Sceloporus undulatus (fence lizard): 121914179
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Entry
121914179 CDS
T07740
Symbol
CHD9
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sund03036
]
121914179 (CHD9)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121914179 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
121914179
NCBI-ProteinID:
XP_042293284
LinkDB
All DBs
Position
8:15914037..15992151
Genome browser
AA seq
2890 aa
AA seq
DB search
MTDPMMDFFDDANLFSDTLEGLSDDAFVQTGPVSLVDELNLGAEFEPLHIDSLNHIQETQ
TQQKMNEFEQLNQYDSLKLQVNQTFNSPAENVLSPHSEFNCSPIHSQSQTNGLFPDVEDG
SPMWGHQTSSSASNQNGSPFHQGHSQSMQQNKSFVAHPDFALYQASEQHHPCASLQSQQN
RNGINTGDDTQNQTENFMEINVSVSHRTSIPHPPQAASLSNSQQSSSVQSFSQTVNDSSQ
FCGNQEGSFDGHSPTITPCSVVNTQFSPPFSYSGNSISPTSLLQSSTALSASQKTRPLAD
FPGNDAFAPQRGTKQGNTDSVLNSSTSLNSNNYQVLHSAHSQGNFSSSKLSVANINFSTT
SGAGPQLRHFNDPVEGNGFSSLDERLLQQVESQAESFTELDPEALLQEELLPPFDASTFV
QDSSGNERKHPLEHHVVPRVTPPSHSTRNKSQNRKHPSYSPGSNQHLHERKRVNAQGQPP
STKKTDGSGTYTKLQNTQVKAVSEKKQKKKVESESKQEKANRIISEAIAKAKERGERNIP
RVMSPENFPSVSAEGREEKKGRKVKSKPKDKESKKPKTSSSSKTKERAKIGKLIITLGKK
QKRKNESSDEMSEVKQPTQQSFKDETSQKRRSNRQIKRKKYAEEGEGKQFEEEAKASAKF
KKSSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISGGVTVEAEEFFVKYKNYS
YLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYIEVDRVLEVSFC
EDKDTGEPVTYYLVKWCSLPYEDSTWELKEDVDQGKIEEFEQLQALRPDSRRLERPPHNS
WKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRQNCILADEMGLGKTIQSITFLYEILL
TGIRGPFLIIAPLSTIANWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIIR
GTYKFKAIITTFEMILGGCPELNAIEWRCIIIDEAHRLKNKNCKLLEGLKLMNLEHKVLL
TGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKE
DVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCC
NHPYLIKGAEEKILGEFRETYSQSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIF
SQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLG
INLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKL
GLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQ
RRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLV
IDTPRIRKQTRPFSATKDELAELSDIESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLLV
YGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQ
TRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDDGYKKHIKHHC
NKVLLRVRMLYYLKQEVIGSECQKVFEGVDASEIDIWVPEPDHSEVPAEWWDTEADKSLL
IGVFKHGYEKYNTIRADAALCFLERVGKPDDKAVAAEQRANDYIDGDVEDPEYKPAPALF
KDDTEDDVSSPGDLVIADGDGQMIEGDKLYWPTQSALTTRLRRLITAYQRTSKNRQIQQI
QPAFPVQPCVMQTPCEDSALNPKIVAKIERQQRWTRREEADFYRVVSTFGVVFDPDRAQF
DWTKFRAMARLHKKTDESLEKYLYAFMAMCRRVCRLPSKDELVDPNIFIQPITEERASRT
LYRIELLRKVREQAVRHPQVFERLKLCQPNPDLPVWWECGTHDWDLLIGAAKHGVSRTDY
HILRDPELSFMSAQRNYSHNKVALSRTPTPLLHQYQMALSASPLAPQARLLDVKGSTLEE
TKAKNENHKEETHSSGEESMSTDDMRTGVKTEPLSPKNSTTVHAVDHKSAVKADNDRRMV
AARTEPLTPNAASKKQRPSKRGSESSSDSDSDSDRSSCSSRSSSSSSSSSSSCSRSRSGS
SSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEAQKRPEGTPHLKAYDEESVAS
ISTVQDETQDSFQMNNGTPNSNCILHGGYMLAASYWPKDRIMINRLDSICQTVLKGKWPS
ARRGYDGNTVASFYTTKLLDSPGAAVDYSEPSLPTPPNADGKEENDQSSQLSKVKTHVRE
KEFTVKINDEGGLKLIFQKQGLPQKRPFESEDGTLGQQQYLARLHELQSASETSLVNFPK
SLPESRTASQSTASANGVITDDQPVLKKRRGRRRNIEGADVLFINKIKAPNHVCHGINAP
QITPGINPVLPYVQSQGLCDAESPVPVINLKDGTRLAGDDAPKRKDLEKWLNEHPGYVED
LGAFIPKMQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLKD
LCRFLKENSEYGVAPEWGDVVKQSGFLPESMFDRILTGPVVREEVSRRGRRPKSEIAKAT
AVATATNIQVNPLLANGLLPGVDLSTLQALQQNLQNFQSLQVTAGLMGMPAGLNTAGEAK
NMATVFPMLLSGVPGLPNLLGMGGLLTKSSESVSEGKKGSDSREPDGKKERTESPNAHNG
GENSVSGSPSTSSSAVAAAASPLALNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFDVQ
NSENNGTGLTKPAEEKEENSRVQDQDVKRGAEASSRNENSTDEGSDKADASSGTDSTSSS
SEDSDSSDED
NT seq
8673 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcctatgatggacttttttgatgatgccaacctatttagtgatactttagaa
ggtttgtcagatgatgcctttgtacaaactggacccgtttcacttgttgatgaattgaac
ctgggtgcagaattcgagcctttgcacattgattcattaaaccatattcaggaaacgcaa
acacagcaaaagatgaatgaatttgaacaactaaatcagtatgattcactaaaactacaa
gtgaatcagaccttcaacagtccagctgaaaatgttctatcacctcattctgagtttaat
tgttcacccattcattctcaaagccaaaccaatggattgtttcccgatgtggaggatggg
agcccaatgtggggacaccaaacgtctagcagtgcttctaatcagaatgggtcccctttt
catcaaggacattcacagtctatgcagcaaaacaaaagctttgtagcacatcccgatttt
gccttatatcaggccagcgaacagcaccatccgtgtgcctcactgcagtcacagcaaaac
agaaatggcattaatacgggagatgacactcagaatcaaacagaaaactttatggaaatt
aatgtgtctgtttcacatagaaccagcatcccccatccacctcaagctgccagtctgtca
aactcacaacagtctagctctgttcagtcattttctcagactgtgaatgactcttcccaa
ttctgtgggaaccaagaaggaagctttgatggacactctccaaccataacaccatgctct
gttgttaatacacagttttctccacctttttcttactctggtaacagcatctctcctacc
agtcttctacagtcttctacagctctttctgctagtcagaaaacacgtcctcttgctgat
tttcctgggaatgatgcctttgcacctcaaagagggaccaagcaaggaaatacagatagt
gtccttaactcaagtacatcactgaattcaaataattaccaggtgttgcattcagcacat
tctcagggcaacttcagtagttcaaaactatctgttgcaaacattaacttttctaccact
tctggtgctggtcctcagctgaggcattttaatgatcctgtagaaggcaatggcttttca
tctttagatgagagattgcttcaacaagttgagtctcaagctgaatcatttacggaactt
gacccagaagctctccttcaggaagaacttcttcctccgtttgatgcatctacatttgtt
caggacagctccggtaatgagaggaaacatcccctggaacatcatgttgtcccacgtgta
acaccgccctcccactccactcggaacaagtctcaaaatcgcaagcatccttcgtattct
cctggttctaatcaacatcttcacgaacgaaagcgtgtaaatgctcaaggccagcctcct
tccaccaagaaaacagatggctctgggacatatactaagttacagaatacccaggtgaaa
gctgtgtctgagaagaaacagaaaaaaaaagtggaatctgaaagcaagcaggagaaagcc
aatcgcataatatccgaggcaatagcaaaagcaaaagagagaggggagagaaacattcca
cgagtaatgagtccggaaaacttcccaagtgtgtcagcagaaggaagagaagaaaagaag
ggcagaaaagttaaatccaaaccaaaagacaaagaaagcaaaaagcccaaaactagctca
tcttccaaaactaaagaacgagcaaaaattggcaagcttataattactctgggtaaaaag
caaaagagaaaaaacgagtcttcagatgaaatgtctgaagttaagcagcctactcagcag
tcattcaaagatgagacctctcagaaaagaagatccaatcgacaaattaaaaggaagaag
tatgcagaagaaggtgaaggaaaacaatttgaagaagaagccaaagcatctgcaaaattt
aaaaagagttctgctcctttgcctgctgaacagcctttacagttatttgtggagaatcca
agtgaagaagatgcagccattgtagataaaattttatcttccagaattgtaaagaaagaa
atttctgggggagtgacagtggaagcagaggaattttttgttaaatacaaaaactactcc
tacctccactgtgaatgggctacagaacaacagcttctaaaggataaaagaatccagcag
aaaatcaaacgtttcaagctgagacaagcacagagagcccatttttttgcagatatggag
gaagaaccattcaatcctgattatattgaagtagatcgggtgttagaagtctccttttgt
gaagataaggacactggagagcctgttacttactacttggtaaagtggtgctcactgcca
tatgaagacagcacttgggagctaaaagaagatgtagatcaaggaaaaatagaagagttt
gaacaactgcaagctttaaggcccgattcaaggcgattggaacgaccgccccataattca
tggaagaagatagaacaatccagggagtataaaaatggcaatcaactcagggaataccag
ctggaagggctcaactggctcctcttcaattggtataataggcaaaactgcattttagca
gatgaaatgggtcttggcaaaaccatccaatcaataacattcctctatgaaattcttctg
actggtataagagggcccttcctgatcatagctccactttccaccatagccaactgggaa
agagagttccgcacatggactgatcttaatgttgtagtatatcatgggagcatgattagt
aggcagatgatacagcaatatgagatgtatttcagggactcacagggccgaatcattaga
ggtacatacaagttcaaggctataattaccacttttgaaatgattcttggtggctgtcca
gaactcaatgcaattgaatggcggtgtattattattgatgaagcacatcgattgaagaac
aaaaactgcaaacttttagagggcctgaagcttatgaaccttgagcacaaagtactgttg
acaggcacaccattgcaaaatacagttgaagaacttttcagcctccttcacttccttgaa
ccattacgtttcccggcagaatctacattcatgcaggaatttggagaccttaaaacagag
gagcaggtgcaaaagctgcaagctatcctgaaaccaatgatgctgagaagactaaaagaa
gatgtagagaagaagttggctccaaaagaagaaactatcattgaagtggagttaacaaac
atccagaaaaaatattatcgagctattttagagaaaaactttgcatttttgtcaaaagga
gcagggcaagccaatgtacccaatttagttaacactatgatggaactcaggaaatgttgc
aatcatccatatcttatcaaaggtgctgaggaaaaaatcttaggagagtttagggagacc
tacagtcaatctgctcctgattttcatctgcaagcaatgatccagtctgctgggaaactg
gtcctcattgataaacttcttccaaaaatgaaagcaggaggccataaggtgcttatattc
tcccagatggttcgttgtcttgatatccttgaagattatcttatacataaaaggtacctt
tatgagcgcattgatggaagagtacgaggaaacctgaggcaggctgctattgaccgattt
agcaagccagactctgatcggtttgttttccttctctgtaccagagctggtggattgggc
attaatttgactgcagctgatacttgtataatttttgattctgactggaatcctcagaat
gatttgcaggcccaagctcgatgccataggattggtcaaaacaaagcagtaaaagtctac
agattgattactcggaactcttacgaaagagaaatgtttgacagagcaagtttgaagctt
ggcttggataaggctgtcttacagagcatgagtggaagagaaaatagtgttggtggaatc
cagcaactttccaaaaaggaaatagaggatttgcttcggagaggtgcatatggtgccata
atggatgaagaggatgagggctctaaattctgtgaagaggatattgatcagattttacaa
cgtcgcacaaaaactatcacaattgaatctgagggaaggggttccacatttgctaaggct
agttttgttgcatctggaaacaggacagacatttctttagatgaccccaacttctggcag
aaatgggccaaaaaagcagaaatagacattgatgccatcagtggtagaaacagcctggtt
attgacactcccagaattagaaaacagacaagaccgtttagtgccacaaaggatgaactt
gctgagttatctgacattgaaagtgaaggggatgaaaaaccaaaacttcggaggccttgt
gaccgttccaatggatatgggagaacagaatgctttagagtggagaaaaacctactggtt
tatgggtggggtcgttggagagagattttgtcgcacggacgcttcaagagacaactgaat
gagcaagatgtggaaatcatttgccgcgcactcctagcatattgcctcgttcactacaga
ggagatgaaaaaattaaaagttttatttgggacctcattacaccaactgaggatggacaa
acacgagagctacagaatcacctaggcttgtcagctcctgtcccccgtggtcgaaaagga
aagaaagttaagactcaggccagcacttttgacatacataaagcagaatggcttcgaaaa
tacaatccagagcatttgttgcaagatgatggctataaaaaacacataaaacaccactgc
aataaagtcttacttcgagttagaatgctgtattacctgaaacaagaagtcattggtagt
gagtgccagaaggtttttgaaggagttgatgccagtgaaattgatatttgggtccctgag
ccagaccattctgaagtgccagcagagtggtgggatacagaagcagacaagtctctacta
attggagtttttaaacatggttatgaaaagtacaacacaatcagagcagatgcagctctc
tgctttttggaaagagtaggaaaacctgatgataaagcagttgctgctgaacaaagagca
aatgattacattgatggtgatgtagaagaccctgagtacaaaccagctccagcattgttt
aaagatgatacagaggatgatgtgtcatcaccaggagatcttgtaatagcagatggagat
ggtcagatgatagaaggggacaagctttactggccaactcagtctgccttgacaacacgc
ttgcgtcgcttaataactgcatatcagcgtactagtaagaacaggcaaatccagcagatc
caaccagcatttccagttcaaccctgtgtaatgcagactccatgtgaagattctgctttg
aatccaaaaattgttgccaaaattgaaagacaacaaaggtggacaagaagagaagaagct
gatttctacagagttgtttcaacttttggtgtagtgtttgatcctgacagagcccagttt
gactggacaaagtttagagccatggctaggctgcataagaaaacagatgagagtttagag
aagtacctatatgcatttatggccatgtgcaggagagtttgtcgcctaccttcaaaagat
gaacttgtggatccaaatatttttattcaaccaataactgaagagcgtgcatctcgaact
ttgtatcgtattgaacttctcaggaaggtacgagaacaagctgtacgtcatccgcaggta
tttgagcgattaaaactttgtcagccaaatccagacttgcctgtttggtgggaatgtggg
actcatgactgggatttactcatcggagctgcaaaacatggggttagcaggactgactac
cacatccttcgtgatcctgaactttcatttatgtcagcccagaggaactacagtcacaat
aaagtagcactttcaaggactccaaccccacttctgcatcagtatcaaatggcactgtct
gcatctcctcttgcccctcaggcaaggctgctagatgttaaagggagtacacttgaggaa
acaaaagctaagaatgaaaaccataaagaagaaacccattcttcaggagaggagtctatg
tctactgatgatatgcgaacaggagtaaagactgaacctttgagcccaaagaatagcaca
acagtacatgctgtagaccataaatctgctgtgaaggcagataatgacagacgcatggtt
gcagcaagaacagagcctttaactccaaatgctgcttccaaaaaacagagacccagcaag
agaggatcagaatccagctccgattcagactctgattcagacagatcatcttgttcttcc
aggtcatcatcctcttcctcttcttcttcatcctcttgttcacgttccagatcaggctcc
agttcttcatcctcttcgtcttgttcttcagcatcatcctcatcctcgtcctcctcttca
tcgtcgtcgtcatcatcatcttcgtcatcagaagagagtgacagtgaggaggaggaggca
caaaagaggccagaaggaactcctcacttgaaagcatatgatgaagagagtgtagcttcc
ataagcactgtacaggatgaaacgcaggacagtttccaaatgaataatggaacgccaaat
tctaactgtatcttacatggtggatacatgttggctgcttcctactggcccaaggatcgg
attatgattaaccgtctggatagtatttgtcaaacagtcttgaaaggtaaatggccttct
gcaaggagaggttacgacggcaatactgtagcttccttctataccaccaaacttctagac
agtcccggtgccgctgtggactacagtgaacctagtctaccaactcccccaaatgcagat
gggaaagaagaaaatgatcagtcatcacagttgtcaaaggtgaagacgcatgtacgggaa
aaggagtttacagtgaaaatcaatgacgaaggtggtttgaaattaatttttcagaagcaa
ggacttcctcagaaaaggccatttgaaagtgaagatggcacattaggacagcagcagtac
cttgccaggctacatgaacttcagagtgcttcggaaaccagccttgtcaattttccaaag
tctttgccggagtcaagaactgcaagccaatcaactgctagtgcaaacggtgtaataact
gatgaccaacctgtattgaaaaagaggagaggaaggagaaggaatatagaaggagctgat
gtcctctttataaacaaaatcaaagcacctaaccatgtttgtcatggcattaatgccccc
cagattactccaggaataaacccagtacttccttatgtacaatcccaaggcctttgtgat
gcagaaagcccagttccagttattaacttgaaagatggaacaaggcttgcgggtgatgat
gcccccaagagaaaagatttggagaaatggcttaatgaacatcccggctatgttgaagac
ttaggagctttcattccaaaaatgcagcttcatgaggggagacccaaacaaaaaaggcac
cgttgtcgcaatcctaataagttggatgttaatagccttactggggaagaacgtgttcag
ctgatcaatagaaggaatgctagaaaggtaggaggtgcttttgctcccccattgaaagat
ttgtgtcgattcctcaaggagaattctgaatatggagtagctcctgaatggggtgatgtt
gtgaaacagtcgggatttcttcctgaaagcatgtttgaccgtatcctcacagggcctgtt
gtacgagaagaagtgagcaggagagggagaaggccgaaaagcgagattgccaaggccact
gctgtcgcaacagcaacaaacatacaggtcaaccctttgctagccaatgggctactccca
ggagtggatctctctactctccaggccttacagcaaaacctgcagaattttcagtcattg
caagtgacggcgggtttaatgggaatgcctgctggtctgaacactgctggagaggcaaaa
aacatggcgacggtgttccccatgctgctgtcaggagtgccgggcttaccaaatttgcta
ggaatgggaggactcctcacgaagtcttcagaatctgtttctgaggggaaaaagggaagc
gattccagagagcctgatggaaagaaagagaggacagagagcccaaatgcacataatggt
ggggaaaactctgtatctggttctccttctacatcgtcatctgctgttgctgcagctgca
agccccttagctcttaaccccttactgttgtccaatatactttatccagggatgcttctc
actccaggccttaatcttcatatcccagctttgtcccagtcaaacatttttgatgtacag
aacagtgaaaataacggcactggcttgactaagcctgcggaagaaaaggaagaaaactct
agggttcaagaccaagacgtcaaaaggggagcagaggctagttctcgcaatgaaaacagc
acagatgagggttcagataaagcagatgcttcctccggaacagacagtacatcatcctct
tctgaggattcagattctagtgatgaagactga
DBGET
integrated database retrieval system
