Sceloporus undulatus (fence lizard): 121916697
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Entry
121916697 CDS
T07740
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03440
Homologous recombination
sund03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121916697 (TOP3B)
03460 Fanconi anemia pathway
121916697 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sund03032
]
121916697 (TOP3B)
03400 DNA repair and recombination proteins [BR:
sund03400
]
121916697 (TOP3B)
Enzymes [BR:
sund01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
121916697 (TOP3B)
DNA replication proteins [BR:
sund03032
]
Eukaryotic type
DNA Topoisomerases
121916697 (TOP3B)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
121916697 (TOP3B)
FA (Fanconi anemia) pathway
121916697 (TOP3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
SR1P
Motif
Other DBs
NCBI-GeneID:
121916697
NCBI-ProteinID:
XP_042297990
LinkDB
All DBs
Position
10:complement(11522883..11539096)
Genome browser
AA seq
726 aa
AA seq
DB search
MNKARGSERTVYRAKFSSITDTDICNAMNHLGEPNHNEALSVDARQELDLRIGCAFTRFQ
TKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVSHEKDSCLT
LDWDRVRVFDREIAQMFLNITKAAKDAKVESVSRKEKAKQRPLALNTVEMLRVASAALGM
GPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKGSLRQQANNPYWAETVNSLLAEGIN
RPRKGHDAGDHPPITPMRSATEAELGGDGWRLYEYITRHFIATVSADCKFLQTTIACSIG
PERFTCIGKTVISLGFTEIMPWQSIPPEENLPSCEKGDVFPISEVKLLEKQTNPPDYLTE
AELITLMEKHGIGTDASIPVHINNICQRNYVTVENGRRLKPTNLGIVLVHGYYKIDAELV
LPTIRSAVEKQLNLIAQGKADYHQVLEHTLDIFKRKFHYFVDSIAGMDELMEVSFSPLAA
TGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGTIKLYKELRCPLDDFELVLW
SSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLNMLGIGQCVECENGVLVL
DPISGPKWKMACNKCNVVVHFFENAHKVRVSAETCESCDAALVDVDFNKAKSPLPGNETQ
HSGCVFCDPVFQDLVELKHAAMKHPMHRGGQGKRQGRGRGKGRRPGGRPNPRKPRDKMAA
LAAYFV
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagctcgtggcagtgaaaggacggtatacagagccaaattcagctccattact
gacacagacatttgcaatgccatgaaccacttaggagagcccaatcacaatgaagcacta
tcagtggatgcccgtcaggagctggatctgagaattggttgtgcgtttacaaggtttcaa
accaaatacttccaggggaaatatggcaatttagacagctcattgatctcctttgggccc
tgtcaaactccaacgctggggttttgtgtggagcggcatgataaaatccagtctttcaag
cctgaaacttattgggtgttgcaagccaaggttagtcatgaaaaagacagttgtctgact
ttggactgggatagagtgagagtctttgacagagagattgctcaaatgttcctaaacata
acaaaggcagcaaaggatgcaaaggtagaatctgtaagcagaaaggagaaggctaagcaa
agacctctggctctgaatactgttgaaatgttaagagttgccagtgctgctttgggaatg
ggaccacaacatgctatgcaaatagccgaacggctttatactcagggttatattagttac
cctcgaacagaaactacccattacccggaaaactttgacttgaagggctctttgcggcag
caggctaataatccttactgggccgaaacagtaaattcactactggctgaaggtattaac
agaccgagaaaaggccatgatgctggggaccatcctcctataacaccaatgagatctgcc
acagaagcagaactaggtggtgatggatggagactgtatgaatatattactaggcatttc
attgccactgtcagtgctgactgcaaattcctccagacaaccattgcttgcagcattgga
ccagaacgttttacctgtataggtaaaactgttatttcactaggttttacagagatcatg
ccttggcagagcatcccaccagaagagaatctgcccagctgtgagaaaggagatgtcttc
cctatcagtgaagtaaaactgttggagaaacaaaccaatcctcctgactacttgacagaa
gctgagctcatcactctgatggaaaagcatggaattggaacggatgccagcattccagtt
catatcaacaacatctgccagcgcaactatgtcactgtggagaatggccgcagactgaag
cctacaaacctgggcatcgttctggtccatggctactataaaatagatgctgagcttgtg
cttcccacaatccgcagtgcagtagagaaacagcttaatctaattgctcagggtaaagca
gattatcaccaggtcctggaacacaccctggatatcttcaaaagaaagtttcactatttt
gttgattcaatcgctggtatggatgaattgatggaagtgtctttttcaccactggctgcc
acaggcaaacccctttcccgctgtggaaaatgtcaccgtttcatgaaatatatccaggca
aagccaagccgtctacactgttcccactgtgatgagacctacagtcttcctcagaatggt
accatcaaactctacaaagagttacggtgccccttggatgattttgaattggtgctttgg
tcctcgggatcaagagggaagagctacccactgtgcccttactgttataaccacccccct
ttcagggacatgaaaaaaggaatgggttgcaatgagtgcacccaccccacctgccagcac
tctctgaacatgcttggaattggacagtgcgtggaatgtgagaatggagtgctggtgctt
gacccaatctctgggcccaaatggaagatggcctgcaacaaatgcaacgtggtagtgcat
ttctttgaaaatgcccacaaggtacgcgtgtcggcagagacctgtgagtcatgtgacgct
gcgctggtggatgtcgatttcaataaagccaagtctcccctccctggcaatgagacccag
cactctggctgtgtcttctgtgaccctgtgttccaggatctggttgaactgaagcatgca
gccatgaagcaccctatgcaccgtggagggcagggaaaaagacagggacggggacgagga
aagggcaggaggcccggaggaaggcccaatccaaggaaaccaagagacaaaatggctgct
ctggctgcgtattttgtgtaa
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