Sceloporus undulatus (fence lizard): 121914225
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Entry
121914225 CDS
T07740
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sund03036
]
121914225 (TDRD12)
Enzymes [BR:
sund01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
121914225 (TDRD12)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Gene silencing
piRNA pathway
121914225 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
CS
Motif
Other DBs
NCBI-GeneID:
121914225
NCBI-ProteinID:
XP_042293397
LinkDB
All DBs
Position
8:complement(9782044..9817049)
Genome browser
AA seq
1280 aa
AA seq
DB search
MIEVFIMKIENPGCFWVGIKGGGNFVENEMEYKKLQSYMNQFYNKYYRCMDEIKPSVLEE
GQVCAVYYQEQKSWCRAIVKSIISCTDYYLAECFLVDYAKSIPVKKEKICVALESFMKLP
YRAKKFRLYCTKPVTLCFNYYNDNAETVPAAKWDIAAIQYFQNLFNETTQVEAKLCSVED
DTFDVYLYVTVNGEKVCVNDDLIAKNFACYGTNERTFRIINDQTPKMLNHKSLSATENIS
PASILWPKLLNVEESKALEVSHPAEKATSNILPETASYSKGAVMAIPPFKQGITVSVTDL
PTDSTTCEKTTCIKERKENLHEENITMKLLQFLNPEPLKSKNRQDEEEEHQLNINTHIPV
VLSNKIEPCSSLENAPLFPALKKDLLRNHFVGPSHVQSYSWPAIARGCDSVVICPENDPL
IYLLPIITFLQSKGCYLSLPARNGPIALIICPGQRKAELVFELLQKYSHCSRPLHPILLL
LGMNKEEIKSMKIPRVCEVIVTTPHSLLRLLEYDSLLFLRLCHLVFDEADVLFSEASHQV
FNILEYYKTNLNVEGKEFVPQQIVAVGSRWIKDIEYLIKEFMNDPYIVITSLEEAAIYGK
LQQVVLVCLECNRISTLLQTMDFTPTNAQKTLIFTSSVKEIDAVYKAVESTSVFCLKIHP
ETGFHVTHVVEQWNKRFSSGTHIVLVLTDECLPALGITDATCVIHFSFPASPRIFGARLY
SMSDHFQNSIEKVSPLVKEQSKAKSILLLTENNSCHAVGILHYLKRTAADIPPELSDFTS
GVLETREDSKTGKPLCHCLKLYGFCKDKNRCPDRHRISLPADLPRKVTDDVLPKAGNITI
LPLFIVDATNYFGRIVDKTKNPYTTLAEEMSQYYTKAGKCRSVDTVEEHALYGLHEANSF
HRIQVLEVLSQEEKNMFYRVHIKYIDEGRTGQVQRYKLLYLPEQFQSLPPQAVEFIVCRV
KPIDNEVDWNPKVTRYINYKISGKPHEAKIVLALNNTIWVDPVVRVTRLPDLKTSINEYS
IRSEILATGLGVDNPEHIHELQRLFRDAETACEKKDSPALNQSLKCETSEQATSSPSILD
QATHSSETTEEQVVSNVQEGDAIIDSCSQVTLQNHSNGMVQSEKECESLQPPNECFHPAI
QWFEKQDFVILKIKVQNITSHSCKFFTQRIIFSGSAEGKFYWADMELKENIIEEKSSCVL
KSNEAVITLAKEKEGSWCHLLKQKNPHVSFDFDHLEDSEERSTFPSGTATKRRHKTGNVV
CEKEHESFQHSDTDSDSSTD
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagtcttcataatgaagattgaaaatccaggctgcttttgggtcggcataaaa
ggaggtggaaattttgtagagaacgaaatggaatataaaaagcttcagtcttacatgaat
caattctataacaaatattatagatgcatggatgaaatcaaaccatcggtattggaagag
gggcaggtttgtgctgtttattatcaggagcagaaatcctggtgcagagctattgttaaa
tcgataatttcatgtacagattattaccttgcagaatgtttccttgtggattatgccaaa
agcattcctgtgaaaaaagaaaagatttgtgttgccttagaatcgtttatgaaattgccc
tacagagcaaaaaagtttagattatactgtacaaaaccagtaacattgtgtttcaactat
tacaatgacaatgcagagacagtccctgctgccaaatgggatatcgctgctatccagtat
tttcaaaacctcttcaacgaaactacccaagtggaggccaagttatgttctgttgaagat
gacacttttgatgtctatctttatgtcacagtaaatggtgaaaaggtgtgtgtgaatgat
gatcttattgctaagaactttgcttgttatgggacaaatgagagaacatttcgtattata
aatgaccaaactcccaaaatgttaaatcacaagtctctctcagccacagagaacatcagt
cctgccagtattctatggccaaagttgctgaatgttgaagaatccaaggctcttgaagtg
tctcatcctgctgagaaagcaacaagcaacattctaccagaaactgcctcatatagtaaa
ggtgctgtgatggctattcctcccttcaaacaaggtataacagtttctgtaacagatctg
ccaacagacagcaccacatgtgagaaaactacttgtataaaggagaggaaagaaaatctt
catgaagaaaacattactatgaagcttcttcagtttttaaaccctgagcctttgaaatct
aagaatagacaagatgaggaagaggagcatcaactgaatattaatacacacattccggtt
gttcttagtaataaaattgaaccatgctcatctcttgaaaatgcaccactgtttcctgct
ctaaaaaaggatcttctgaggaaccattttgtaggtcccagtcatgtgcagtcgtattcc
tggccagcaatagctcgtggttgtgattcagtagtcatctgtcctgaaaatgacccactt
atttatctgctgccaattattacatttctgcagtcaaaaggttgctacctatctttacca
gccaggaatggtccaatagcattaatcatatgtcctggacaaaggaaagcagaactagtt
tttgagcttctgcagaaatacagtcattgctccaggcctcttcatccaatattgctgtta
ctgggaatgaacaaagaagaaatcaagagtatgaaaattcctagagtatgtgaagtaatt
gtaacaactccacatagccttttgcgattgcttgaatacgatagcttactgttccttagg
ctgtgtcatcttgtgtttgatgaagctgatgtactgttctctgaagccagccatcaagta
tttaatatattagaatattacaaaacaaatttgaatgttgaagggaaggagtttgtgccg
caacaaattgttgctgttggaagccgctggatcaaagatatagaatatttaattaaagag
ttcatgaatgatccatatattgtgatcacatccttggaagaagctgcaatatatgggaaa
ctacagcaggtcgtactggtttgccttgaatgtaaccgaatctcaactttacttcaaaca
atggattttactcctactaatgctcagaagacattgattttcacaagttctgtaaaagaa
atagatgctgtttacaaggcagtagagagcacttcagtattttgcttgaaaatacatcca
gaaactggatttcatgtcactcatgttgtagagcagtggaacaaaagatttagctctggc
acacatattgtattggttctaacagatgaatgcttgccagccttaggaattacagatgca
acgtgtgtcattcatttcagttttcctgcatctccaagaatctttggtgcacgcttatac
agcatgtctgatcatttccaaaactcaatagaaaaggtttcacctctagtaaaagagcaa
tcaaaggcaaaatccatcttactgttgacagaaaataattcatgccacgccgttggaata
ttacattatttaaaacgcacagcagccgacattccacctgaattaagtgattttacatct
ggagttctggagactagagaagatagtaagactgggaagcctctttgtcactgcctaaaa
ttatatgggttttgcaaggataaaaatcgttgcccagatagacatcgaattagtttacca
gcagatttgcccagaaaagtaacagatgatgttctaccaaaagctggaaatataactata
ctgcctctttttatcgtggatgccacaaactactttggccgcatagtagataaaacaaag
aatccctatactactctggcagaagagatgagtcaatattatacaaaagctggcaaatgc
agatcagttgatacagtggaggagcatgccttgtatggattacatgaggcgaattctttt
cacaggattcaggtgttggaagtgttatcacaagaagaaaaaaatatgttttatagagtg
catatcaagtatatagacgaaggcagaacgggtcaagttcaacgttataagttgctttac
ttaccagagcaatttcaaagcttgccccctcaagctgtggaattcattgtctgtagggtt
aaacccattgataatgaagtagactggaacccaaaggttactagatacataaattacaag
attagcggaaagccacatgaagcaaagatagtacttgctctgaacaatacaatttgggtg
gatccagtggttcgagtcaccaggcttccagatctgaaaacatctatcaatgaatacagt
attcgctctgaaatcctagctacaggattgggagttgataatcctgaacacatacatgaa
ctccaaaggttatttagagatgctgaaacagcctgtgagaaaaaagactctcctgcatta
aaccagtctctgaagtgtgaaacaagtgaacaggccacatcttcaccgagcatcttagac
caggctactcacagttcagagaccactgaggaacaagtcgtgtccaatgttcaagagggt
gatgctattattgatagttgctctcaagtaactttgcaaaaccattctaatggaatggtt
caaagtgaaaaagaatgtgaatctctccaacctcctaatgaatgcttccacccagcaata
caatggtttgaaaaacaggattttgttattctgaagataaaagtacaaaatatcactagt
cacagctgcaagttttttacacagaggatcattttcagtggttctgcagaaggcaagttt
tattgggctgatatggaactgaaagaaaatataattgaagaaaaatcgagttgtgtgctt
aaaagtaatgaggctgtaattacccttgcaaaggaaaaggaaggatcttggtgccacttg
ctgaaacagaagaacccacatgtatcttttgactttgatcacttggaagattctgaagaa
agaagcactttccctagtggcacagctactaagagaagacataagactggtaacgtggtc
tgtgaaaaggaacacgaatcctttcagcacagtgatacagatagtgattcgtccactgat
taa
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