Sceloporus undulatus (fence lizard): 121914318
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Entry
121914318 CDS
T07740
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sund01001
]
121914318 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sund04054
]
121914318 (CIITA)
Enzymes [BR:
sund01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121914318 (CIITA)
Protein kinases [BR:
sund01001
]
Serine/threonine kinases: Other
TAF1 family
121914318 (CIITA)
Pattern recognition receptors [BR:
sund04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
121914318 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_9
LRR_At5g56370
AAA_16
AAA_22
NB-ARC
NPHP3_N
Sigma54_activat
WHD_NOD2
nSTAND3
AAA_25
Motif
Other DBs
NCBI-GeneID:
121914318
NCBI-ProteinID:
XP_042293590
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All DBs
Position
8:complement(24008126..24029987)
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AA seq
1154 aa
AA seq
DB search
MNLFQEIFPRLHEILSKAPDTQLEALLNLILGEGTVSKEYFQTLLRERDREDLARKVALI
LVEKWALGLNPASSPTCLLEILGRCPEDATREASPRSRRRSGAEMDLGPLLGKSYLELLQ
SELDDWVLSQEVEEVAEFHTGPSIDTLNDADVLSMAEGEEEAYDKIAALAEYLLKDHQEK
PVEEVFGSLVSEEDFAESPRESCLEGKKRRSCSEALEPKRRKVAHSPAVCVLNDPSANVP
LNGCCPVADQPNFHLQFSVTTVGLAGRTPKILEPSASPHLEYYLLNPKDIQVILTFEPLV
QQTHWLARPEDTTKEGCPGKEGKTETGPDKSPPVPSEQIQKRPESVDAFCTELKSHFRDS
CHFGKMEGEAPLDHLYLECNLAEFPSEDKGRRSTDPEEKSRTPVERRHLFQTPGRNDPST
KTIVLLGEAGMGKSLLAQKICLEWSEGQWPKYDFVFRFDCGHLNTGSHQNLKSLLFEHSA
LSQEELNEVYKYVLHNPEKVLLIFDGFEELKDHDSFTKPCPERSPRWDPCGTGATLASLF
QKKLLNGCTLLLMARPKGKLHQCLPKADKILELTGFSMQQAKMYIAQYFEGLPTCDGAAT
LIQKSPYLFSHCHRPDLCRFICESVFQTEGIELPSTLTSLFVKSLLQKMAHATENKVHPK
RHLATLGQMAWDVLQNHQKVFTSSHFSSGEVKEFALDYGLVVPLLFPENSSNETEECGRF
AFPNSVVQNFLLALHLVLAKEIKDKKLTQHLCLLSKAKKSLSSSSSLDLVPRFLSGLLFL
EDNLLSPLLFGEEGEQDVEKMVAKKKKSLSKYIRRLPIRDFSPGRLLQLFHCVHETEDTY
LLQHLALELRSNLSFMGFSLAPSDIHVLSSVLKRSAKETTLDFRGSSIDSEGLRQLVVMK
NVSAFRASLSHAIDLWKHLWETKQEEQLRSAMEKFITLPFKAQAMKDVEDLSALVHLEEE
MAQSQADSNGCKIHRIPAVADFKQIEFMMGPISGLKGFQKLVQILDAFPCLQHLDLDSPK
ENEIGDEGVLSLCKVLPRLHSLETLNLSRNKITDLGAERLSAALPSLPSLKTLSLYNNRI
GDAGAEHLAEMLPKMPSLRVLDIHCNQITAAGAHCLTDSLKCCPWVQSMALWSPAIPHGV
LDHLQQLDPRIRLL
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttttccaggagattttccccagactccacgaaatcctctccaaagcaccagat
actcagctggaagcattgctgaacctcattttgggagaaggcaccgtctccaaggaatac
ttccagactttgctgcgcgaaagagacagggaagatctggcaaggaaggtggccttgatc
ctggtggaaaaatgggccctgggtttgaatcctgcctcctccccaacctgccttttggag
attttgggccgctgcccagaagacgcaacgagagaagcgtcgcctcggagcagacgccgg
agtggagccgaaatggacctgggtcctttgctggggaagagctacctggagctgctgcaa
agcgaactggacgactgggtcctttctcaggaggtggaagaagtggccgagtttcataca
ggtccttctattgatacgctgaatgacgcagatgtcctttccatggcagaaggtgaagaa
gaggcttacgataagattgctgcattggccgaatacttactcaaagaccatcaagagaaa
ccagtggaagaggttttcggaagcctggtttcagaagaagactttgccgaaagccccaga
gagagctgcctcgaaggaaagaagaggcgcagctgctctgaggccctggaacccaagcgc
cggaaagtggcgcactccccggctgtttgtgtcctcaatgacccctccgccaacgtccct
ctgaacggatgctgccccgttgctgaccagcccaatttccacctccagttttcggtgacc
accgttggcctggcagggaggaccccaaagattttggagccttcagcaagtcctcacctg
gagtattaccttctcaacccaaaggatatccaggtgattttgacctttgaacctctcgtc
cagcaaacgcattggctggccagacctgaggataccaccaaagagggctgtccaggcaaa
gaaggcaagactgagacaggacctgataagagccccccagtcccttctgagcaaattcag
aaaaggccagagtcagtggatgctttctgcacagagctgaagagccatttccgggacagt
tgccattttgggaagatggagggagaagcccccttggaccacctttacctggagtgcaac
ctggcagagtttccctcggaggacaaaggcaggaggagcactgacccagaggagaagtca
aggaccccggtggagagaaggcacctcttccagacccccgggaggaatgaccccagcacc
aaaaccattgtcctcctgggggaggctgggatggggaaatccctcttggcccaaaagatt
tgcctggagtggtccgagggccagtggcccaaatatgactttgtcttccgattcgattgt
gggcatctgaatactgggagccaccaaaacctcaagagcctcctctttgagcattctgca
ttgtctcaagaggaactcaacgaagtctataagtatgtcctccacaacccagaaaaagtc
ctcctcattttcgacggtttcgaagagctgaaggaccatgacagcttcaccaagccctgt
ccggagcgctcgccccggtgggatccttgtggcaccggagccactttggccagtctcttc
cagaagaagttactcaacggttgcacactgctactcatggcccgacccaaaggcaagctg
caccaatgtctacctaaagcggacaagatcctggagctgacaggattctccatgcagcaa
gccaaaatgtacattgcccaatattttgaaggcctcccaacttgcgatggggcagcgact
ctgatccagaagtccccttacctgttcagccattgtcaccgtcctgatttgtgtcggttc
atttgcgagtcggtcttccaaacggaaggcatagaattgccttccacacttactagcctt
tttgtgaagtccttgcttcaaaaaatggcccacgcaactgagaacaaagtccatccaaag
cgtcaccttgccaccttaggccagatggcttgggatgtcttgcaaaaccaccaaaaagtc
ttcacaagctcccatttctcttctggggaagtgaaagagtttgctttggactatgggtta
gtggttcctttactgttcccagaaaactccagcaacgaaacggaggaatgtggcaggttt
gcgtttcccaattccgttgtccaaaatttcttgctggccttgcatttggtcctggccaaa
gagatcaaggacaaaaaactgacccaacacctttgcttgctctccaaggcgaagaagtct
ctctcttcctcctcctctttggacttggtgcctcgtttcttatctggcttactcttctta
gaggacaatctcctctctcctctactttttggagaagaaggggagcaggacgtggagaag
atggttgccaagaagaagaaaagcctctccaaatacatccggagactcccaatcagggat
ttcagcccaggaagacttctgcaactgttccattgtgtccatgaaacagaagacacgtat
ctcttgcagcatttggcgcttgagctcaggtccaacctctctttcatgggcttctctctc
gccccgtctgacatccatgtcctaagctctgtcctaaaaagatctgcaaaggagacaacg
ttagacttcagagggagctccattgattcggaagggctcaggcagctggtggtcatgaag
aatgtgtcagccttcagggcctccctcagccacgccattgacctctggaagcacctttgg
gaaaccaagcaagaagaacagctacgatcggccatggagaaatttatcacccttccgttc
aaagcccaggcgatgaaggacgttgaggacctctccgctctggtgcatttggaggaagaa
atggcccaaagccaggcggactccaacggttgcaaaatacaccgcattcccgctgttgca
gacttcaaacaaatagaattcatgatggggcctatctctggtttgaagggtttccaaaag
ctggtccagattctggatgcctttccatgtctgcaacatttggacttggattctccaaag
gaaaacgaaatcggggacgaaggagtgttgagtttgtgcaaagtccttcctcggttgcac
tccttggaaacgttaaacttatcccggaacaagatcacagaccttggggcagaaaggctc
tccgccgctcttccatcattgccttccttgaagacgctcagcttgtacaataaccgcatc
ggagacgcaggagcagaacaccttgcagaaatgctccccaaaatgccctccttgagagtg
ttggacatccactgcaaccagataaccgcagcaggagcgcactgtctgaccgacagcttg
aagtgctgcccctgggttcaaagcatggcactatggagtccggccattccccacggagtc
ctggaccacttgcagcagctggaccctcgcatcaggcttctctag
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