Sceloporus undulatus (fence lizard): 121914278
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Entry
121914278 CDS
T07740
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121914278 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121914278 (GSPT1)
03012 Translation factors [BR:
sund03012
]
121914278 (GSPT1)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
121914278 (GSPT1)
Translation factors [BR:
sund03012
]
Eukaryotic type
Release factors
121914278 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
121914278
NCBI-ProteinID:
XP_042293498
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All DBs
Position
8:complement(34774470..34807707)
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AA seq
654 aa
AA seq
DB search
MEANGSGSSSDSAPDCWDQAEVEPGAGDNNDDASASASGAPSAEEEAASAASAGAPMASP
LELDEEQLLGAAFSRHLNVNAKPFVPNVHAAEFVPAFLRGPGPGPPPAQQPPPPPPSTTP
SAATTTPTPPAHEASAESLQEEQPSSCEGSNVAVSMDVSEPVVENGETEMSPEESWDHKE
EAIETELASGPSGDAGAIDEGIPEMMEEEEEIPKPKSLVAPPGAPKKEHVNVVFIGHVDA
GKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRA
YFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAM
LAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLT
GANLKEQSDFCPWYTGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGS
ICKGQQLVMMPNKHNVEVLGILSDDVETDAVAPGENLKIRLKGIEEEEILPGFILCDINN
LCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPR
FVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaacggcagcgggagcagcagcgactcggctcccgactgttgggaccaagcg
gaggtcgagcccggcgccggagacaacaacgacgacgcctccgcttccgcctccggggct
ccctccgccgaggaggaggcggcgtcggcggcgtcggcgggtgctccgatggcgtccccg
ctggagctggacgaggagcagctgctgggcgcggcgttcagccggcacctcaacgtcaac
gccaagcccttcgtgcccaatgtccacgccgccgagttcgtgccggccttcctcagggga
cccggccccggacccccgcccgcgcagcagccgccgccgccgccgccctccacgacgcct
tcggccgccacgacgacgccgacgcccccggctcacgaggcatcagcagaatctttacaa
gaggagcagccatcatcttgcgaaggttcaaatgttgcagttagtatggatgtctcagag
ccagttgtagaaaatggcgaaacagaaatgtcccctgaagaatcatgggaccacaaagaa
gaagccattgaaactgaattagcaagcggaccttctggcgatgcaggggctattgacgag
ggtattccagaaatgatggaagaagaggaggagataccaaaacctaaatcattggtagca
ccacctggtgctcccaaaaaggaacatgtaaatgtagtgttcattggacatgtagatgct
ggtaaatcaacaattggaggacaaataatgtacttgacaggcatggttgataaaagaacg
cttgaaaaatatgaaagagaagctaaagaaaaaaacagagaaacatggtatctttcatgg
gccttagacacaaatcaggaagaacgggacaaaggtaaaacagtggaagtgggccgtgcc
tattttgaaacagagaagaaacacttcactattttagatgctccaggccataagagtttt
gtcccaaatatgattggtggagcttctcaagctgatctagctgtgttggttatatctgca
agaaaaggagaatttgaaactggctttgagaaaggggggcaaacaagagagcatgccatg
ttagcaaaaacagcaggagtaaaacatttaatagttctaattaataaaatggatgatccg
actgtgaactggagcaatgaaaggtatgaagagtgtaaagagaaacttgtgccattcttg
aagaaagttggcttcaatcccaaaaaagatattcacttcatgccctgctcaggactaact
ggagcaaacctcaaggagcaatcagacttctgtccttggtatactgggcttccatttatt
ccatatctggataacctgccaaacttcaacagatcagttgatggaccaataaggctgcca
attgtcgataaatataaggatatgggcacggtggttctgggaaagctggaatcaggctct
atttgcaaaggacagcaacttgtgatgatgccaaataagcacaatgttgaagtccttgga
atcctttctgatgatgtagaaactgatgctgtagctccaggtgaaaacctgaagatccga
ctgaagggaattgaagaagaggagatcctaccaggatttatactctgtgatattaataac
ctgtgtcattcagggcgcacttttgatgctcagatagtgataattgaacacaaatccatc
atctgtcctggttataatgcggtgctgcacattcatacatgtattgaagaagttgagatc
acagccttaatctgtttggtagacaaaaaatcaggagagaaaagcaaaacccggcctcgt
tttgtcaaacaagatcaagtatgcattgcccgtttaagaacggcaggaactatctgcctt
gaaacatttaaagatttccctcagatgggtcgcttcaccttaagagatgagggtaagacc
attgcaattggaaaagttctgaaattggttccagagaaggactaa
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