Sulfurovum sp. NBC37-1: SUN_2408
Help
Entry
SUN_2408 CDS
T00572
Name
(GenBank) conserved hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sun
Sulfurovum sp. NBC37-1
Brite
KEGG Orthology (KO) [BR:
sun00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sun01002
]
SUN_2408
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sun01011
]
SUN_2408
Peptidases and inhibitors [BR:
sun01002
]
Cysteine peptidases
Family C82
SUN_2408
Peptidoglycan biosynthesis and degradation proteins [BR:
sun01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SUN_2408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
BAF73344
UniProt:
A6QCY5
LinkDB
All DBs
Position
2502798..2504474
Genome browser
AA seq
558 aa
AA seq
DB search
MKRLQKLIHLLLGTAVISLFLFSGSAAAKTADIAFSEKASDMMIQALKPEPDKSFLKQLY
TELFYLPIWIKKDKPSKVSQELFDIIKSDRSLERTTNLYQNALSLEEEMHQLYDYPSSIV
QKINWEFKMSQLYEEYANYVIYGSINWGALQARLSNLRVSAITAGWITYKPDSSPLQVAE
NAVLMGSLKKAFQEAEPRKYHYRALRKYLDKYIAIKENGGWPTVNIKGVLRPGHRNPAVP
DLRERLLITGDYIPCDESDESDLYDNCLKKAVIRFQKRNGLSAKGVIGKNTLKALNQTVD
ERITIIKINLDRIKWLHERPDNRHIIINIPDYRLYYEVNGKLKMTMKVIVGKRKNPTPIF
SNRVKSVVLNPYWNVPKSIIQKEMIPKLLRNPHAMAGQGIDIYTGWGKDAKKVSGGSVNW
AQYRYSKTVPYRFAQRPGNRNALGRIKFLFPNQFHVYMHDTPTKYLFKRDKRSYSHGCIR
LEKPKLMMETIASFNPSLELDKAYKILKSKKNTYFSLENTIPIDVVYLTAWVDYDGKLQF
RDDVYKYDELMIASVRRW
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcttacaaaaactgattcatctcttgctcggcactgccgtcatctcccttttt
ctcttttcaggaagtgcagcagccaaaacggcggatatcgctttcagcgagaaggcttcg
gacatgatgatccaggcactgaaaccggaacccgacaaaagctttctcaagcagctctat
acagagcttttctaccttcccatctggatcaaaaaagacaagccctccaaagtaagccag
gagctctttgacatcatcaaatctgacagatccctggagagaacgacgaacctctaccag
aatgccctctccctcgaagaagagatgcatcagctctacgactacccaagcagtatcgtg
cagaagatcaactgggagttcaagatgagccagctctatgaagagtatgccaactacgtc
atttacggcagtatcaactggggtgccctgcaggcgaggctctcaaacctgcgtgtctcc
gccatcactgcggggtggatcacctacaaacccgacagcagtcctctgcaagttgcggaa
aatgccgtgcttatgggaagcctgaagaaagcatttcaggaagcagaaccccgaaagtac
cattacagagccctcaggaaatatcttgacaaatatatcgccatcaaagagaacggcggc
tggccgaccgtcaacatcaaaggtgttctccgaccgggccacaggaaccccgccgtaccg
gacctcagagaacgcctgctgatcaccggggactacattccctgcgatgagagtgatgag
agcgacctttatgacaactgtctcaaaaaggcggtcatacgctttcagaaacgcaacggg
ctgagcgccaaaggtgtcataggcaagaacacgctcaaagcactcaaccaaaccgtagat
gaacgtattaccatcattaaaattaacctggaccggatcaaatggctgcatgagcgtccg
gacaacaggcatatcatcatcaacatccccgattaccggctttactatgaagtgaacggg
aaactgaaaatgacgatgaaggtcattgtaggaaaacgtaagaaccccacaccgatcttc
tcaaaccgtgtcaaaagcgtcgtactcaatccctactggaacgtacccaagagtattatc
cagaaagagatgatccccaaactactgagaaatccgcatgccatggcggggcagggtatc
gacatttacaccggatgggggaaagatgccaaaaaggtaagtggaggctcggtcaactgg
gcgcagtaccgctacagcaagaccgttccctaccgttttgcccagagacccggaaacagg
aacgccctggggcgcatcaagttcctcttccccaaccagttccatgtctacatgcacgat
acaccgaccaaatacctgttcaaacgggataaaaggtcctacagtcacggctgcatccgg
ctggagaaacccaagctgatgatggagaccatcgcctctttcaaccccagtctcgaactg
gacaaagcgtacaagatcctcaagagcaagaagaacacctatttctctctggagaacacc
atccccatcgatgtggtctacctcaccgcctgggtcgactacgacgggaaactgcaattc
agggatgatgtctacaaatacgacgaactgatgatcgcttcagtacgtagatggtaa
DBGET
integrated database retrieval system
