Sceloporus undulatus (fence lizard): 121914324
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Entry
121914324 CDS
T07740
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03440
Homologous recombination
sund03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121914324 (TOP3A)
03460 Fanconi anemia pathway
121914324 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sund03032
]
121914324 (TOP3A)
03400 DNA repair and recombination proteins [BR:
sund03400
]
121914324 (TOP3A)
Enzymes [BR:
sund01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
121914324 (TOP3A)
DNA replication proteins [BR:
sund03032
]
Eukaryotic type
DNA Topoisomerases
121914324 (TOP3A)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
121914324 (TOP3A)
FA (Fanconi anemia) pathway
121914324 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
121914324
NCBI-ProteinID:
XP_042293596
LinkDB
All DBs
Position
8:24701162..24713839
Genome browser
AA seq
1033 aa
AA seq
DB search
MIGLALLLPRRGSGLLSRTWNRRFSPSAAVEMAFRNVQKVLCVAEKNDAARGIADILSNS
RMRRREGFSKFNKIYECQYPLLGQNVTVVMTSVSGHLLAQEFKLPFRKWHSCNPLVLFDA
EIEKFCPENYLDIKRTLEREVQHCQALVIWTDCDREGENIGFEIIQVCKAVKPSLQVFRA
RFSEITPRAIRAACENLTQPDQNVSDAVEVRQELDLRIGAAFTRFQTLRLRKIFPDVLAE
QLISYGSCQFPTLGFVVERFKAIQAFVPETFYKIKVTHDHEEGTVDFSWKRNRLFNHIAC
LVLYQMCTEEQVATVVEVGSRPKSKWRPLPLDTVELEKLASRKLKINAKETMKIAEKLYT
QGYISYPRTETNIFPKDLNLPNLVQLQTPDPRWGAFAQRILDQGGPTPRNGNKSDQAHPP
IHPTKHASNLQGNDQRLYEFIVRHFLACCSQDAKGQETTVEIDIANERFVAHGLMILARN
YLDVYPYEKWSDKVIPFYEKGSRFQPTTMEMVDGETSPPQLLTEADLISLMEKHGIGTDA
THAEHIETIKSRMYVGLTPDERFLPGHLGMGLVEGKDETFWVNLGRLLLVVLKERNFFLH
SKGFLLLSPGYDSMGYEMSKPDLRAELEKDLKLICEGRKDKSVVLREQIQKYKQVFIEAV
QKAKKLDEALSQYFGEVTPIAQEEEIYPAMPDPVRKCPQCNSDMVLKTKKNGGFYLSCLG
YPTCKSAVWFPDSVLDVSKDDSICDVCKPHPVHRLKLKFKRGSLLPLMPLEFVGCIGGCD
ETLREILDLRYLQGPPRPLQPDSHLPNHSLNHTSGNNGQGLLAPSFPTPPTRPGQTLPAA
SAGVSEDNAVVCNCGEEAVLLTVRKENANQGRQFYKCKTGSCSFFLWADQQPENRTPSAA
RDPGPPKRWDRSLARSQSEGSTPGGGGGGAVCRCEQPSVTRTVLREGPNKGRQFHTCAKP
REQQCGFFQWADEDVAPAFPSSHSMNGGTRGSGTKTKRSDSDSSLKAPTTKKPRTCGICH
QAGHTRKTCPQNR
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgattggcctggccctgttgcttccccgccgtggatccggattgctctcccgcacctgg
aaccgtcgcttctctccatctgctgctgtggaaatggcgttccggaatgtccagaaggtc
ctctgcgtggcggaaaagaacgacgcggccagagggatcgcggacatcctttccaacagc
aggatgaggaggagagaagggttctccaagttcaacaaaatctatgaatgccaatatccc
ttgcttgggcagaacgtaactgtggtgatgacatctgtttctggacatttgctggctcaa
gagttcaagctgccgtttcggaaatggcacagctgcaacccacttgtcctctttgatgct
gaaatcgagaaattttgccctgaaaactacctggacatcaagcggacgctcgagcgagaa
gtgcaacactgccaggctctggtgatttggacagattgcgatcgtgaaggcgagaacata
ggctttgaaatcattcaggtttgcaaagcagtgaagccaagcctgcaggtgttccgcgcc
cgcttctccgaaatcaccccccgtgccataagagccgcctgcgagaatctcacccagcct
gatcagaacgtgagtgatgctgtggaggttaggcaagagttggatctcaggataggtgct
gccttcactcgctttcagaccttgaggctccggaagattttccccgatgttctagcggaa
cagctgatcagctatgggagctgtcagttcccaacgctggggtttgtggtggaaagattc
aaagccattcaggcctttgtgcctgagacattctacaaaattaaagtgacgcatgatcat
gaagagggcaccgtggacttcagctggaagaggaaccgtctctttaaccacatagcatgc
cttgtcctctaccagatgtgcacagaggaacaagtggccaccgttgtggaagttgggagc
agaccaaagagcaagtggagacccctgccgctggacaccgtggaacttgagaagctggct
tcccgtaaactgaaaataaatgccaaagaaaccatgaagattgctgaaaagctgtacact
caagggtacataagttatcctagaacagaaaccaacattttccccaaagacttaaacctc
cccaacttggtgcagcttcagaccccagacccccgatggggagcctttgcacaaaggatt
ctcgaccagggtgggccaaccccacgcaatggaaacaaatcggatcaggctcaccctccc
attcatcctacaaaacatgcgagtaacttgcaggggaatgaccagcggctgtatgaattc
attgtgcgccactttctggcctgctgctcccaagatgcaaaaggccaggaaacaacagtg
gaaattgacattgctaacgaacgctttgtggctcacggcttgatgatcctggctagaaat
tacttggatgtctatccttatgagaagtggagcgataaggtgatcccattttatgagaaa
ggatctcgcttccagcccaccacaatggagatggttgatggggagaccagccccccgcag
ctgctgacagaagctgacctcatttctctcatggagaagcacggcattgggactgatgcc
acccatgcagaacacattgagaccatcaagtcacgcatgtatgtgggcctcactccagac
gagaggttccttccagggcatctggggatggggctggtagaaggtaaggatgagaccttc
tgggtgaacttgggcaggttactcctggtggtgttgaaagaaaggaacttcttccttcac
agcaagggatttttgctcctatccccaggctatgactccatggggtatgagatgtccaag
cctgaccttcgagccgaacttgagaaagacttgaagctaatctgtgaagggaggaaggac
aagtcagttgtactgagagagcagatccagaagtacaaacaagtttttatagaggctgtg
cagaaggcaaagaagttggatgaggccctgtctcagtattttggagaagtgacaccgatt
gcacaggaggaagaaatttacccagctatgccagatcctgtgaggaaatgtccgcagtgc
aacagcgacatggtcttgaaaaccaagaagaatggagggttttacctcagctgcttgggc
tatccaacctgtaaatcggccgtctggtttcctgattcagtgctggatgtcagcaaggat
gactccatctgtgatgtgtgcaaaccccatccagttcacaggttgaagctgaagttcaag
cggggcagccttctgcccctgatgcccctggagtttgttggctgcattggaggctgtgat
gaaacactgcgggagatcctggacctgaggtatctgcaaggaccaccccgacccttgcag
ccagacagccacctaccaaaccattccctgaaccacacatctgggaacaatggccagggt
ctccttgcaccttccttcccaacgcctcccacaaggccaggccagactcttcccgctgca
tctgctggtgtcagcgaggacaatgcggtggtgtgcaactgtggagaagaagccgtgctt
ctcactgtccggaaagagaatgccaaccaaggccggcagttttataaatgcaagacaggg
agttgctccttcttcctttgggccgaccagcagccagagaataggactcccagtgcagcc
agggatcctggccctcccaagcgatgggacaggagcttagcccgttcccagagtgaaggc
tccactccaggtggaggcggcggaggggctgtttgcaggtgcgaacagccctctgtcacc
cggacggttctacgagaggggcccaataaaggacgccagttccacacctgtgccaagccc
agagagcagcaatgcggcttcttccagtgggcggatgaagacgtggcaccagcctttcct
tcaagtcattccatgaacggaggcacgagggggtcaggaaccaaaacaaaaagatcagac
agcgattcatctctgaaggcaccgactaccaagaagccacggacttgtgggatttgccac
caagccggccataccaggaagacgtgtcctcagaatcgatga
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