Sceloporus undulatus (fence lizard): 121915490 Help Entry 121915490         CDS       T07740                                  Symbol COL16A1 Name (RefSeq) collagen alpha-1(XVI) chain   KO K24339   collagen type XVI alpha Organism sund  Sceloporus undulatus (fence lizard) SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Laminin_G_3 Laminin_G_2 Motif Other DBs NCBI-GeneID:  121915490 NCBI-ProteinID:  XP_042295739 LinkDB All DBs Position 9:complement(13066771..13188471) Genome browser AA seq 1559 aa AA seqDB search MRRTGLPIACLVGIFFGTCRGGKLLTSPEVEKCPQMQKEGLRLDQSSEEYVNITGFNLIK RFALLKTSAIKKIRNPKGPLILRLGSTPLVRPTKQLFPLGLPDEFTLVITLLLKKQTTKE NWYLFQVADQQGYPQFSLGINSKERSLEFQAKGQEEEFVSAIFTGKGVSSLFDLKWHKMV LNVQSQVVSIHIDCSYISSKPLQLRRQLAMEGNAFVGLDAVQGAPVSFDIQQLHIYCDPA MAMHEGCCEISDNGCFPEASKTRRDVEVMQSNDLIEINPQTEGKVYTRCFCLEEPQSKQE LTSGKIGVKGDEGKTCPPCLQRSPHANETLGPPGLKGGKGERGPSGSHGSKGEKGDRGAD CVRISPEAPLQCAEGPKGEKGERGEKGPSGLAGSLGQKGQKGEKGDYGIQGKPGSPGRDG RPGEICVVGPKGQKGDPGFVGPEGLAGEPGPPGKPGPPGAGLPGKPGDPGGPPGPKGEKG GSGPPGPGGSTGKPGKPGVPGLKGDKGDPCEVCPTIPAGITNAIGLPGKTGPKGEPGPPG KPGKVEKVGSPGLKGDRGDPGLQGIKGEKGASCLSCNVAASSSQFPAKEGPKGEPGAPGT GIPGLPGKAGPPGLAGTKGEKGDTGTAGPMGKPGLHGDKGDTGSSGVKGEKGEPCTECSA ASLEGGKPTVAIPGPPGEKGEPGLPGIGLPGKAGKAGESGMKGQKGDAGNPGDPGTPGTP GLPGLSGDPGVRGPSGAKGEKGDACDSCPIFTGDPSGAIGIPGKPGPKGDRGLPGVGQPG KPGKPGLPGIQGPPGLKGLQGEPGPPGRGIQGPQGELGEKGIPGNPGPPGPRGPPGNAGE KGGKGSPGLKGATGLPGPPGASITGPPGPEGQSGPPGAPGPSGLMGEKGARGEKGDAGEC TCQPGSRMDPSLVGLPGAPGLWIGTSWQPQPGPQGPPGAPGPPGPPGAPGRQGIPGHNGL PGLPGSAGDLGPLAAESIDIFKICRDCAQNPSSQVSNGVKGEKGDQGMPGAPGIDNCARC FAQFPRAEEARGDSDNDQDCLGGPGLPGVPGLPGDRGEQGPPGSRGSPGPPGPIGTPGFP GTPGAPGLPGLQGERGPAGFPGSKGEPGFQGQPGFPGPPGPPGFPGKAGTPGPPGPQAEK GSEGMRGAPGMSGPPGPPGPPGMQGPPGLDGLDGKDGKPGIRGDTGPPGTPGRMGPPGFK GKTGHPGLPXXXGDCGTAGPPGSPGRTGPEGEPGPMGPQGRPGPPGHLGPPGSPGQPGPS GLAGVGLKGERGSPGERGLAGMPGQPGPPGHPGPPGEPGSDGQVGKEGPPGKPGPTGPAG VKGESGSAGERGHPGERGRPGMPGGPGKSGEMGPIGPRGPSGERGQPGPPGPSGSPGTPG LPGTMADAVNYDEIRRFIRQELNKMFDERMAYYTSRMQFPVEMASQPGRPGPPGKDGTPG RPGPPGSPGMPGQIGREGRQGVPGMRGEPGAKGEKGDKGIGIMGETGLPGPPGIPGPPGY GKIGLPGPMGQQGIPGIPGPPGITGPPGKAGHCNPSDCFGMMPLEQPMYQPKNMKGPLG NT seq 4680 nt NT seq  +upstreamnt  +downstreamnt atgaggagaactgggcttcccattgcatgcttggttggcatcttctttggcacctgcaga ggagggaaactacttacatctccagaagtggagaagtgtccacagatgcagaaggaaggt ctacgcttggaccagagcagcgaggaatatgtcaatatcaccggatttaatctaattaaa cggtttgctctcctgaaaacctccgccattaagaaaatccgtaaccccaaaggcccgctg atcctgcgtctgggcagcacccctctggttcgacccacaaaacagctgttccccttgggc ttgccagatgaattcaccttagtgatcactctactcttgaagaagcagaccaccaaagag aactggtacctcttccaagttgctgatcagcagggataccctcagttctccctgggcatc aacagcaaagagcgaagcctggagttccaggccaagggccaggaggaggaatttgtcagc gccatcttcaccggcaaaggagtctcctcgcttttcgacctgaaatggcacaagatggtt ctcaacgtccaaagccaggtggtttccattcacatcgactgcagttacatctcatccaaa ccgctgcagctccgccgacagctggccatggaaggcaacgcatttgtcggactggatgcc gtacagggcgctcctgtctcgtttgatatccagcagctgcacatttactgcgacccggcc atggcaatgcatgagggatgttgcgagatctctgataatgggtgcttcccggaagcttct aaaacccgccgggatgtggaagtcatgcagagcaatgacctgatagagatcaacccccag acggaagggaaagtctacacgcgttgcttctgcctggaggagcctcagagcaagcaggag ctgacatctggaaagattggtgtgaaaggtgacgaagggaaaacgtgtccgccatgcctg cagaggtcaccgcatgcaaatgaaacgctgggtcctccagggctgaagggtggaaaagga gagcgtggaccatcagggagccatggatccaaaggggagaaaggcgatcgcggtgctgac tgtgtccggatctcacctgaagccccattgcagtgtgctgaaggtccgaagggggagaag ggcgagcgaggagaaaaggggccgtcgggattggctgggagccttggacagaagggacag aaaggagaaaagggtgactatgggatccaaggcaaaccaggaagtccgggacgtgatggc cgacctggagagatctgtgtggtgggacccaaaggccagaagggtgacccagggtttgtc ggtcctgaagggcttgctggagaaccggggcctccaggaaaacctggtccacctggagct ggacttccaggaaagccgggtgacccaggtggacccccaggtccaaaaggagagaagggt ggttctggacctccagggcccggcggttcaactgggaagccagggaaaccaggagttcct ggtctgaagggagacaagggtgatccatgtgaagtttgcccaactatccctgcaggaata accaatgctattggcctccctggaaaaactgggcccaaaggggaacctggacctccaggg aaaccgggcaaagtggagaaggttggaagtccaggcctcaaaggcgacaggggggatcct ggactccaggggatcaaaggagagaagggtgcatcatgtctttcatgcaatgttgcagca tcttcgtcacaatttcctgcgaaagaaggacccaaaggagaacctggagctccagggact gggattcctggtcttcctggcaaagctggacctcctggactcgctggaaccaaaggagaa aagggagatactggaactgcaggtcccatgggcaaaccgggactccatggggacaaaggt gacacgggaagttcaggagtcaaaggcgaaaaaggagagccttgcactgaatgctccgca gcttctctcgaaggtgggaagcccaccgtggccatccctgggccgccaggagaaaagggc gaaccgggtcttcctggcatcggactcccagggaaagcaggaaaagctggagaatctgga atgaaaggacagaagggtgatgcagggaacccaggtgatcctgggacaccaggtacgcca ggtttgcccggtctttctggagaccctggtgtcagagggccatcaggagccaaaggcgaa aagggtgatgcttgcgactcctgtcccatctttactggagacccttccggtgccatcggc atccctgggaaacctggacccaagggggaccgcggacttccaggtgtgggccagccaggc aagcctggaaaaccagggctcccaggaattcaaggacctcccggcttaaaggggttacag ggagagccaggtccccccggaagagggatccaaggcccacaaggagaactaggggagaaa ggcataccaggaaatcctggaccaccgggacctcgaggacccccaggaaacgctggggaa aaaggtggcaagggatccccaggtcttaaaggtgccacaggtctccctgggcctccaggt gccagcatcactggcccgccgggtccagaaggccaaagtggccccccgggagctcctggc cccagtggtttaatgggtgaaaagggagccaggggcgagaagggagacgctggagaatgc acctgccagcctggctctcgcatggaccccagtttggttggtctgccgggtgccccagga ctgtggatcgggacttcctggcagcctcagccaggccctcagggaccaccaggtgcgccg ggaccaccaggaccaccaggcgctccagggagacagggcatcccaggacacaatggcttg ccaggactgcctgggtcggcgggagacttggggccattggctgctgaaagcattgacatc tttaagatttgcagagattgtgctcagaacccgtcttcccaagtctccaatggagtcaaa ggggaaaaaggtgaccaaggcatgcctggggccccaggtatcgataactgcgcacggtgc tttgcccagttccccagagcagaagaggctcggggcgacagcgacaatgaccaagattgt cttggaggtcctggccttccaggggttcctggtttacctggtgacaggggagagcaggga ccaccaggttcaagaggctctccaggaccccctgggccaattggaaccccaggttttcct ggaacacctggtgcacctggattacctggtctccagggggaacgtggaccagctggcttt cctggatccaaaggagaaccgggatttcaaggccagcctggtttccccggaccaccaggg cctcccggcttcccaggcaaagcggggacacctggacctccgggtcctcaggcagaaaag ggtagcgaagggatgcgtggcgctccggggatgagtggtccaccggggcctccaggacct cctggcatgcaaggcccacctggtttggacggcttagatggaaaggatggaaaaccaggt atacggggtgataccgggcctccaggaaccccaggaagaatgggacctccaggcttcaaa ggaaaaacaggtcatcccggcctcccagnnnnnnagggcgactgtggcacggcaggacca ccaggcagccctgggcggactggacccgagggagagcctggcccaatgggaccccaaggc agaccaggccctcctggtcatcttggtcctcctggaagccctggtcaacctggtccatct ggacttgctggagttgggctgaaaggagaaagagggtcccctggagaaagaggtcttgct gggatgccaggccaacctggacctccaggtcacccaggaccaccgggtgagccgggctca gatggacaagtcggcaaagagggcccaccaggaaagccaggccctactggaccagctggg gtgaagggtgaaagtggctctgccggggagagagggcaccctggagaaagaggcagacct gggatgcccggagggccaggaaagagtggagagatgggccccattgggccacggggccca tctggggagaggggtcagcctggacctccgggtccttcgggaagccctgggaccccagga ttgcctgggacaatggcagatgctgtcaattacgatgaaatccggaggttcatcaggcaa gagctgaacaaaatgtttgatgagcggatggcgtattacacttcccggatgcagttccca gtagaaatggcatcccagccaggaaggccaggacccccaggtaaagatggcacacctggg cggccgggaccgcctggatctccaggaatgccagggcaaattgggagagaaggacggcaa ggtgtccccggaatgagaggtgagcctggagccaaaggagaaaagggagacaaagggatt ggaatcatgggtgaaactggacttccaggccctccagggatcccaggaccgccaggctat ggcaagattggtcttccagggccaatggggcagcagggtattccaggtataccaggaccc ccggggatcaccggacctcctggaaaagcagggcattgcaacccttcagattgctttggc atgatgcctctggagcaaccgatgtaccaacccaagaacatgaaaggcccattgggctga

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