Sceloporus undulatus (fence lizard): 121915257
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Entry
121915257 CDS
T07740
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121915257 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sund03000
]
121915257 (ARID1A)
03021 Transcription machinery [BR:
sund03021
]
121915257 (ARID1A)
03036 Chromosome and associated proteins [BR:
sund03036
]
121915257 (ARID1A)
Transcription factors [BR:
sund03000
]
Eukaryotic type
Helix-turn-helix
ARID
121915257 (ARID1A)
Transcription machinery [BR:
sund03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121915257 (ARID1A)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121915257 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
121915257
NCBI-ProteinID:
XP_042295236
LinkDB
All DBs
Position
9:complement(1108351..1232472)
Genome browser
AA seq
2345 aa
AA seq
DB search
MAAQVANNAANANPAGSLGAPPVPSSELKKAEQQQQQRDCAPEEAAATEASSDRSLGEKP
SEGEGVAAQPAPPGKELQDGPGGESNGGGAGEAELKSPNGNPGPRPLSALNNNLPEPGGG
GGGNGSNSSSSSSSDGVGTPPQQQQPQPPSQPPPPPPSLSHPASSSSSSAASALPPPGYG
FGQPYGRGGALAAAAAAAAAAAAAAFHQHGGQQSPGMAALQSGGLEQTYPVPSAGAPGPP
PPPPQNSHGGGGAEHGFPNHQYNNYYPASSASAASSGARGTVVGAAYQPPAPQAYALSSP
RSPAQAGVKPPGAAFQQQQQQQQRFVGMGPSSSSSSSSSSSSSSTPQPTSTPTLNQLLTS
PSSARGYQGYPGADYGSGAQDGGAKAPTAAAASAVDLASQYPGASGQGWAAAAAAAAGGQ
QRSHHAPMSPGSSGAGAGGQPLARSQQPSSPMDQMGKMRPQPYGGNNLYTQQQGTQSGQP
QGHGYPGQPYGPQTPQRYPMGNLSRTQATMGGVSYAQQIPPYAQQGPSGYGQQSQTPYYN
QQSPHPQQQQPSYAQQPPSQTPHAQPSYQQQQTQSQPPQLQSSQPPYSQQQSQPPHQQSP
SPYPQQPTTAQQQHPQSQPPYSQQQSQSPYQQQQQQQQAQQSATSALSQQSASYSQSQSQ
QQSAYSQQRFPPPQELSQDSFGSQASSAASMASSKGQEDVNLNLQSRPSSLPDLSGSIDD
LPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQ
SRSGPLSPAAVPGNQMPPRPPSGQSDSILHTSMNQSTIAPDRGYIQRNPQMPQYNSPQPG
SALSPRQSSGGQMHAGMGPYQQNSMGSYGPQGAQYGPQGGYPRQPNYNPMPNANYPNPGM
GGTMNPMGAGSQIHGQTGVPPYPGLPPGRGLTHPAMGNRPYGPNMANMPPQVGTGMCPPP
GGRKAQEAAAAAMHAAAVNSIQNRPSGYPHINQGGMMGTGPPYGQGINSMAGMLNPQGPP
YQMGGNMANNSAGMAASPEMMGLGDVKLTPAAKMNNKADGTPKAESKSKKSNSSTTTNEK
ITKLYELGGEPERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQV
NKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFATDSKKSQP
KIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLQGIRSNSVGLQD
TFPDGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGTMRKGSDPFMSSAQG
PNTGMGDPYNRATGPGMSNMAMGQRQHYPYGPYDRVRTEAGLGPEANLGTGTPQPNIMPS
TPDSGMYSPSRYPQQSQQRHDSYGNQFPTQGTSSGSPFPSQQTTLYQQQQQNYKRPMDGN
YGPPAKRHETEMYNVPYSAGQGQTQQQLPPAQTQPASQQQTAQPSPQQEIYNQYSNTYSA
TDRRPPAGPQNQFPFQFGRERVSAPPGASTQQNMPPQMMGGPIQSTPEGPQQGTMWQGRN
EMGYSYPNRQNTGSATQGPAYHAVNRTDEMLHPDQRGNHEGPWPSHSNRQPPYGPSAPVP
PMTRPPQPNYQTPPSMQNHIPQVSSPAPLPRPVENRTSPSKSPFLHSGMKMQKAGPPVPA
SHITPAAVQPPMIRRDITFPPGSVEATHPVLKQRRRLTTKDIGTPEAWRVMMSLKSGLLA
ESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQK
TLLDPDRINKSSSPPPEEGEKQEPRSTNCEEEEEQEEEEEEGEEEAAFANKATAPLENSE
EKLVSKFDKLPVKIVQKNDPFVVDYSGKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESK
MELSLTHKRASCNSVLLRKRSVTEGNPVAREGESPPSDGPPEKRITATMDDMLSARPGSL
AEEEEVVKHVETTKEGGKFPFGINPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLSKR
CICVSNIIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQG
VSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPILDGLLHWAVCPSAEAQ
DPFPTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGTMVRFLSDRKN
PVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLMHMQN
APFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLF
LIGQS
NT seq
7038 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtggccaacaacgccgccaacgccaaccccgccggcagcctgggcgct
cccccggtgccctcctccgagttgaagaaagccgagcagcagcagcagcaaagggactgt
gcgccggaggaagcggcggccacggaggcctcgtcggaccgcagcctcggagagaagccg
tcggagggcgaaggggttgctgctcagccggcgccgccggggaaggagctgcaggacggg
cccggcggcgagagcaatggcgggggcgccggggaggccgagctgaagagccccaacggc
aacccggggcctaggcctttatccgcgctgaacaataacctcccggagcccggaggagga
ggaggagggaacggcagcaatagcagcagcagcagcagcagcgacggggtggggacgcct
ccgcagcagcagcagcctcagcctccttctcagccgccgcctccgccgccctcgctgtcc
cacccggcttcctcctcctcctcctccgcggcctcggccttgccccctccgggctacggc
ttcgggcagccctacggccgaggaggggccctcgcggcagccgccgccgccgctgctgct
gctgccgcggcggctttccaccaacatggcggacaacaaagccctggcatggcagcgctg
cagagcgggggcctggagcagacctacccggtgccctccgctggggcccccggccctcct
cctcctcccccacagaactcccacggaggagggggcgccgagcacggcttccccaaccac
cagtacaacaactactacccggcctcctctgcctcggccgcctcctcgggggcgcgcggc
actgtcgtcggcgctgcctaccagcctcccgccccgcaggcctacgccctgagctcccct
cgcagccccgcgcaggccggggtcaagccccccggggccgccttccaacagcagcagcag
cagcagcaacgcttcgtgggcatggggccttcttcctcctcgtcctcctcctcctcgtcg
tcgtcctcctccaccccgcagcccacctccaccccgacgctgaaccagctgctcacctcg
cccagctccgcccggggctaccagggctacccaggggccgactacgggagcggggcccag
gacggaggagccaaggccccgacggcagcagcggcatcagcggtggaccttgcttcccag
tatccgggggcctctggccagggctgggcggcagcggcagcggcggccgccggagggcaa
caaaggagccaccacgcgcccatgagccccgggagcagcggggcaggagccggagggcag
ccgctcgccaggagccagcagccatccagccctatggatcagatggggaagatgaggcct
cagccttatggaggaaacaacctatacacacaacagcagggaactcagtcagggcaaccg
caaggccatggctatccagggcagccatacgggcctcagactccccagagatatccaatg
ggaaatctaagcaggacgcaagctacaatgggtggtgtctcttatgcacagcagattcct
ccatatgcacagcaaggtcctagtggatatgggcaacagagccagactccctattacaac
cagcagagtcctcatccgcagcagcagcagccttcctatgcccagcaaccgccgtctcag
accccacatgctcagccttcttatcagcaacaacaaactcagtctcagcccccacagctt
cagtcatcccagcccccttactctcagcagcaatcacagccaccacatcagcaatctcca
tctccgtatcctcagcagccaaccactgcccagcagcagcatccacagagtcagcctccc
tattctcagcagcagtctcagtcaccctaccagcagcagcaacagcagcagcaagctcag
cagtctgctacctctgcgctttcccagcagtcggcatcctattctcagtcacagtcacag
cagcagtcggcatattctcagcagcgcttcccacctccacaggagttatcgcaagactca
tttgggtcccaagcatcatctgctgcctcaatggcttccagtaaagggcaggaagatgtg
aatttaaatcttcagtcaagaccctctagcttgccggatctctctggttcaatagatgac
ctacctatgggtacagaaggagcactgagtcctggcgtaagcacatcagggatttccagc
agccaaggagagcagagtaatccagctcagtctcctttctctccgcatacctctcctcac
ttgccaggtattagaggaccttccccatcaccagtgggatctcctgcaagtgttgctcag
tcacgctctggcccactctctcctgctgcagtaccaggcaaccagatgccacctcgacca
ccaagtggccagtcagacagcatcttgcatacctccatgaatcagtcaaccatagcccca
gatagaggttatatacagaggaatccacagatgcctcagtataattctcctcagcctggg
tctgccttatctccccgccagtcttctggaggacagatgcatgctggaatgggaccttac
caacaaaattccatgggcagttacggacctcagggggctcagtatggtcctcaaggtgga
tatccaaggcagccaaactacaatcctatgcccaatgcaaattaccccaacccaggaatg
ggaggaaccatgaaccccatgggagcagggagtcaaatccatggtcagactggtgtacca
ccctatcctgggcttcccccagggagaggtttgacacaccctgccatggggaataggccc
tatggacccaacatggcaaacatgcctccccaagtaggaactggaatgtgtcctccacca
ggtggcaggaaagcacaagaagctgctgctgctgctatgcatgctgctgctgtcaactca
atccagaacaggccatctggttacccccatattaatcaaggaggaatgatgggaactgga
cctccctatggccaaggaattaatagcatggctggcatgctcaatccccagggcccacca
tatcaaatgggtgggaatatggcaaacaactctgcagggatggctgcaagtcctgagatg
atgggacttggggatgttaaactaacacctgcagcaaagatgaacaataaggcagatgga
acaccaaaagctgagtccaagtcaaagaaatctaattcctccactactacaaatgagaag
attactaaactatatgagcttggtggtgaaccagaaagaaagatgtgggtagatcgctat
ttggccttcactgaagagaaagcaatgggcatgaccaatcttcccgctgtgggccggaaa
cccctagacctgtaccgtctctatgtctccgtgaaggagattggagggctaactcaagtt
aacaaaaacaagaaatggcgtgagttagcaaccaatttgaatgtgggtacctctagcagt
gcagctagttccctgaagaagcagtacatccagtgtctctatgcctttgagtgcaagatt
gagcgaggcgaagatcctcccccagacatctttgcaaccgattcaaagaaatcgcaaccc
aaaatacaacctccatcgccagcgggttcaggctccatgcaaggtcctcagacacctcag
tccaccagtagctccatggctgaaggaggagacctgaagcccccaactcctgcatctaca
ccacacagtcagatgccccctttgcaaggcatcaggagtaactcggtaggccttcaggac
acattccccgatggcagtgaccctactttccagaagagaaactccatgactccaaaccca
gggtaccagcccagcatgaatacgtccgacatgatgggccgtatgtcttatgagccaaat
aaggatccctatggcactatgagaaaaggaagcgatcccttcatgtcctcagcacagggc
cccaacactggtatgggtgatccttataaccgtgctacaggtccagggatgagtaacatg
gccatggggcaaaggcaacattatccttatggtccttatgacagagtgaggactgaagca
ggattgggacctgaggcaaatttaggaaccggaactccccaacccaacatcatgccttcc
actcctgattcagggatgtactctcctagccgctaccctcaacagtcacagcagcgacat
gattcctatggcaatcaatttcccactcaaggtacatcctctggcagtccatttccaagc
cagcaaactacgctttatcagcaacaacagcagaattacaagcgaccaatggatggtaat
tatggccccccagccaaacgacatgaaacagagatgtacaatgtaccatacagtgcaggc
cagggacaaacccagcaacaactgcctccagcacagacccaaccagctagccagcagcaa
actgctcagccttctcctcagcaagaaatctataaccagtattcaaatacatactctgcc
acagaccgccgacctcctgctgggccacagaaccagttcccattccagtttggcagagag
agagtctctgctcccccaggtgccagcacacagcagaacatgcctcctcagatgatgggt
ggccccatacagtctactccagagggcccacagcagggcaccatgtggcaagggcgtaat
gaaatgggttacagctaccccaaccgacagaatactggctctgcgacgcaagggcctgcg
tatcatgcagtgaatcgaacagatgaaatgctacatccggatcagcggggtaatcatgaa
ggaccatggccttcacatagcaaccgccagcctccttatgggccctctgcccctgtgccc
ccaatgacgagaccgccccagcccaactatcagaccccaccgagcatgcagaatcacatt
cctcaggtatctagtccagcacctcttcccaggccggtggaaaaccgcacttctccaagt
aaatctccgttcctgcactcgggaatgaaaatgcagaaggcagggcctcctgttcctgcc
tcacatataacgccagcagctgtacagcctcctatgatacgacgggacatcacattccca
cctgggtcagtggaagctacgcaccctgtgctgaagcagcgacgccgcttaactacaaaa
gatattggaactcctgaagcatggagagtaatgatgtctctgaagtcaggattgctggct
gaaagtacgtgggccttagatacaataaacatccttctgtatgatgacaacagcataatg
accttcaacctcagccagcttccagggttgttggagctactggtggaatatttcagacgc
tgcctaattgaaatctttggaatcctgaaggaatatgaggtgggagatccgggtcaaaaa
acactattggatcctgataggatcaacaagtcttcgagtcctcctcctgaggaaggagag
aaacaagagccacgaagtactaactgtgaggaagaagaagaacaggaggaggaagaagag
gaaggggaggaggaggctgcctttgcaaataaagccacagcacctcttgagaactctgag
gaaaagctagtgagcaaatttgacaaacttcctgtcaagatagtgcagaagaatgaccca
tttgtggtagattattcaggcaaacttggccgggttcaggagtttgagagtgggttgctg
cactggcggattggtgggggagacaccactgaacatattcagacccactttgaaagcaaa
atggagctgtcgttgactcacaaacgagcatcctgcaactctgttttgttgcgaaaacgt
tctgtcactgagggtaacccagtcgcccgagagggagagtccccaccatctgatggtcct
ccagagaaaaggataacagccaccatggatgacatgctttcagcacggccgggctccctg
gcagaggaagaggaggtggtaaaacatgtggagacaacaaaagagggtggtaaatttccc
tttggcattaatccagctcagagccaccgaaacattaaaatcctggaggatgaacctcac
agtaaggatgagacaccactctgcacgcttctagactggcaggactcattgtctaaacgc
tgcatctgtgtgtcgaacatcatcaggagtttatcatttgtgccaggcaatgattttgag
atgtctaaacaccctggtttgctgctgatcctagggaaactgattctcctgcaccataag
catccagaacgcaaacaggcaccactgacatatgagaaggaagaggaacaggaccaagga
gtgagctgcaacaaagtggagtggtggtgggactgcttggagatgctacgtgaaaacact
ttggtcacgctggccaacatctctggccagctggatctttcgccgtacccagagagcatc
tgtttgcccatcttggatggactcctccattgggccgtgtgtccttcagcagaagcccaa
gatcctttcccaaccctaggccctaatgctgtcctctcccctcaaagactggttttggaa
accctcagcaaactcagcatccaggacaacaatgtggatttgattcttgcaacgccaccc
tttagtcgcttggagaaactctacggcaccatggtgcgtttccttagtgaccgaaagaac
ccagtgtgtcgggagatggctgtggtactactggccaacttggcgcagggcgacagcttg
gcagctagagccattgctgtacagaaaggcagcattggcaacttgttaggcttcttggag
gacagcctggcggccactcagttccaacagagtcaagccagtttgatgcacatgcaaaat
gctccctttgagccaaccagtgtggacatgatgcgtcgggcagcccgggcgctgcttgcc
ctggccaaagtggacgaaaaccactctgagttcacattatatgagtcacggctgttggac
atctccgtgtcacctctgatgaactccttggtttcacaagttatttgtgatgtactgttt
ttaattggccagtcatga
DBGET
integrated database retrieval system
