Sceloporus undulatus (fence lizard): 121915026
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Entry
121915026 CDS
T07740
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sund03000
]
121915026 (NPAS1)
Transcription factors [BR:
sund03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121915026 (NPAS1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
121915026
NCBI-ProteinID:
XP_042294780
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Position
9:22413439..22460478
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AA seq
852 aa
AA seq
DB search
MAALYGSEVKCVSVEWDFLQGLLVKNQPVPCLQALRKEKSRNAARSRRGKENFEFYELAK
MLPLPGAITSQLDKASIVRLTISYLKMRDFANHGDPPWSLRAEGPSSAGKASGRRSVNPL
LTELFEQHLGGHILQSLDGFVFVLNQEGKFLYISETVSIYLGLSQVELTGSSIFDYVHPG
DHLEVAEQLGLKTPSDPSRPNRHKTSHVAGAIAATASSGLSEASESDPIDSRAAEDNALE
RSFFIRLKSTLTKRGLHVKTSGYKVIHVTGRLRARLPSFSHSHSALGRVMGLVALAHTLP
PSTLSEVRIECHMFVFRVNMDLQIVYCESRISDYMDLCSSELVGKSCYRFIHGEDVEGIR
QSHLDLLNKGQVVTRYYRWLQKNGGFVWVQSCATISVNVKNPSEKNMVWVNYILSKPEYK
NTVLDVFQLSGIPAKQTDTAEMGADFKESSLAKESSQRKLYSPNKPGSLAEAYPRGAMEV
GAHSHTVETDSSGPEMSYRDEEASEEGGSSDVEGPPGKRIKLEFQPESPPGEAKEASLAS
SEDSDSGSASELDLLPQPRGTLVRKVNGCKVGGRRTLGASRSCTSEFTSVIQTQKSLAPK
ANPALNIKSEQVPGVKGGLWTCPTAQKGSPYTVNKALSLEKPAMRHGSSHLYVSIPDSVL
TPPEMESGAAKGPFGSSPRPLPPAPSSADTLSPPLSGSPCEERVTSTPFTPLVYPAEMEA
LQRFHTNNVVVPLVHQLGNPHASATGSQGLYTTSTIRYAPADMTLAMQSNMLPPAHPLSL
MDIGSTEAKTSRELMYHHLQRLNMVAPFGNSAGLAQISGGTFAATDSLFSTLPFSVAGGG
LHSASALERKED
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctgtacggaagtgaggtgaaatgcgtcagcgtcgaatgggacttcctgcag
ggcctcttggtgaagaatcaaccggtgccctgccttcaggccttgcggaaggagaaatct
cgcaacgcggcacgctcccgccggggcaaggagaacttcgaattctacgaactggccaag
atgttgccgttgcccggagccatcaccagccagttggacaaagcctccatcgtccgcctc
accatcagttacctcaagatgcgggattttgccaaccatggagacccaccttggagtttg
cgagcggaaggcccttcctcggctggcaaagcttcgggccggagaagcgtgaacccactc
ctgacggagctctttgaacagcacctggggggccacatcctgcagtccctggatgggttt
gtgtttgtgctgaaccaagagggaaaattcctttacatctctgagacggtgtctatttac
ctcgggctctcgcaggtagaactgactggaagcagcatcttcgattatgtccatcctggg
gaccacctggaagtcgctgagcagctgggtctgaagacgccctctgacccttcgcgccca
aatcgccacaaaacatcccatgtggcaggtgccattgccgccactgcttcttctgggctg
tctgaggcctccgaatctgatcccattgactcccgcgctgcagaagacaatgccttggaa
cgctccttcttcatccgcctgaaatccactctgaccaagagagggcttcatgtcaaaacg
tctggctataaggtgatccatgtgacggggcgcctccgcgctcgcctgccgtccttttcc
cactcccattcggcactgggccgcgtgatgggtctggtggcgctggcccacaccctgcct
ccgtccaccctcagcgaggtgcgcattgagtgccacatgtttgtcttccgggtcaacatg
gacctgcagatcgtgtactgtgagagcaggatcagcgattatatggacctgtgttcctcg
gagctggtgggcaaaagctgttaccggttcatccatggcgaggatgtggaaggaatccgg
caaagccacctggacttgttgaacaaggggcaggtggtcacccggtattaccgctggctg
cagaagaacggtggcttcgtgtgggtccagtcctgtgccaccatctcggtcaacgtcaag
aacccaagtgagaagaacatggtttgggtgaactacatcctcagcaaacctgaatataag
aacactgtgctggatgtcttccaactgtccggaatccctgcaaagcagacggatacggct
gaaatgggggcagatttcaaagagagcagccttgctaaggagagtagccaaaggaagctt
tactcccccaacaaacctgggtccctggcagaggcctatcctaggggtgcgatggaggtt
ggggcccattcccacacggtggagaccgattccagtggtcctgaaatgagctaccgagac
gaagaggcttcggaagaagggggcagcagcgacgtagaagggccccccggaaagcgcatc
aaactggagttccagccggagagcccaccaggtgaggcaaaggaggcctccttggctagc
tctgaggattcggacagcggcagtgcatcggagttggacctcctcccacagcccaggggg
accctagttaggaaagtcaacggctgcaaggttggcggacggaggaccctaggtgccagc
cgctcctgcacatcggagttcacctcggtcatccagactcagaagagtttggctcccaaa
gccaacccagcacttaatatcaagtctgagcaagtccccggagtcaaggggggcctgtgg
acctgtccgactgctcagaagggcagcccttacactgtgaacaaagcacttagcctggag
aagcctgctatgaggcatggatcttcccatttgtacgtctccatcccggactcggtactc
actcctcctgagatggagagtggtgcagctaaagggccgtttggcagttccccccggccc
cttccgccagccccttcctctgcggacactctctcgcccccactctcaggctccccctgc
gaagaaagggtcacgtcgacgccattcacccctctagtctacccggcggagatggaggca
ctccagcgcttccacacgaacaacgtggtggtgccgctggtccaccagcttggcaaccca
catgccagcgcaacaggctctcagggcctatataccaccagcacgatccggtatgcccct
gccgacatgaccctcgccatgcagagcaacatgctgccccccgcccacccactcagtctc
atggacatcggaagcaccgaggccaagacgtcccgggaactcatgtaccaccacttgcag
cggctgaacatggtggcaccctttgggaactctgcaggcctggcccagatttcaggggga
acatttgctgctactgactccttgttttccacgctgcccttctcggtggccggcggtggg
ctccatagtgcatcggctctggaacgcaaggaggactga
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