Sceloporus undulatus (fence lizard): 121914430
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Entry
121914430 CDS
T07740
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sund03000
]
121914430 (RAI1)
Transcription factors [BR:
sund03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
121914430 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
121914430
NCBI-ProteinID:
XP_042293761
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All DBs
Position
8:complement(24934845..25015581)
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AA seq
1987 aa
AA seq
DB search
MQSFRERCGFHGNQPNYQPTSAQDSSRLENYRHQSQAGPHCERQRLVAKEYYSQPQPPQP
PPPPLPYPGYGENSAVDKYHRGSKPLRGQAIPSRPPSFPSYAIQENSPYPARYSGEESLQ
GWGSPQPQQPPQPLPGGVAKYEENLMKKTAAPSGSRQYHEPGPQLPFRTHSLHLQQPPPP
PPSTLSYPKLPRQKIQNEVSSPMPFPQGAHFTQHSQSFPASSTYTSVQSGSQAAHSYKSC
NAPSAPPPPPPPHERSLGNAANLSSGQRVQSLHGYQPNRISYDQQQQQQQQQQQQQQQQQ
QQQSMQGRHHAQEALHYQNLAKYQHYNQPGQSYCQADAPVRTPDQYYQTFSPGSSHSPAR
SVGRSPSYSSTPSPLMPNLENFQYSQQSLSTGAFPASLADHSSFMPLLNPSPTDGASPDT
QPPGNCKNLPKEKMAENLLSDLSLQSLTALTSQVENISNTVQQLLLSKSTGMPQKKGIKN
SPRTPEQLKGQHCSPESNNYSTEQAGTPHSDPLSTPQSVHAETQDADYMSGSEEQLERGF
LYCNQSRSPARVNSNSKAKPESVSTCSVTSPDNASTKSDDSFQSIHTSLPLETFTKFVAN
ERDCPRLLLSALSQEELASEIIGLQDAINEKADKGWANSPAPNKDPDKSPFHLENHRTCL
DSVVKSPWSNPGDSNTLAEPLKLDKALGGNNGKNFTEEVYDNPQVVFTTAETKNSLKTTS
SVGYNSKPNISVATSSSEATSFSCYSNATANSVGSESAMENFDWPDENLSDTWKELGSSL
QGSDLSKTLFSSKLSETSEEKKNACCLSLCDTEEPAGSEHMEGFTQQQQQQQQQQENKGE
NLAYDETTRADSERWLEDTTRQSCSGGDFSELPMMSSPDLKESDLEPEEYSSLCELAGSE
QKSVTYDAFTPKPAENAPALSLQDTPGSAEETTNAVAKESTAPSSHLSDQSVILLGPTVG
TETKVKSWFESSLHHLKPEEETLGVENALPDKAEASVTLVGKKPISLEKNPIISEPTSRG
KSLRSKKVSCRLSGGEEPIQPMSSPCTGIQAADMVANMCPGPNNLIEMPSKNPHGQTPRF
PAEGLPARMCTRSFTALTEPRVPDPLEGAKTSAPQEKLGKKSACVLKQRATFKARKPNGK
PSNPSPMLVPNFVPNEDPAGPKIKEANPSEAEMKDQQSMILRSRTRTQEVFNAKRKREKG
TMDTQLKPPKKVFPNHHLLGSFKMSPQSRSERESKLGKKVKLPKARPEMVDKVSERPLHA
LKRKSAFIPPVPAKKRNLVLRSNSNGSSTVKEEKPEVMPVLFKRMPSAKKAKTKPSPKNL
CEAILRSPQAKENPGVCLKISSRAAFQGAMKTKVLPPRKGRGLKLEAIVQKITSPNLKKF
ACKTAVAATAATAISSPVPTNSSNSSSSSSSSSHSNPLSPSLPEREPASKNASITPAAGE
ARPLNQAVSQKAPAAPAAEQLCRNPNNRSFRGKLMNSKKLSSNCFKGEAYSSPETLQHGG
GSMAASGVGLLPKKRNRKGKVAVFRVAKNSSLEKCPHLSPALLLPSREKSGVAAAAAAGG
GGGGGKVEEEQREGKKPKAEDKAFGNSEASDGRPSQAQTRGQKQRANHSNYNGYTKRQRK
HLNRRKAQNVPSRCKNRAKRRHRQQAPLLSPAEPEIRLKYVSCKRLRPDSRAPPFSPYVR
VEKQGDFVTTCTVVNCPADEARLHNDQHAVSSSSLSAQAGFLGAASLQARAILPLSSTMH
LGPVVSKTLNATCLVCCLCRNPANYKDQGDLCGPYYPEDCLPKKKSRLKDKIKVEGLSEE
PPSPPLLKGTDNNCATSTLGGKPPRLDSGADSAKQSTLRSSSRGMFRKLQSCYCCDERTE
GEEAAAATAAAAAAAAAEKPKRHECGKAELSPLDPAGDTQEHWVHEACAIWTAGVYLVAG
KLYGLQEAIKMAADLRCSSCQQIGATIGCCHKGCAQTFHYTCAIDTGCWLTEETFSLNCP
RHKKQPL
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttccgcgaaaggtgtggtttccatggcaaccagccgaactaccagccgact
tcggcgcaagattcatcacgcctggagaattacaggcatcaaagccaggctgggccgcac
tgcgaacgccagaggctggtagccaaggagtactatagtcagccccagccaccgcagcca
ccgccgccgccgttgccgtacccaggctacggggaaaacagcgccgtggacaaataccac
cgtgggagtaagcccttgcggggccaggcgatccctagtcggcctccgtccttcccaagc
tacgccatccaggagaacagcccctacccggcccgctattccggcgaggagagcttgcaa
ggctggggttcgcctcagccgcagcaacctccgcaacctttgcccggaggagtggccaaa
tacgaggaaaacttaatgaaaaagacggccgctccttcgggaagcaggcaataccacgag
ccgggccctcagctccccttccggactcactccttgcacctccagcagccgcctccgccg
ccaccgtcgactttgagctatcccaagctcccgaggcagaaaatccagaatgaggtatct
tctccgatgccatttccacaaggggctcactttactcaacattcgcagtccttcccggcc
tcctccacatacacctctgtccaaagcgggagccaagcggctcattcctacaaaagttgc
aatgctccctcggccccaccaccgccgccgccgcctcacgaacggagtctcgggaatgcc
gctaatctgtcctctgggcaacgggtccagagcttacatggctaccagcctaaccgaatc
agttacgaccaacaacagcagcagcagcaacagcagcagcagcagcaacaacaacaacaa
cagcagcaatccatgcaaggcagacaccatgctcaggaggcccttcattatcaaaacctt
gcaaaataccaacattataatcagccaggacagagctactgccaagcggatgcacctgtg
aggacaccagaccagtattaccaaacttttagccccggttccagtcattctccggcccgt
tccgttggtagatctccatcctacagttcgactccttcccctttgatgcctaacttggag
aactttcaatacagccagcagtctttgagtacaggagcgttcccagccagcctcgccgat
cacagctctttcatgcctttgttgaacccttcgccaaccgacggggcgagtccagacact
cagccccccgggaactgcaagaacttgccgaaggaaaaaatggctgagaacctcttgtcg
gacctgagtcttcagagcttgacggcgctcacctcgcaagtcgaaaacatttccaacacc
gtccagcagctgcttctttccaaatccacagggatgccccagaagaaagggatcaaaaat
tcacccaggacacccgaacagctcaagggtcagcattgcagccccgaaagtaataattat
tccactgagcaagcagggactccacactcagaccctcttagcacgccgcagtcagtccat
gctgaaacccaggatgctgattatatgagtggatctgaggagcaactcgaaagagggttc
ctctactgcaatcagagccgcagcccggcccgtgtcaacagcaactccaaggcaaagccc
gagtccgtctctacttgctccgtgacttcgccagacaatgcatcaacaaagtctgacgat
tccttccagagcatccacaccagtcttccgctggagaccttcaccaagtttgtggccaac
gagagagattgccccagattgctcctcagtgccctttctcaagaggagcttgcctctgaa
attattggcttgcaagacgccatcaatgagaaagcagacaaaggctgggccaattcccca
gctccaaacaaagaccccgacaaatcccccttccacttggagaatcacagaacctgcctg
gattctgtggtcaaaagcccgtggtccaatccgggggactccaatacccttgccgaaccc
ttgaagttagacaaagccttgggagggaacaatgggaagaattttaccgaagaggtatat
gataacccccaggtggtatttacaacagcggagacaaagaactccctaaaaaccaccagc
tcggtaggctacaactccaaacccaacatctcagtggccacctccagctcagaggccacg
agtttcagctgctattcgaatgccacagccaattcggtaggatctgaaagtgccatggag
aacttcgactggccagatgaaaacctcagcgacacgtggaaagaacttgggtcgagtctc
caagggtcagatctttccaaaactctgttctctagcaaactgagtgagacttccgaggag
aaaaaaaatgcctgctgcttgagtctttgtgatacagaggaaccggctggatctgagcac
atggaaggtttcactcagcagcagcagcaacaacaacagcaacaggagaacaagggagaa
aacttagcatacgatgagaccaccagggcagacagtgaacgatggctagaagacaccact
aggcagtcttgttctggaggagacttcagcgaactcccaatgatgtcctctccagacctt
aaagaatctgatttggaaccagaagaatattcctctttgtgtgaacttgccggttctgag
caaaagtctgtgacctatgatgctttcacacctaagccagcagagaatgctcctgccctt
tccctccaagacacaccaggctcagcagaggagacaaccaatgctgttgcaaaagagagt
accgctccttcttcgcatctctccgaccaatccgttatcctcttaggcccaacagtgggc
acagagacaaaagtgaaaagttggtttgaatcttctctccatcacttgaagcccgaggag
gagaccttgggggttgaaaatgccctccctgataaggcagaagcatcagtgaccttggtg
gggaagaaaccgatctcgctggaaaaaaacccaataatatccgaaccaacatccaggggt
aagagccttcgcagtaagaaggtctcctgcaggctgtcgggaggagaagaacccatccaa
cccatgtccagcccttgtacaggcatccaggcagctgacatggtggccaacatgtgccct
ggcccaaacaatctgatcgaaatgccaagtaagaatcctcatggccaaactccccggttt
ccagcggaaggcttaccggctaggatgtgtacccgctcctttactgcactgaccgaaccc
agggtgccggatcctctagaaggtgcaaagacctcggctcctcaagagaaactgggcaag
aagtcagcttgtgtcctgaaacagagagccacgttcaaagctaggaagccgaatggtaag
cccagcaacccgtctcccatgctggtcccaaattttgtgccgaatgaagaccctgctgga
cctaaaatcaaagaagccaacccttcagaagcagaaatgaaggatcaacagtccatgatc
cttcggtccagaactcggactcaggaggtctttaatgcaaagcggaagagagagaagggc
actatggatacccagctcaaaccacccaagaaagtttttccaaaccaccacctgctgggt
tccttcaagatgagtccccaaagcaggtctgaaagggagagcaagctgggcaaaaaggta
aagcttcctaaagccagacctgaaatggtggacaaggtttccgagagaccactccatgcc
ctgaagaggaagtctgccttcatccctccggttcctgctaaaaaaaggaacctggtttta
aggagcaacagcaatggcagcagcaccgtgaaggaggagaagccagaagtcatgcctgtc
ctgttcaaaaggatgccgtcggccaaaaaggccaaaacgaagccctctcccaagaacctc
tgtgaagccatcctcaggtctcctcaggccaaggaaaaccccggagtttgcctcaagatc
agttctcgggctgccttccagggagccatgaagacgaaagtgcttcctccgaggaaaggc
cgaggcttgaagctggaagccatcgttcagaagatcacctcccctaatctgaagaagttt
gcttgcaaaacggctgtggctgccaccgccgccaccgccatctcttctcctgtccccacc
aacagcagcaatagcagcagcagcagcagcagcagctcccacagtaatcctctcagccct
tccctaccagagagggagccggcctcaaagaatgcaagcataaccccagcggcgggggaa
gccaggccattaaaccaggccgtgtcacaaaaggctcccgctgctccagccgctgagcaa
ttatgcagaaacccgaacaacagatccttcagaggaaaactaatgaacagtaagaaactg
tcctccaactgtttcaagggtgaggcctattcatctcctgagacgctgcagcacggcggc
ggcagcatggctgcaagcggcgtcggcctgctgcccaagaaaaggaaccgaaaagggaaa
gtggctgtcttccgagttgctaaaaatagtagcttggagaaatgccctcacctgagcccg
gctttgcttctcccatccagggagaagtcaggggtggcagcggctgcggcagcaggagga
ggaggaggaggagggaaagtggaagaggaacaaagggaggggaaaaagccaaaggctgaa
gacaaagcctttggcaacagcgaggcctctgatggaagaccctcgcaggcccaaaccagg
ggccagaagcagcgagccaaccactccaactacaacggctacaccaagaggcaaaggaag
cacctcaaccgccggaaggctcaaaacgtgccgtcgaggtgtaagaaccgggccaaaagg
cggcaccggcagcaggcccctctgctcagccccgccgagcccgaaattcggctcaagtac
gtgtcctgcaagcggctgcggccggacagccgggcgccacccttctccccgtacgtccgg
gtggagaagcagggcgatttcgtcaccacttgcaccgtggtcaactgccccgctgatgag
gccagactccacaacgaccagcatgcggtgtcttcttcttctttgtcggcccaggctggg
tttctgggggctgcctccctgcaagcccgagccatccttcctctgtcgtccacaatgcac
ctcggcccggtggtctccaagaccctcaacgccacctgcttggtctgctgcctgtgccgg
aacccggccaactacaaagaccagggggacctctgcgggccatattacccggaggactgc
ctgccgaaaaagaagtcgcggctgaaagacaagatcaaagtggaggggctgagcgaagag
cctccctcccctcccctcctcaaagggacagataataattgcgcaaccagtacgttgggt
ggaaagccgccaaggttggacagtggggctgactcagcgaaacagagcacgctgcgctcc
agttcgagggggatgtttaggaaactacaaagctgttactgctgcgatgagaggacagag
ggagaggaagcagcagccgcaacagcagcagcagcagccgcagccgccgccgaaaaaccc
aagaggcacgaatgcggcaaagctgagttgtcgccgctggatcctgctggagatacgcag
gagcactgggttcacgaggcctgcgcaatatggacagctggggtttacctggtggcaggg
aagctctatggactgcaggaggcaataaagatggccgctgatttgagatgctccagttgt
cagcaaataggagccaccatcggctgttgtcacaaagggtgcgcccaaacctttcactac
acatgtgccattgatacaggttgttggttaaccgaagagaccttctcgctcaactgcccc
agacataagaaacagcccttataa
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