Sceloporus undulatus (fence lizard): 121915107
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Entry
121915107 CDS
T07740
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04120
Ubiquitin mediated proteolysis
sund04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121915107 (SYVN1)
04120 Ubiquitin mediated proteolysis
121915107 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sund04121
]
121915107 (SYVN1)
Enzymes [BR:
sund01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121915107 (SYVN1)
Ubiquitin system [BR:
sund04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121915107 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
121915107
NCBI-ProteinID:
XP_042294901
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Position
9:28317422..28331017
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AA seq
629 aa
AA seq
DB search
MLRTAIMMAASLALTSAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMVLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYILHSIDLQSENPWDNKAVYMLYTELFTGFIKVLLYVAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSQTPPEQQEGAQQQQPPHQ
TPLIPQPPNFPQGILPPFPPGMFPLWPPMAPFPPVPGVQPPNNTDNPSAATPSTSGAQVA
GTSRPRSDSASTSEAAAAAASTGTVPGFPFPPPWMGMPFPPLFGFPPMPVPPSGFAGLTE
EELRAMEGHERQHLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGTPRPAQPPSAPATS
ASSPETPVPEPGTTEPTTVFQPEDKTSSPATETEASGQAGLFSGEGAEGYTEPSGHKQNG
EDSLPEEPDAAELRRRRLQKLELPSSSSH
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgttacgaacagccatcatgatggctgccagcctggccctgacctccgctgtggtggct
cacgcctattatctcaagcaccagttctatccaacggtggtctacctgaccaagtccagc
cccagcatggcggtcctgtacatccaggcttttgtcctggtgttcctgttgggcaaattc
atgggcaaagtgttttttggacagctccgagcggcagagatggagcatctacttgagcgg
tcatggtatgcagtgaccgagacctgccttgccttcacagtcttcagggatgacttcagc
ccacgctttgtggctctgttcaccctcctcctcttcctcaagtgcttccactggttggct
gaggaccgggtagactttatggagagaagtcctaacatttcctggctctttcatttccgc
attgtctctttaatggttctcctgggcatcctggatttcctgtttgtcagccatgcttac
cacagcattctcacccggggagcctctgtccagctggtctttgggtttgagtatgccatt
ctcatgacaatggtgctcactatattcatcaaatatatcctgcactctattgacctccaa
agtgaaaacccctgggacaacaaggctgtctatatgctttatacagagctcttcacaggt
ttcatcaaagtcctcttgtatgtggccttcatgaccatcatgataaaagtacacaccttc
ccgctgtttgcaatccggcccatgtatctggctatgaggcagttcaagaaagccgtgaca
gatgccatcatgtcccgccgggccatccgcaatatgaacaccctgtatcctgatgccacg
ccagaagagctgcaggccatggacaatgtatgcatcatttgccgagaggagatggtgaca
ggagcaaaacgcctgccttgcaaccacatattccacaccagctgcctgcggtcatggttc
cagcgtcagcagacctgccccacttgtcggatggatgtcctccgtgcctctctccccact
cagtctcagactccccctgagcagcaggagggtgcgcaacagcaacagccaccgcatcag
accccactgatcccccagcccccaaactttccccaaggcatcctgccaccttttcctccg
ggaatgttccccctgtggccccccatggctccgttccctccagtgcctggtgttcagccg
ccgaacaacacagacaatccttcagcagccactccttccacatcaggagctcaggtagca
ggaacatcaaggccaaggagtgactcggcctccacatccgaagctgccgctgccgctgcc
tccacagggacggtgccaggattcccctttcctcccccttggatggggatgcctttcccg
cctctctttggtttccctccgatgccagtgccgccctctgggtttgcaggactgacggaa
gaagaactgcgagctatggaaggccatgaacggcagcacctggaagcccggctccagtgc
ctgcagaacattcacacacttctggatgcagccatgcttcagatcaaccagtacctcact
gtgttggcaacgatcgggacaccccgacctgcacagccaccaagtgctcctgccacctca
gcatcatctccagagacccccgtccctgaacctggtactactgagcccaccactgtcttc
cagcctgaagataaaacttcttcaccagcaacagagacagaggcatcagggcaagcaggc
ctgttctcgggcgaaggtgccgaaggttacacagagccatctggccacaagcagaacgga
gaggactctttgccagaggagccagacgcagcagaactgcgccggcgccggctccaaaaa
ctagaattgccatcttcctcttctcattga
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