Sceloporus undulatus (fence lizard): 121914827
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Entry
121914827 CDS
T07740
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04010
MAPK signaling pathway
sund04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121914827 (CACNA1H)
04020 Calcium signaling pathway
121914827 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sund04040
]
121914827 (CACNA1H)
Ion channels [BR:
sund04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121914827 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
121914827
NCBI-ProteinID:
XP_042294490
LinkDB
All DBs
Position
8:24421659..24559243
Genome browser
AA seq
2497 aa
AA seq
DB search
MTDGERREHFQPLASDEVRVPIASIGSAPGQVPQSREEKDEDALSACKSIQDSLGSVGSS
ARDPAQDGENQVPYPALASTVFFCLDQTTRPRSWCLRLVCNPWFEHVSMLVILLNCVTLG
MFQPCQDTKCKSERCTILEAFDHFIFAFFAVEMVIKMVALGIFGQKCYLGDTWNRLDFFI
VIAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCF
FVFFIFGIVGVQLWAGLLRNRCFLDTNFQMTYNLTFLHPYYRPEEGEENPFICSSHRDNG
MQKCSSIPIRKEYKVECTLSMDSYNPNSYPLDFSSRNGCINWNQYYNVCRTGDYNPHNGA
INFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVI
ATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTLRL
YNHWQNKRRKKVDPTSAAHNGQGHRSKKRITSIHHLIHHHHHHHHHHYHLSNGSPQGPRS
NPEICDLKLSVVKPRSQLTLPPPSPNLRSSMAPDSESVRSIYHTDCHVEGAGVKCKSSNI
PAAIKFPNNTNMNYPTILPSPVVGKGSVTPASKGMKMGGSSGCVTPVAMVNSPAHMNVDS
YEKLHHLVGEHGLCRTSSRLSGLNVPCPLPSPQSSMLNCELQNCPYCASILEDPEFEFSE
SDSYESGDDNTGVYEFTQDVKHGDQRDQIQQQRNKKRKKEDKKPPKERNKIVRFWKAFGE
KLKRIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMVLKL
LAFGIWGYIKNPYNIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQ
LVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFGLKTDTGDTMPDRKNFDTLLWAI
VTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDA
NRSDTDEDKTSINFEEEMEKLKELRASEMKMYSLAVTPNGHLEGKGSMPPPIIMRTAATP
MPTPKGSPHMDSMVYPFLDSRRGSNASVDPMSFDQKSLSSLRSTPCAPWGTSSNWGSRRS
SWNSLGRAPSLKKKSQCGERESLLSGEGKGSTDDEAEDTKLSAAGRLPLHRRAESLDCRG
ALELPELLQVSGVHHPMSLSPMAVLPTEYQDCNGKMLHVPNEFYLHMDGHKDDLLDLEDE
LEDSYCYRIRKAFEPYKPEWCKTHEDWSLYLFSPQNRFRANCQKVIAHKMFDHVVLVFIF
LNCITIALERPDIDPNSTERVFLSVSNYIFTAIFVAEMMVKVVALGFFSGEHTYLQSSWN
ILDGVLVFVSIIDIIVSMASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLIS
SLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCEGPDIRNVSTKADCKNAHYKWVRRKY
NFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGVDQQPSQNHNPWMLLYFISFLLIVSFF
VLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRSKAIYMSEAQRRPYYADYS
PVRRHIHTLCTSHYLDLFITFIIGVNVITMSMEHFNQPKSLDEALKYCNYVFTIVFVIEA
VLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIEMNAALPINPTIIRIMRVLRIAR
VLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEDNPCEG
LSRHATFNNFGMAFLTLFRVSTGDNWNGIMKDTLRECHRDDKHCLSYLPIISPVYFVTFV
LIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGISTPVRVPESNLATPRT
GLPLLVKHHALASLSCESVSLAIPDLDLLEGGAHPMAAFASFRASSHRHLLTASHNAPGG
EAEDIATSLGEPQNLLTVRKISVARMHSLPNDSYMFRPVMPAKAPYPLHEAELEAYSFKS
PRGSITSVRSQPVETCSSSLRVPREAFRPTTPPPHREGQGAPWKLRPPQAPPLSPSVNRL
LCRQEAIQRDSLESQGADSKDSTQTEACETLQPKKLLQSTLGSPLPQHPAPMPPLPGSPP
RPHTSLHRSASVRTRKHAFGQHSLPRRPSSGEGNPNGSFFESSDLADEEVSHINSSAGGW
QDGVDSRERSKSPFASPVPSPVILKNGSTTSLTAGGSKEKDLKKFYSVDTRGFLAKPTWT
DDHRRHSIEICPFVTDGDHGFPESSEEKKAFHVHPESEYIHGVRRKKKMSPPCISIEPPM
EEEKNTSTRTKASENSLLRRRTPSCESTAYRDSSELSESQPGDPGSKGERRGAPPPTCRG
EHLTIPNFSFEQSDTPNSTGSLSESGPVGSLPADSLPEDSAALELQKVDHLKPQCGPPPV
QNQEVLGGTRSPLRKHGPVPVITATTTTTDGEVDEPV
NT seq
7494 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgagagaagagaacactttcagccgctggcgagcgacgaagtacgggtc
cccatagcctccataggctctgcccctggacaagtgccccaatccagggaagagaaggac
gaggatgctctcagtgcatgtaaatccatccaggacagtcttggctcagtgggatcgtct
gcccgggatccagcccaagatggagagaaccaggtcccttaccctgcgctggcctccacc
gtcttcttctgccttgaccagacgacccgaccgcggagctggtgcctcagactggtctgt
aacccctggtttgagcatgttagcatgctggtgatcctcctgaactgcgtcactctgggg
atgttccagccttgtcaagacaccaagtgcaagtcggagaggtgcaccatcttggaggcg
tttgaccacttcatctttgccttctttgcggtggagatggtcatcaagatggttgctctg
gggatctttgggcagaaatgttacctcggagacacgtggaaccgtctggacttcttcatc
gtgattgccggcatgatggagtactctttggacggacacaacgtcagcttatccgccatc
cgtacggtccgggtcctaaggcctttgcgagccattaacagggtgccaagtatgcgcata
cttgtgaccctgctgctagatactctgcctatgttaggcaacgttcttctcttatgcttc
tttgtctttttcatctttgggatcgtcggggtgcagctctgggcaggcctgctgcggaac
aggtgtttcctggacaccaatttccaaatgacatacaacttgactttcctgcatccgtac
tatcgaccggaggaaggggaggagaacccattcatctgttcatcccaccgggacaacggc
atgcagaaatgctccagcatcccaatccggaaggagtacaaggtggaatgtactttgagc
atggactcttacaacccgaactcgtatcctctggacttcagcagccgcaacggctgcata
aactggaaccagtattacaacgtttgcaggacgggcgactataacccgcacaatggagct
attaattttgataatattggctatgcttggatagctatttttcaggttataaccctggaa
ggatgggttgacatcatgtactatgtcatggatgcgcactctttttacaattttatatat
tttatactacttataatagttggttctttcttcatgattaacctgtgcctggttgtgatc
gcaacacagttttccgaaacaaagcagcgggagaaccagctgatgcaagagcagcgggcc
cgctacctctccaacgacagcacaatcgccagcttctccgaaccggggagctgctatgag
gaactcctcaagtacatctgccacattttcaggaaagtcaagcggcggacgttgcggctc
tacaaccactggcagaacaagcggaggaaaaaggtggaccccaccagcgcggcccacaat
ggccaggggcaccggagcaagaagcgcatcacctccatccatcacctgatccaccaccat
caccaccaccaccaccaccattaccacctcagtaacggcagcccgcaagggccgcgctcc
aacccggagatctgcgacctcaaactcagcgtcgtgaaacccaggagccagctcaccctt
ccgccgccatcgcccaacctccggagctccatggcgcccgactcggagtcggtccgtagc
atttaccacacggactgccacgtggaaggggccggggtgaagtgcaagtcttccaacatc
ccggccgccattaagttccccaacaacaccaacatgaactacccgaccatcttgccttct
cctgttgttggcaaagggagtgtcaccccggcgtccaaagggatgaaaatgggaggaagc
agcggatgcgtcacgccggtggccatggtcaacagtccggcacacatgaacgtggattct
tacgaaaagctccaccatttagttggagaacatggtctctgccggacgtccagcaggttg
tccggactaaacgtcccgtgtccgctgcccagtccccaatccagcatgttgaactgtgag
ctccagaactgcccttactgcgccagcatcttggaggatcccgagttcgagttcagcgag
tcggacagctacgagtcgggggatgacaacaccggggtctatgagttcacgcaggatgtt
aagcatggggaccaaagggaccagatccagcagcagaggaacaagaagaggaagaaggag
gacaagaaaccgcccaaggagaggaataaaatcgtcaggttctggaaggcgtttggggag
aagctgaagcggattgtggagagcaagtatttcaaccgtgggattatgattgccatcctc
atcaataccctgagcatgggcatcgagtatcatgaacagccagacgagttgaccaatgcc
ctggagatcagcaacatcgtcttcacaagtatgttcgccctggagatggtcctcaagctg
ctggctttcggcatctggggctacatcaagaacccctacaacattttcgacggcatcatc
gttgtgatcagcgtctgggaaatcattggccagtcggacggcggcctctcggtcctgagg
acttttcgccttcttcgggtcctgaagctggtgaggttcatgccagccttgcggcgccag
ttggtggtcctcatgaagaccatggacaacgtggccaccttctgcatgctcctcatgctc
ttcatcttcatcttcagcattcttggcatgcatcttttcgggtgcaagttcggcttgaag
accgatacgggggacaccatgccggataggaagaacttcgacaccttgctttgggcgatt
gtcactgtctttcagatcctgacccaagaagactggaacgtggtcctctacaacggcatg
gcgtccacctcttcctgggccgccctctattttgtggccttgatgaccttcgggaattac
gtcctcttcaacctcctggttgccatcttagtggaaggtttccaagccgagggcgatgcc
aacagatctgacacggatgaagacaaaacgtccatcaactttgaggaagagatggagaag
ctgaaggaacttcgtgcttctgagatgaagatgtactctcttgcggtcactcccaacgga
cacctggagggcaaggggagcatgcccccgccgatcatcatgcgcacggccgccaccccc
atgcccaccccaaagggctccccacacatggactccatggtctacccgtttctggactcc
aggagaggaagcaacgcctcggttgatcccatgagctttgaccaaaaatccttgtccagc
ctccgcagcaccccttgtgccccctggggaaccagcagcaactggggcagccgtcgctcg
agctggaacagcctgggacgggccccgagtctgaagaagaagagccagtgcggggaacgg
gagtccttgctctccggggaaggcaaaggcagcaccgacgacgaagccgaggacaccaag
ctcagcgccgccgggcggctgccactccaccgccgggccgagtccctggattgccggggg
gccttggagctgccagaactgctccaggtgtctggggtccaccaccccatgagcctcagc
cctatggctgtgttgcccaccgagtaccaggactgcaacgggaaaatgcttcatgtgccc
aatgagttctatctgcacatggacggccacaaggatgaccttcttgacctggaggatgag
ctggaggacagttactgctacaggatccgcaaagcctttgagccctacaagccggagtgg
tgcaagactcatgaggactggtccctctatttgttttcaccccaaaatcggtttcgggcc
aactgccagaaggtcatcgcccacaagatgtttgaccacgtggtcctcgtcttcatcttc
ctcaactgcatcaccatcgccttggagaggccagatattgaccccaacagcacggaacgg
gtcttcttgagtgtctccaactacattttcactgccatctttgttgctgagatgatggtt
aaggtcgtagcccttggcttcttctcaggagaacacacctatctccaaagtagctggaac
atcctggacggagtcctggtctttgtgtccatcatcgacatcattgtctccatggcatcg
gcaggaggggcgaagatcttagggatcctccgggtacttcgactgctgcgcactttacgg
cctttacgcgtcatcagccgagcgccgggtctgaagctggtggtggagacactgatctcc
tctctccgccccatcggcaacattgtcctcatctgctgtgctttcttcatcatctttggc
atcttgggagtgcagctgtttaaaggcaagttctactactgcgagggtcccgacatccga
aacgtctccaccaaagctgactgcaaaaacgcccactacaaatgggtccggcgcaagtac
aacttcgacaacttggggcaggccctgatgtccttgtttgtcctctcctccaaagacggc
tgggtgaacatcatgtacgacggattggacgcagtaggggttgaccagcagcccagccag
aaccacaacccttggatgctcctctactttatctccttccttctcatcgtcagcttcttc
gtgctcaacatgttcgtcggcgtcgtggtggagaacttccacaagtgccgccagcaccaa
gaagcggaggaggcccggcgcagagaggagaagcgcctgcggcgactggagaaaaagcgt
aggagtaaggcgatatacatgtctgaagcccaacgccgcccgtactacgccgactactca
cccgtccggaggcacatccacacgctttgcaccagccactacctggacctcttcatcacc
ttcatcatcggggtgaacgtcatcaccatgtccatggagcacttcaaccagcccaagtcg
ctggacgaagccttaaagtactgcaactacgtcttcaccatcgtcttcgtcatcgaagcc
gtgctgaagctggtcgcgttcgggtttcggaggttcttcaaagacaggtggaaccagctg
gacctggccatcgtcctgctgtccatcatgggcatcaccttggaggagattgagatgaac
gccgccctccccatcaaccccaccatcatccgcatcatgcgggtgctccggattgcgaga
gtgctgaagctgctcaaaatggccacagggatgcgggctttgctggacaccgtggtccaa
gccctccctcaggtagggaaccttggcttgttgttcatgctcctctttttcatctacgct
gctctgggagtggagctgtttggaaagttagattgcagtgaggacaacccctgcgaaggt
ctcagccgccatgccaccttcaacaactttggcatggccttcctcacccttttcagagta
tcgaccggagacaactggaatggcatcatgaaggacacgctccgggaatgccaccgggac
gacaagcattgcctcagctacctgcccatcatctccccggtctacttcgtcacgttcgtc
ctcatcgcccagttcgtcctggtcaacgtggtggtggccgtcctgatgaaacacttggaa
gagagcaacaaagaggccaaggaagatgccgaaatggatgctgaaattgagctggagatg
tccagagggatcagcaccccagtcagagtccccgaaagcaacctggctacacccaggaca
ggattgccgctgctggtcaagcaccatgcgctggcatctctgagctgtgagagcgtctct
ctagccatccccgacttagacctgctggagggaggggcgcacccaatggcggcgtttgcc
tccttccgcgcttcttctcaccgccatctcttgacagcttcccacaatgccccgggagga
gaggctgaggacattgccaccagcctcggggaaccccagaacctgctcactgtccgcaag
atttcggtggccaggatgcactccttgcccaacgacagctacatgttccgccccgtgatg
ccagccaaagccccctacccacttcatgaagcagagctggaggcctattcattcaagtca
ccaagagggtccattacatctgtccgttcgcagccagtggagacctgctcctcgtcgctg
agggtgccacgggaagcctttcgtccaacaactccacctccgcaccgcgaaggccaagga
gccccctggaaacttcggcctccgcaggcgccacctctgtctcccagcgtcaacaggctc
ctgtgcagacaggaggcaatccagagggattccttggaaagtcagggagccgattcaaag
gacagcacacaaaccgaggcctgtgaaaccctccagccaaagaagctgttgcagagcacc
ttgggctcccctctgccccaacacccagcccctatgccacccctgcctgggagccctcct
cgtccccacacttccctccataggtccgccagcgtccgtacccgcaaacatgcctttggt
cagcacagtctccccagaaggccttccagtggcgaaggcaatcccaacggctccttcttc
gagtcctcagacctggccgacgaagaggtcagtcacatcaacagctcggcgggaggatgg
caggacggggtggacagcagggagcggtccaagtcccccttcgcctccccggttccatcc
cccgtcatcctcaagaacggcagcacgaccagcctgactgcaggcggatccaaagagaaa
gacttgaagaagttctacagtgtggacacccgagggttcttggccaaaccaacgtggacc
gatgaccaccggcggcactccatcgagatctgtccattcgtcactgatggggatcatggc
tttcctgagtcgtcggaggagaagaaagcgttccatgtccatcccgagtctgaatacatc
catggggtccgccgcaagaagaaaatgagccccccgtgcatttctatagagcctcccatg
gaggaagagaagaacacatccacgcgtaccaaagcctctgagaacagcctgttgcgcaga
aggaccccttcgtgcgaatccacagcatacagggactcctcagagctctcagagagccag
ccgggagacccgggctccaagggggaacgccggggggcaccaccgcccacctgtcgcgga
gagcatttaaccatccccaacttttcttttgagcagtccgatacccccaactccaccggc
agtctctcggagagcgggccggttgggagtctcccggcagattccctgcctgaggacagc
gcggcgctcgaattgcaaaaggtggaccacttgaaacctcagtgcggaccgccgcccgtg
caaaaccaagaggttctcggtgggactcggagccccctccggaagcatggaccggtcccc
gtaatcacagcgacgacaacgacgacagacggagaggtggacgaaccggtatag
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integrated database retrieval system
