgcagtaaaagtaactatgggaccaagagggcggaatgtactcattcaa
aaaagttttggcgcaccgcacatcacaaaagacggtgtgagcgtggccagagagatcgaa
cttgaggatacactcgagaacatgggtgcgcagctggtcaaagaggtagcgagcaacacc
gcagatgaagcgggtgacggtaccactaccgcaacggtactggcgcactccatcttcaaa
gaaggcctcaggaacatcacagccggcgcgaacccgattgaagtgaagagaggtatggac
aaagcaagtgcagcgatcatagaagagctcaagaagatctccaaagaggtcaaagacaaa
aaagaaatcgcacaggtagcgaccatttccgcgaactctgacgaaactatcggtaatctc
atcgcagaggcgatggacagagtgggcaaagacggtgttatcaccgttgaagaggcaaag
gggatcaatgatgaccttgaagtggtggaaggtatgcagtttgacagaggatatctctcc
ccttacttcgtgaccaatacggagaagatgacctgcgagatggagaatccactgatcctg
atcacagattccaagatcacttctctcaaagatcttattcctgtgcttgagcagatacag
cagagtggaagacctctgctcatcatctccgatgatcttgagggtgaagctctggcgaca
ctggtactcaacagactcaagggcgtactcaacatcgcagcggtcaaagcacctggcttc
ggtgacagaaagaaagagatgctcaaagacatcgctatcctcacaggtgcaaatgtcatc
acagaagagcttgggctcagtctagacaaagcgacactggacgacctcggtcaggcagga
agagtggtcatcgacaaggacaatacagttatcgtagatggtaaaggcgacagtgctgct
gttgacgcaagagtagctgagatcaaaatacaggtcgagaacactacaagtgaatacgac
aaagaaaaactccaggagagactggcaaaactatcaggcggtgtagcagtcatcaaggtc
ggtgcggcgacagagaccgaaatgaaagagaagaaagacagagtggatgatgcactctct
gcaaccaaagcagctgtggacgaaggtatcgttatcggtggtggtgctgcacttgccaaa
gcaagcaaagcagtgaagcttgaccttgaacatgatgaagctgtaggtgcggagatcatc
ctaagagctgtctatgctccgatgaagcagatcgcacagaatgcagggttcgatgcaggt
gtcgtcgcagacaagatcgcaaacaacagtgaggcgaaccttggatttaacgcagcaaca
ggagaatatgtgaatatgcttgaagcagggatcattgatccgttgaaagtagcgcgtgtg
gcacttcagaatgccacttccgtagcaagtctcctgctcacaacggaagcgactgtttca
gacattaaagaagcaccgactccagcaccgacaatgcctgacatgggcggtatgcctggt
atgatgtaa
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