Sceloporus undulatus (fence lizard): 121914890
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Entry
121914890 CDS
T07740
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03430
Mismatch repair
sund03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
121914890 (PMS2)
03460 Fanconi anemia pathway
121914890 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sund03400
]
121914890 (PMS2)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
121914890 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
121914890
NCBI-ProteinID:
XP_042294605
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Position
8:complement(30234971..30251992)
Genome browser
AA seq
869 aa
AA seq
DB search
MKRTKGERARSQSPAAAKMETPPRAQSAKAIKPIDHKSVHQICSGQVVLSLCTAVKELVE
NSIDAGATTIEVKLKDYGADLIEVSDNGCGVEEENFAGLTLKHHTSKIQDFSDLTHVETF
GFRGEALSSLCALSDVSIFTCHKSAKVGTRLVFDHNGTIALRVPYPRQQGTTVIVQQLFH
TLPVRHKEFQRNIKKEYAKMAQVLQAYCIVSTGVRITCTNQVGQGKKQTVLCTNGNPGIK
ENIGAIFGQKQVQSLIPFVQLPPSDAICEEYGLNLADMPTKLYTITGFVSRCDSGVGRST
TDRQFFFINQRPCDPAKVSKLVNEVYHMYNKHQHPCVVLNICVDSESVDINVTPDKRQIF
LQEEKLLLAILKTSMMGMFGSEVNKLVLSQKLMDVEGNFKSGVQNEAEAPVLETRDSFSQ
DLGGNAKIAMTVARLRESFALHRIKKATGPNAENPKQQCPSSKQQKLPMFFSVLDSPDQK
TASNQMAKDLSRRVLHRNATKSAEETYSGCRSSASADSDLGSRAPEMAICLSCESAASSP
EEESQVPEEGIQSESSLGTEWDSDQSQRSALSQQLHPSSPKVKGLKISSSLSQGSSSWEE
KEAQDSVALSQYDIPVEIAKRTVPLSFSLRILRERVKTLIGKQERKAERLKDRRFRAKIS
PGENKRAEDELRKEISKEMFAKMDIVGQFNLGFIIAKLNSDLFIIDQHASDEKYHFEQLQ
EHSVLQGQKLISPQDLNLTAVNESILIENLEIFRKNGFDFVIDEDAPVTQRVKLVSLPVS
KNWTFGPQDIEELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMVGTALNANEMKKVIAH
MGEIEHPWNCPHGRPTIRHIANLDLISQE
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaacaaagggagaaagagccagaagccagtctcctgctgcagccaagatggag
acccctcccagggcccagtctgctaaagccatcaagccaatagaccataagtcggtccac
cagatctgttcggggcaagtagtgctgagtctatgcaccgcagtgaaagagctggtcgaa
aacagcatagatgccggcgctactactatcgaagttaagcttaaagattatggagcagac
ctcattgaagtttctgataatggatgtggtgtagaagaagaaaactttgccggcttaact
cttaaacatcatacatctaagatacaggatttctctgatcttacgcatgttgaaacgttt
ggctttcgaggggaagctctgagttccttgtgtgctttaagcgacgtttccattttcacc
tgtcacaagtcagcaaaggttgggacgcggctggtgtttgatcacaatgggacaattgcc
ctgagagtcccttatccccggcaacaagggacaacagtcattgtgcagcagttgttccat
acgttgccagtgcggcacaaagaatttcagcgcaacattaaaaaggagtatgcaaaaatg
gctcaggtgttgcaagcatactgcatcgtttccacaggggtccggattacctgcaccaat
caggttggtcaagggaagaagcaaactgtgttatgcaccaatgggaaccctggcataaaa
gaaaacatcggagcaatattcggtcaaaaacaggtgcaaagcctgattccttttgtgcag
ctgcctcctagtgatgccatctgtgaggaatacggcttgaacctggctgatatgcccaca
aagctttatactatcacagggtttgtttcccgttgcgattctggcgttgggaggagtacc
accgacagacagttcttctttattaaccagcggccgtgtgacccagcaaaggtttctaaa
cttgtgaacgaagtgtatcacatgtacaacaaacaccagcatccatgtgttgttctgaac
atatgtgtggactcagagtctgttgacatcaatgtaacacccgacaaaaggcaaatattt
ctgcaagaagaaaagcttttactagcaattctaaaaacttcaatgatgggaatgtttgga
agtgaagttaacaaacttgtcctcagtcagaagctgatggatgttgaaggaaactttaaa
tctggggttcaaaatgaggcagaagcacctgtcttggaaacgcgtgattccttctctcag
gatctgggtggaaatgccaaaatagcaatgaccgtggccagacttcgggagtcatttgct
ctccaccgtattaaaaaagccactggtccgaatgctgaaaatcccaaacagcaatgccct
tcctccaaacagcaaaagcttcccatgttctttagcgttttggattccccggatcaaaag
actgcctccaaccaaatggccaaggatttaagcaggcgagtccttcacagaaatgccaca
aaatccgcagaagagacctattccggttgcagaagtagtgcctccgcagactcagatctg
ggttcaagagccccagagatggctatctgtctcagttgtgaaagcgcagctagttcccct
gaagaagaatcccaagttcctgaagaaggaatccagagtgaatcttctttgggaacagaa
tgggactcagaccaaagccaaaggagtgctttgtcccagcaattgcacccttcgtccccc
aaagtgaaaggcttgaagatcagctcctctctctcgcagggatccagttcgtgggaagaa
aaggaggcccaggactctgtggctctttctcaatatgacatcccagtggaaatagcaaag
aggactgtgcctctgagcttctctctgaggatcctgagagaaagagtgaagacgctgatc
gggaagcaagagaggaaggctgaaaggctgaaggacaggagattcagggcaaaaattagt
ccaggagaaaacaaaagggcagaggatgaattaaggaaagaaataagtaaagagatgttt
gctaaaatggatatcgttggccagtttaatttaggattcataatagccaagctgaactcg
gacctcttcataatcgatcaacatgcgtctgatgagaaataccattttgagcaattgcaa
gagcactcggttcttcagggacagaagctgatttcgcctcaggatctaaatttaactgct
gtaaatgaaagtatcttaatagaaaacctggaaatcttcagaaaaaatggttttgatttt
gtcattgatgaagatgctcctgtaacccaaagagtgaagctagtttctttgccagtgagc
aaaaactggacttttggtccacaagatatagaagaattaatcttcatgttaagcgattgc
ccaggagtgatgtgcaggccttccagagtaaggcagatgtttgcttctcgggcctgtcgg
aagtctgtgatggttggaacagcactgaatgcgaatgagatgaagaaagtcatagctcac
atgggagagattgagcatccttggaactgtccccatggaagacctacaataaggcatata
gccaacttggacctgatttcacaagaataa
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