Sceloporus undulatus (fence lizard): 121914209
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Entry
121914209 CDS
T07740
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03420
Nucleotide excision repair
sund03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
121914209 (ERCC4)
03460 Fanconi anemia pathway
121914209 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sund03032
]
121914209 (ERCC4)
03400 DNA repair and recombination proteins [BR:
sund03400
]
121914209 (ERCC4)
DNA replication proteins [BR:
sund03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
121914209 (ERCC4)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
121914209 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
121914209
NCBI-ProteinID:
XP_042293361
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All DBs
Position
8:34505629..34529575
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AA seq
866 aa
AA seq
DB search
MAAWVSLEHENQVFLELFGQDGLVVCARGLGIDRLLLRFLRLYCDPARLVLVLNTSPAEE
EFFIDQLRIDNVVHLPRRVTNEIASKARYEVYTQGGVVFATSRILVVDFLTDRIPSDLIT
GILVYKAHRIIESCQEAFILRLYRQKNKQGFVKAFTDNAVAFNTGFCHVERVMRNLFVRK
LYLWPRFHAVVHSFLEQHKPEVVEMHVTMTPAMRAIQSSILDILNACVRELKHCNPALEA
EDLSLENAIGKAFDKTIRHYLDPLWHQLGTKTKSLVQDLTVLRTLLWYLTQYDCVTFLNL
LESLRASEKAFGRNSGWLFLDSSTSMFLNARSRVYCLTDGNGNKKRKISEKTDVKEENEQ
KRELVLESNPKWEALRNVLKEIEMENANSDALGGPGRVLICASDDRTCAQLKEYITTGAE
AFLMRLYSKTFGKCKDGPDDCLKGRQGAKCQGDNPREPCSKEAKKESSKSRKRKMKAALT
LTQMLSKEEQTNIMEEQEDSNELNSSDETKPDDLHLNLSSSDVFYGILKEPLTVIHPLNG
GGDPYALTRILHEVEPRYIVLYDAELTFVRQLEIYKASRPGMPLREKASMVIPEEREGRD
ETCLDLGRNATPAAISTDTRKAGGQEQKEVQQSIVVDMREFRSELPSLIHRRGIDIEPVT
LEVGDYILTPDICVERKSISDLIGSLNNGRLYSQCISMSRYYKRPVLLIEFDPSKSFSLT
PRASLYQEISNNDITSKLTLLTLHFPRLRLLWCPSPYATAELFEELKQNRPQPDAATAIA
ITADSENLPELDKYNSGPQDFLLKLPGVSTKNCLAIMNHVKSIAELITFSQDKLAELLGN
TASAKQLYEFIHLPFTEAVSQGKIKR
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttgggtgtctctggagcacgagaaccaggtcttcctggagctcttcggccaa
gacgggctggtcgtctgcgccagaggcctcggcatcgaccgcctcctcctccgcttcctg
aggctttattgcgacccagccaggctggtcctggtcctcaacaccagccctgcagaggag
gagttttttattgaccagctaaggatcgataacgtagttcatcttcctcgccgtgtcaca
aacgaaattgcaagcaaagctcgctacgaagtttacactcaaggaggagtcgtctttgca
accagccgaattctggtggtggattttctgacggatagaataccttcagatcttatcact
ggcattttggtgtacaaagcccatcgaatcattgaatcttgccaagaagcttttatctta
cgactgtatcgccagaagaacaagcagggcttcgtcaaagccttcacggataatgctgtt
gcttttaatactggcttttgtcacgtggaaagagtgatgagaaatctctttgtgaggaaa
ctttacctctggccaagatttcatgctgtggtgcactcctttttagagcagcacaagcct
gaagtggttgagatgcatgtcaccatgaccccagccatgcgtgccatccagagttccata
ctggacatcctgaatgcatgtgtacgggaactgaagcactgtaaccctgctctggaagca
gaggatttatcactagaaaatgctattggcaaggcatttgacaagacaattcgccactat
ttagatccactttggcaccaacttggaacgaaaacaaaatctttggtccaagacttgacc
gtcctccgtactttgctgtggtatttgactcagtacgattgcgtcactttccttaacctt
ctagagtccttacgagcgtctgaaaaagcctttggtcgcaattcaggttggctttttctt
gattccagtacatcaatgtttctaaatgctcgatccagagtttattgtcttaccgatggt
aatggaaataagaaaagaaaaatctctgaaaaaacagatgtaaaggaagaaaatgaacag
aaaagggagctggtcttggaaagcaacccaaagtgggaggcactcaggaatgtgctgaag
gagattgaaatggagaacgcaaacagtgacgctctgggtgggccagggcgagtgcttatc
tgtgccagtgatgaccgcacttgtgctcagcttaaagagtacatcacaactggagctgaa
gcttttttaatgaggctttacagcaaaacatttggaaagtgcaaagatggacctgatgac
tgcctcaagggcagacaaggagctaagtgccagggagacaatcccagggaaccttgctcc
aaggaagccaaaaaagaatcttctaagtcaaggaagaggaaaatgaaggcagcactcacc
ttaacacaaatgttaagcaaagaggagcagacaaacatcatggaggagcaagaagactcc
aatgaattaaatagcagtgatgaaaccaaacctgatgacctccatctgaatttgtcttcc
tcagatgtcttttatgggatcttaaaggaaccactaactgttattcatccattgaatggg
ggtggagacccttatgccctcactcgcatcttacacgaggtggaaccaagatacattgtg
ctgtatgatgcagagctcacatttgttcgccagctggaaatttacaaggcaagcagacct
gggatgcctttgagagagaaggctagcatggttatccctgaggaaagagaaggtagagat
gaaacttgtttggatctgggaagaaatgctactccagctgctatttctacagacacccga
aaagcaggtggccaggaacagaaagaagtacagcaaagcattgttgtggacatgcgtgaa
tttcgcagtgagcttccatctttgatccaccgtcgtggcattgatatagaacctgtgacc
ttggaagtgggcgactacattctcacacctgacatttgtgtggaacggaaaagtatcagt
gatctaattggctccctgaataatggaaggctgtattctcagtgcatctccatgtctcgg
tattataagcggcctgtccttctcatagagtttgaccccagtaaatccttttctctcact
cctcgggcttctctgtatcaggagatatctaataatgacattacttccaaactcactctg
cttacccttcatttcccccggcttcgtctcctttggtgtccctctccttatgccactgct
gaattatttgaggaactgaagcaaaaccgaccccaacctgatgcagcaacagccatagct
atcactgcagattcagaaaacctccctgaattggacaaatacaactcaggcccccaagac
ttccttctgaaacttcccggtgtgagtaccaaaaactgcctggccataatgaatcatgtt
aagagtattgcagaactcataactttttctcaagacaagctggctgaactcctgggcaat
actgccagtgccaagcagctttatgaattcatccacttgccctttacagaagcagtttct
caaggaaaaataaagaggtga
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