KEGG   Sceloporus undulatus (fence lizard): 121915127
Entry
121915127         CDS       T07740                                 
Symbol
SNRPD2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
sund  Sceloporus undulatus (fence lizard)
Pathway
sund03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sund00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121915127 (SNRPD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sund03041]
    121915127 (SNRPD2)
   03032 DNA replication proteins [BR:sund03032]
    121915127 (SNRPD2)
Spliceosome [BR:sund03041]
 Complex A
  U1 snRNP components
   Sm proteins
    121915127 (SNRPD2)
  U2 snRNP components
    121915127 (SNRPD2)
 Complex B
  U1 snRNP components
    121915127 (SNRPD2)
  U4/U6.U5 tri-snRNP components
    121915127 (SNRPD2)
 Complex C
  U2 snRNP components
    121915127 (SNRPD2)
DNA replication proteins [BR:sund03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     121915127 (SNRPD2)
SSDB
Motif
Pfam: LSM Hfq GIT1_C Ldh_1_C
Other DBs
NCBI-GeneID: 121915127
NCBI-ProteinID: XP_042294943
LinkDB
Position
9:complement(21111989..21114549)
AA seq 118 aa
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLIAGK
NT seq 357 nt   +upstreamnt  +downstreamnt
atgagccttctgaacaagcccaagagcgaaatgaccccggaggagctgcagaagcgagag
gaggaagagttcaacacagggcccctctctgtcctcacgcagtccgtcaaaaacaacact
caggtgctgatcaactgtcgcaacaacaagaagctcctgggccgcgtcaaggccttcgac
aggcattgcaacatggtgttggagaacgtcaaggagatgtggacggaggtacccaagagc
gggaagggtaagaagaagtcgaagcccgtcaataaggatcgctacatttctaagatgttc
ctgcgtggcgattcggtcattgtggtgctgaggaacccccttattgctggaaagtaa

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