Sceloporus undulatus (fence lizard): 121914166
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Entry
121914166 CDS
T07740
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121914166 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sund03021
]
121914166 (CPSF4)
03019 Messenger RNA biogenesis [BR:
sund03019
]
121914166 (CPSF4)
Transcription machinery [BR:
sund03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121914166 (CPSF4)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
121914166 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-C3H1
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
121914166
NCBI-ProteinID:
XP_042293264
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All DBs
Position
8:28290993..28298738
Genome browser
AA seq
269 aa
AA seq
DB search
MQELIANVDHIKFELEIAVEQQLGAQPLPFPGMDKSGAAVCDFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKYGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPTCKFMHPRFELPMGTTEQPP
LPPPTQPQQKQNNNPPLQRSSSLIQLTSLNSSPNQQRTPQVIGVMQSQNNSIGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctgatcgccaacgtcgaccacatcaagttcgagctggagatcgcggtggag
cagcagctgggcgctcagccgctgcccttcccggggatggacaaatcgggagcggccgtc
tgtgatttctttctcaaagcggcctgtgggaaaggagggatgtgtccattccgacacatc
agtggagaaaagacagttgtttgcaaacactggctgcgagggctgtgcaagaagggagac
caatgtgaatttctgcatgagtacgacatgaccaagatgccagagtgctacttctactca
aagtacggggaatgcagcaacaaggagtgccctttcttgcacattgacccagagtctaag
ataaaagattgcccctggtatgatcgaggcttttgtaagcatggtccgctctgcagacac
agacatactcgacgtgttatttgtgtgaattatttggtgggcttctgtccagagggcccc
acctgcaaattcatgcaccctcgatttgagcttcctatgggaaccacagaacaaccacca
ctgcctccaccaacacaaccacagcaaaagcaaaacaacaacccaccattgcagagatca
tcatccctcatccagttaacaagtctgaactcctctcccaaccaacagaggactccacag
gttattggcgtaatgcagtctcagaacaatagtatagggaacagaggtcctcggccgctg
gagcaggtcacgtgttacaagtgcggcgaaaaaggacattatgccaacagatgtaccaaa
ggacatttggcttttcttagtggacaatga
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