Sceloporus undulatus (fence lizard): 121915607
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Entry
121915607 CDS
T07740
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase beta-like
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121915607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sund03400
]
121915607
Enzymes [BR:
sund01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121915607
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
121915607
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
121915607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
HHH_5
Cdd1
17kDa_Anti_2
Motif
Other DBs
NCBI-GeneID:
121915607
NCBI-ProteinID:
XP_042295896
LinkDB
All DBs
Position
1:222097127..222098204
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AA seq
331 aa
AA seq
DB search
MSKRKAPQENPNAGITGFVSELANYERNVNRAIHKYNAYRKAASVISKYPSNIKSGAEAK
KLDSVGAKIAEKIDEFLSTGKLRKREKIRQDDTSSSINFLTRVSGIGPDAARKFVDEGIK
TLEDLKKNEHKLNHHQRIGLKYFEDFEKRIPRNEMLEMQEIVLSEVKGVDPQYIATVCGS
FWRGAESSGDMDILLAHPDFTSESPKQPKLLHQVVEQLEKVHFVMDTLSKGDTXCQLPCK
EEGTNYPYRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHVLKKGFTLNEYTIRRLGIT
GVAGEPLPVDSEKDIFEYIQWKYREPKDRSE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaggaaggccccccaggagaaccccaatgctggcatcaccggcttcgtctct
gaactagccaactatgagaggaatgtgaacagagccatccacaagtacaatgcctacagg
aaagcagcttctgtaatatccaagtatccaagcaacatcaaaagtggagctgaagccaag
aaactagatagcgttggagcaaaaattgctgaaaagattgatgagtttttatctactggg
aaattgcggaaacgggaaaagattcgacaggatgatacgagttcttcaatcaatttcctg
actagagttagcggcattggtcctgacgcagccaggaaatttgtggatgaaggaatcaaa
acactggaagatctaaagaaaaatgagcacaaattgaaccatcatcaacggatcggttta
aagtactttgaagacttcgagaaaagaatccctaggaatgaaatgttggagatgcaggaa
atcgtattaagcgaggtcaagggagtggacccccaatacattgctacggtgtgtggcagt
ttctggcgaggtgcagaatcaagtggggacatggacatcctcctcgcccatccagacttc
acatcagaatctcccaaacagccaaagcttttgcaccaagtggtcgagcaactggagaag
gtccactttgtcatggatactctgtcaaagggagacaccnnatgtcagcttccatgcaaa
gaggaaggaactaactacccatacaggagaatcgatattaggttgattcccaaagatcag
tattactgtggagttttgtactttactggaagcgacatattcaataagaacatgcgcacc
cacgtgctgaagaagggcttcacgctcaacgaatacacgatccggcgcttgggcatcacc
ggggtcgctggagaacccctccctgtggacagtgagaaagacatctttgagtacatccag
tggaagtaccgggagccaaaagaccggagtgaatag
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