KEGG   Sceloporus undulatus (fence lizard): 121916705
Entry
121916705         CDS       T07740                                 
Symbol
POLR2E
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
sund  Sceloporus undulatus (fence lizard)
Pathway
sund03020  RNA polymerase
sund03420  Nucleotide excision repair
sund04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:sund00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121916705 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    121916705 (POLR2E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    121916705 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sund03021]
    121916705 (POLR2E)
   03400 DNA repair and recombination proteins [BR:sund03400]
    121916705 (POLR2E)
Transcription machinery [BR:sund03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     121916705 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     121916705 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     121916705 (POLR2E)
DNA repair and recombination proteins [BR:sund03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      121916705 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 121916705
NCBI-ProteinID: XP_042298004
LinkDB
Position
10:complement(15609901..15618653)
AA seq 212 aa
MDDEEETYRLWEDPEAIMQLCHDRGYLVTQGELDQKTLEGFKAQXGDKPREGRPRRTISL
CWWPTMXPPRSVFVFFPEEPKVGIXTIKMYCSGMQEEKSTTGPSLWLQQCMTLQPSRYQS
LVTWAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYXVENQLPRIQAGDP
VARYFGIKRGPVVKIIRPSETAGRYITYRLVQ
NT seq 639 nt   +upstreamnt  +downstreamnt
atggacgacgaggaagagacgtatcgtctgtgggaagatccggaagccatcatgcagctc
tgccatgatcgcggctatctagtgacccagggtgagttggaccaaaagacgctggagggg
ttcaaagcccagnttggtgacaagccccgtgaagggcggccccgacgcacgatctcactg
tgctggtggcccacaatgtgaccccccagatcagtgtttgtctttttcccagaggaacca
aaagttgggatanngactatcaagatgtactgcagcggaatgcaggaggagaaatccacc
accgggccctcattgtggttacaacagtgcatgactcttcagccaagcaggtatcaaagt
cttgttacatgggcacccaagtacatccttgaacaattccttcaacaggagctgctgatc
aacatcactgaacatgagcttgtacctgaacatgttgtcatgaccaaagaggaggtgacg
gaattactggcgcgatactgagtagagaaccagcttcctaggatacaagctggtgacccc
gtggcacgttacttcggaatcaagcgaggcccggtggtgaagataattcgtcccagcgag
acggctggccggtacatcacctacaggctggtgcagtag

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