Sceloporus undulatus (fence lizard): 121915871
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Entry
121915871 CDS
T07740
Symbol
LRFN4
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and fibronectin type-III domain-containing protein 4
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sund04515
]
121915871 (LRFN4)
04990 Domain-containing proteins not elsewhere classified [BR:
sund04990
]
121915871 (LRFN4)
Cell adhesion molecules [BR:
sund04515
]
Immunoglobulin superfamily
SALM family
121915871 (LRFN4)
Domain-containing proteins not elsewhere classified [BR:
sund04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121915871 (LRFN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
LRR_1
Ig_3
ig
Ig_2
fn3
LRR_5
LRR_9
LRRCT
LRR_14
Motif
Other DBs
NCBI-GeneID:
121915871
NCBI-ProteinID:
XP_042296394
LinkDB
All DBs
Position
9:25302871..25309061
Genome browser
AA seq
722 aa
AA seq
DB search
MGQLPAPLPLVPLFLPALLLLLGPQSHCQPPVEACPFHCVCQNLSESLSTLCAHKGLLFV
PPNIDCRTVELRLADNFIQVVEPPDFLNMSGLVDLTLSRNTIDTIRPFAFGDLESLRSLH
LDGNRLTGIPEEALRGLLNLQHLILNNNQLAEVSVGAFDDFVLTLEDLDLSYNNLRRAPW
DGIRGMLSLHTLNLDHNLIDTLPEGAFAELYKLSRLDMTSNRLQTLPPDPLFARAQPGVV
SPTPYAPTVSLGFGGNPLHCNCELLWLRRLGHQDDLETCASPPHVAGRYFWAVPEEEFAC
EPPLITRHTHKLWVLEGQRATLRCRAIGDPEPVVHWVSPDDKIVANSSRTASFRNGTLDI
LVTALRDDGAYTCIAINAAGESTATVDLQIIPLPHRGNGSAPAPQPDPGSSDIATSAKTS
AVNGTSEGGTSAVRRTVEISEVTATSALVRWVADQSSAYTAWMYQIQYNSTVDDALIYRI
IPASGRHFLLRHLVPGVDYDLCILAIFDDAATALAATHLLGCAQFATQEAYPDCRSLHAH
FLGGTLTVIVGGVVVVTLLVFTVVMMVRYKVCGSARASALPKVTHVHSQTNGGHPNGGLL
LLPPQRTPPKEWGPKRQRQGRARARPEGRTGAWCPLPAPSAKTKRSCSLDMGEGPPASSR
GCHSYAKRLSFVWSKRSQSVHGMLGRGGFPEEELEGDPAPAPVAAKRIGPLLSADDLEES
VV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgggccagctgccagcgccgctgcccctcgtgcccctgttcctgccggcactgctgctg
ctactggggccccagtcccactgccagccccccgtggaggcctgccccttccactgcgtc
tgccagaacctctctgagtctctcagcaccctctgcgcccacaagggcctcctctttgtc
ccgcccaacattgactgccggacggtggagctgcgcctggccgacaacttcatccaggtg
gtggagccgccggacttcctgaacatgtcggggctggtggacctgaccctgtcgcgcaac
accatcgacaccatccggcccttcgccttcggggacttggagagcctacgctcgctccac
ctggatggcaaccggctgaccggcatccctgaggaggccctgcgggggctgctcaacctc
cagcacctcatcctcaacaacaaccagctggcagaggtctcggtgggcgccttcgacgac
ttcgtgctgacactggaagacctggacctctcctacaacaacctccgccgggccccctgg
gacggcatccgggggatgctcagccttcacaccctcaacctggaccacaacctgattgac
accctccctgagggggcctttgccgagctctacaagctctcccggctggacatgacctcc
aaccgactccaaacgctgccccccgacccgctctttgcccgtgcccagccgggggtggtc
agccccaccccctacgcccccactgtctccctcggctttgggggaaatcccctgcactgt
aactgcgagctgctctggctgcggcgcttgggccaccaggacgacctggagacctgcgca
tccccgccccatgtggctgggcgctacttctgggcggtgcccgaggaggagtttgcctgc
gagccgccgctcatcacccgccacactcacaagctctgggtgctggagggccagcgggcc
accctgcgttgccgggccatcggagaccctgagccagtggtccattgggtttcccccgac
gacaaaatcgtggccaattcctcccggacggcctccttccgcaacggtacactggacatt
ctagtaaccgctctccgggatgacggggcctacacctgcatcgctatcaatgccgctggg
gaatctacggccaccgtcgacctccagatcatccctctgccgcaccggggcaatggcagc
gcccctgccccacaaccagacccggggtcctctgacattgccacttctgccaagacctcc
gcggtcaatgggacaagcgaagggggcaccagtgccgtgaggaggacggtggagatctct
gaggtgacggccacctcggccctggtccgctgggtagcggaccagtcctcggcctacacg
gcctggatgtaccagatccagtacaactcgactgtggatgacgcgctcatctacaggatc
atcccagccagcggccggcatttcctcctccggcacttagtgcccggcgtggactacgac
ctctgcatcttggccatcttcgacgatgcagccacagcattggcggccacacacctgctg
ggctgtgcccagtttgccacgcaggaggcctacccggactgccgctcgctgcacgctcac
ttcctagggggcaccctgacggtgattgtggggggtgtggtggtggtcaccctgctggtc
ttcaccgtagtcatgatggtcaggtacaaggtctgcgggagcgcccgagcatctgctctg
cccaaggtcacccacgtccactcccagaccaacggcggacaccccaatggtggcctcctt
ctgctgcctcctcagcggacaccccccaaggagtggggccccaagcgccagcggcaagga
agggcccgggcccggccggaagggaggacgggggcctggtgccctctccctgcccccagt
gctaagaccaagcgcagctgctccctggacatgggcgagggcccccctgcttcatcccgc
gggtgccacagctacgccaagcgcctgagcttcgtctggagcaagcgcagccagtccgtc
catggcatgctgggtcgtgggggcttcccggaagaagagctggagggagacccggcgcca
gccccagtggcagcaaagaggatcgggcccctcctcagcgcagacgacttggaggagagt
gtggtatag
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