Sceloporus undulatus (fence lizard): 121914897
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Entry
121914897 CDS
T07740
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121914897 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121914897 (CPSF2)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
121914897 (CPSF2)
U7-dependent histone pre-mRNA processing factors
121914897 (CPSF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
121914897
NCBI-ProteinID:
XP_042294620
LinkDB
All DBs
Position
1:352438151..352459776
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AA seq
783 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLADLARVPSPKVVLASQPDLDCGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPSVHKTKHDLMMKGEGNRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKNKLESGLTNGEEPMDQDLSDVPTKCISATESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLVIVHGPPEASQDLAESCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELRDDGEDT
EMQVDASSSDSSTVAQQKVIKSLFGDDDKEICEESEIIPTLEPLPPNEVPGHQSVFMNEP
RLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCEDFYKIRDLLYEQY
AIV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaattatcaagttaaccaccctctcaggggtgcaagaagaatcagctctctgt
tatttacttcaagtagatgagtttcgcttcctattggattgtggctgggatgagaatttt
tctatggacatcattgattccctgaggaaacatgttcatcaggttgatgcagtacttctt
tcacacccagatcctttacatctaggtgcacttccatatgcagtaggaaagatgggtttg
aattgtgctatttatgcaaccattccagtgtacaaaatgggccagatgttcatgtatgat
ctctaccagtcacggcacaatacagaagacttcactttgtttaccctggatgatgtggat
gcggcttttgataaaatacaacaattaaaattttctcagattgtcaacttgaaagggaaa
ggacatggtttgtccataacaccattaccggcaggccatatgataggcggtacaatttgg
aagatagtcaaagatggagaagaagaaatagtttatgcggtagacttcaaccacaagagg
gagatccatttaaatggatgttccctggaaatgttaagtaggccttccttgcttatcact
gattcctttaatgctacctatgtacaaccaagacggaagcaaagagatgaacaactgctg
acaaatgtcctggaaacacttagaggtgatggaaatgtcctaatagctgtggacactgca
ggcagagttttggaacttgcccagctgcttgatcaaatatggaggacaaaagatgccggc
ttaggtgtctactctttagcccttttaaataatgtcagctacaatgttgtggagttctcg
aaatcacaggtagaatggatgagtgacaagttgatgagatgctttgaagataagaggaac
aatcctttccagtttcgtcatctatctctctgtcatggacttgcagatttggctcgagtt
cctagtcccaaagtagttcttgccagtcagccagatctggactgtggattttcaagagat
ctctttatacaatggtgtcaggaccccaaaaactctatcattttgacatatagaaccact
cccgggactctggcacgatttctaatagataacccttctgaaaaagttatagacatagag
ttgaggaaaagggtcaaacttgaaggaaaggaacttgaagagtacctggagaaggagaaa
ctcaaaaaagaggcagctaaaaaattagaacagtcaaaagaagctgacattgattccagt
gatgaaagtgatgcagaagaggacattgatcaaccatctgttcataaaactaaacatgat
ttgatgatgaaaggggaaggtaaccggaaaggaagcttcttcaaacaggccaaaaagtct
tatcctatgtttccagctccagaagagagaattaaatgggatgaatatggagagattatc
aaacctgaagatttccttgttccagaattgcaggcaacagaggaagaaaaaaacaagtta
gaatcagggcttacaaatggagaagaacctatggaccaggatttatcagatgttcctacc
aaatgcatttcagcaacagaatcaatggaaataaaagctcgtgttacatatatagactat
gaaggtcgatcagatggggactccattaaaaaaatcattaatcagatgaagccacggcaa
ttggtcatcgtccatggaccacctgaagccagtcaggatcttgcagagtcctgtagagct
tttggtggaaaagatatcaaagtttacatgcccaaactgcatgaaactgtagatgcaacc
agtgagactcacatataccaggttaggttaaaagattcccttgtcagttctcttcagttt
tgcaaagctaaagatgctgaattggcatggatagatggagtcctagacatgcgggtttca
aaagtggacactggagtgattttggaagaaggggaactgagagatgatggagaagacacg
gaaatgcaagtggatgcttcctcttcagattccagtactgtagcacagcaaaaggtcata
aagagtctctttggagatgatgacaaagaaatatgtgaggagagtgagatcatccctact
ttggagcccttgcctccaaatgaggttcctggacatcagtctgtcttcatgaatgaacca
aggctgtctgactttaagcaggttctactgcgagaaggaatccaagctgaatttgtagga
ggagtccttgtatgtaacaacttggtagctgtacgcagaactgaaacaggacgtattgga
ttggaaggctgtctctgtgaagacttctataaaattagagatcttttatatgaacagtat
gccattgtctaa
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