Sceloporus undulatus (fence lizard): 121916708
Help
Entry
121916708 CDS
T07740
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03030
DNA replication
sund03410
Base excision repair
sund03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121916708 (POLE)
03410 Base excision repair
121916708 (POLE)
03420 Nucleotide excision repair
121916708 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sund03032
]
121916708 (POLE)
03400 DNA repair and recombination proteins [BR:
sund03400
]
121916708 (POLE)
Enzymes [BR:
sund01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121916708 (POLE)
DNA replication proteins [BR:
sund03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
121916708 (POLE)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
121916708 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Spidroin_N
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
121916708
NCBI-ProteinID:
XP_042298007
LinkDB
All DBs
Position
10:complement(185193..209082)
Genome browser
AA seq
2297 aa
AA seq
DB search
MAFRRGGGGRRRWGAEAPAEVGEGEAPPPPRGDDSSSLSAKKRLERSHWTDAIDAQFGFE
RVKEPAERTGWLINMHPTEVLDEDKRLVSAVDYYFIQEDGSRFKVALPYKPYFYIATQKD
CDREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVDDLVKVRKEIT
PAVKKNRERDQSVDAYTTMLASALAGSSLTSKEEEPSKKTADQMDNIVDMREYDVPYHIR
LSIDLKIHVAHWYNVRYRGSSFPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETD
QIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHV
QETKPTIMVTYNGDFFDWPFVEARAAAHGMNMQKEIGFQKDSQGEYKSSQCIHMDCLRWV
KRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQILATYSVSDAVATYYMYM
KYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDG
HVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHAIEEEEGIPLD
QVTNFQDVCNEIKIKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATC
AACDFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPSLFPEGAPRAFHELT
REEQAKYEKKRLADYCRKAYKKIHVTKVEERITTICQRENSFYVDTVRAFRDRRYEFKGL
HKVWKKKLAAAMEMGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEM
AGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVIKSTNAKKPKVTIS
YPGAMLNIMVKEGFTNDQYQELVDPAVLKYVCRSENSIFFEVDGPYLAMILPASKEEGKK
LKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGTTLEEVYASVAKVAD
YWLDVLYSKAANMPDSELFELISENRSMSRRLEDYGEQKSTSISTAKRLAEFLGDQMVKD
AGLSCRFIISKKPEGAPVTERAIPLAIFQAELSVRRHYLRKWLKSPSLQDFDIRTILDWD
YYIERLGSTIQKIITIPAALQQVKNPVPRVHHPDWLHKKLLEKNDVYKQKKISELFTSEG
KKQVYANLPQEDTPCTQVTDIEDFGVTKPLQPGVPVSSKRKRIPTAEESQQQSQNLELTQ
SWREILGPPPPIGTTKEERLVWLCFHKKKWELQARQRQERRKRRRLADGEVVLSGGLIRA
GPSKGLSNYLLRTARSILDMPWQIVQIAETHQQGLFKLWAVIGNDLHCLKLNIPRVFYVN
QRVPKPEEGTDYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINASLSAPDIEGVYET
QVPLLLRALICLGCVCMVNKHLVRHLTGREAETFDLEHLEMRSLAQFSYLEPGSIRHIYL
YHHSQGNKALFGLFIPSQRKASVFVLDTVRSNQMPNLTNMYSVEHNAMVEKVGQELLPPN
KHTFEVRAETDRKTVCRAIQRLLLAYKDERRGPTLIAVQSNWDLKRLASGMPVFEEFPLV
PVQVADDINYGVLDWQRHAARHMIRRYLNLDTCLSQAFDMSRYYHIPIGNLPDDVSTFGT
DLFFSRHLHRHNHLLWLSPTSRPDLGGKEADDSRLVMEFDEKVSVEINHPGCYSTVCVEL
DLQSLAVNTILQSHHVNDMEGASSMCISFDVIQQASLEDMVTGNQATNVPASYDEAALCS
NTFRILKSVVVGWVKEITQYHNVYADNQVIHFYRWLRSPTSLLYDPALHRMLHNMMKKLF
LQLVAEFKRLGSAVIYANFNRIILCTKKRNIGDALAYVEYITKSIHSKEIFHSLTISFSR
CWEFLLWMDPANYGGIKGKVPSQIHYGEETNSKKTVDVEGSEEEEEEEEEEEDKEEGTGE
DGVEELLENNWNIVQYLPQAASCQTYFLMIVSAYIVAVYHSMKEEMERNGPGSTPIKRRT
NSQVSQEPVGEKGAMSGMIAFSQEYVSNELTQSFFTITQKIQKKVSGSRRTTEPSEMFPA
LPGSYLMLNNPALEFVKSVCQVLSLDTNVTNQVSKLKRDLLRLIEVGEFSEEAQFQDPCR
SYILPEMICKNCNFCRDLDLCKDPVFSQDGSVLPNWACSNCQAQYDSDAIEMALMEALQK
KLMAFTLQDLVCLKCKGIKDTHMPVYCSCAGDFDLLLPTKTFLEQLKVFQSIAQHYNMSY
LLENIKWLLQMNPQLPL
NT seq
6894 nt
NT seq
+upstream
nt +downstream
nt
atggcgttccggagaggcggcggggggcgacggcgctggggagcggaggcccccgcggaa
gtaggggaaggggaggcgccgccgccgccgcgcggggatgacagctcttcactctccgca
aagaaacgcttggagcgcagccactggacagacgcgatcgatgcccagtttggctttgag
agggtgaaggaacccgctgagaggacaggctggctgatcaacatgcacccgacggaggtt
ttggatgaggataaacgcctggtcagtgctgtggattactatttcattcaggaggatggc
agtcgatttaaggtggcattgccctataagccgtacttctatattgcaacccaaaaggat
tgtgaccgagaagtgtcctcctttctttccaagaagttccaaggtaaaatagcaaagctg
gaaactgtacccaaagaagatctggacctgccaaatcacctggttgggttaaagcgcaac
tacatcaagctctctttcaacacagtggatgatctggtaaaggtacgcaaagaaatcaca
cctgctgtaaagaagaacagagaacgggaccaatctgtggacgcttacaccaccatgtta
gccagcgctcttgctgggagcagcctgaccagtaaggaagaggagccctccaagaagact
gcagaccagatggacaatatagtggacatgcgggaatatgatgtaccctatcatattcgc
ctgtctattgatctgaagatccatgtggctcactggtacaacgttcgctaccggggcagc
agctttcctcctgaaatcactcgccgagatgacctggtagaacggccagatcctgtcgtt
ctggcctttgacattgagaccaccaaactccctttgaaatttccggatgcagagacggat
cagatcatgatgatctcctacatgattgatggccagggttacttgatcaccaacagggag
atagtttcggaagacattgaagattttgagttcactcccaaaccagagtatgagggtccc
ttctgtgtttttaatgaaccagatgaggcccatcttatccagcggtggtttgagcatgtt
caggaaaccaagccaacaatcatggtgacttacaacggagacttctttgactggcccttt
gtggaagccagagctgctgctcacggaatgaatatgcagaaggagattgggttccagaag
gatagtcagggtgaatacaaatcatctcagtgtatccacatggattgtctcaggtgggtc
aaaagagacagctatcttccggtgggaagccacaacctgaaagcggcagccaaagcaaag
ctgggttatgaccctgtggagctagaccctgaagagatgtgccggatggctactgaagag
ccacagattctggccacctattcagtgtctgatgctgttgctacctattacatgtacatg
aaatacgtgcatcctttcatctttgccttgtgcaccatcatcccaatggagcctgatgaa
gtgctacgaaagggatcagggactctctgtgaggcgctgctcatggttcaggcctatcat
gccaacatcatcttccccaataaacaagagcaggagttcaataagcttaccgaggatggg
cacgtgctggactcagagacatacgttgggggccatgtggaagcactggagtcgggggtc
tttcgcagtgacatcccctgccgctttaggatgaatcctgctgcctttgacttcctcctg
cagcgtgtggagaagacactgcgtcatgccattgaggaggaggagggaataccactagat
caagtgaccaacttccaagatgtttgtaacgaaatcaagattaagctgaattccctaaag
gatgttcccaaccgaattgagtgtccactgatctaccatctggatgtgggggccatgtac
ccaaatattatcctgaccaataggttgcagccttcagcaatggtggatgaagctacatgt
gctgcctgtgactttaacaagccaggtgcgaactgtcaacggagaatgacttggcagtgg
agaggagaattcatgcctgcatcccgcagcgagtaccaccgcatccagcaacagctggag
tctgagaagttcccctctctcttcccggaaggggcgccccgggctttccatgagctgacc
cgagaggagcaagccaaatatgagaaaaagcgcttggcagattactgccgcaaggcctac
aagaagatccatgtgactaaggtggaggagcggatcaccaccatctgccagcgagaaaac
tccttctatgtggatactgtgcgggcctttcgggaccggcgctatgagttcaaggggctc
cacaaggtgtggaagaagaagctggctgcagccatggagatgggagatgcgtcggaagtg
aagcgttgcaagaacatggagattctgtatgattcgctgcagctggcacacaagtgcatc
ctcaactccttttatggatatgtcatgcgcaaaggagctcggtggtactccatggaaatg
gctggcattgtctgcttcacaggtgcaaacattatcacacaggccagggagctgatagag
cagattgggaggcccttggaactagacacagatggcatctggtgtgtgcttccaaacact
ttcccagaaaactttgtcatcaaatcaacaaatgccaagaagcccaaggtgacaatctcc
tatccaggtgcaatgttgaacatcatggtgaaggaagggtttacaaatgaccagtaccag
gagctggtggacccagccgtgctcaagtatgtttgccgctcagagaatagcatcttcttt
gaagtggatggaccatatctggctatgattctaccagcctccaaggaggagggcaagaag
ctgaagaaaaggtatgccgtgtttaatgaggatggctctttagctgaattgaaggggttt
gaagtgaagcggcgcggggagcttcagctggtgaagatctttcagtcatcagtgtttgag
gccttcctgaagggcaccactttggaagaggtctacgcttcggttgccaaagtagcagac
tactggcttgacgtgctttacagcaaggctgccaatatgcctgactcagagctttttgag
ctgatctctgagaaccgatccatgtcccgcagactggaggattatggggaacagaaatcc
acctctatcagcacagctaagcgtctggccgagttccttggggaccagatggtaaaggat
gcgggactgagctgccgatttatcatctctaagaagccagaaggagctccagtcactgag
agagccatcccactagccattttccaggctgagctttcagtacgcaggcactatctccgg
aaatggctgaagagcccctccctgcaggattttgacatccgaacgatcctggattgggac
tattacattgagagactgggtagcacaatccaaaaaattatcactattccagcagcactg
cagcaggtgaagaaccctgtgcctcgtgtccaccatcctgactggctgcacaagaagctc
ttggagaagaacgatgtgtacaagcagaagaaaatcagtgaactgttcacaagcgagggc
aagaagcaggtctatgctaacctaccccaagaggacaccccttgtacacaggtcacagat
atagaagattttggggtcaccaaacctctccagccaggagtccctgtgtcaagcaaacgt
aagcggattcccacagcagaagagagccagcagcagtcccagaatctggaactcacccag
tcctggagggagatcctgggcccaccaccacccattggcaccaccaaggaggagcgccta
gtctggctgtgcttccacaagaagaagtgggaacttcaggcccgtcagcgccaggagcgc
cgcaagaggcggaggttggctgatggcgaagtggtcctgagtgggggactgatccgtgcc
ggcccctctaaggggctcagcaattacttgctcaggactgcgcggagcatcctcgacatg
ccgtggcagatagtgcagattgccgagacccaccagcaaggcctctttaagctgtgggct
gtgattggaaatgacctgcattgtctcaagctgaacatcccccgagtcttctatgtcaac
cagcgtgtccccaaacctgaagagggcacggactataggaaggtgaacagaattcttcct
cgttccaacttagtctacaacctctacgaatattctgtgcctgaggatatgtaccaggag
cacatcaatgaaattaatgccagtctctctgccccagatattgagggggtgtatgaaacc
caggtgccattattgctgcgggctttgatctgcttgggctgcgtctgcatggttaacaag
catttggtgagacacctcaccggccgagaggctgagaccttcgacctcgaacacctagag
atgcgctctttggctcagttcagttacctggaaccaggcagcatccggcacatctacctt
tatcaccattcccaaggcaacaaggccctgtttggcctcttcatcccatctcagcgcaaa
gcatctgtctttgtacttgacacagtccggagtaaccagatgcccaacctcaccaacatg
tactcagtggagcacaatgcaatggtggagaaggtgggccaagagcttcttccacccaat
aagcacacctttgaagtacgagcagagacggaccgcaaaacagtctgcagggcaatccag
cgcctcctgctagcatacaaggatgagcgcagggggcccaccctcatcgctgtgcagtct
aactgggatttgaagaggctggccagtggcatgcctgtctttgaggagttcccgctggtt
cctgtccaggtagctgatgacatcaactatggtgtcctggactggcagcgccacgctgcc
cgacacatgatccgtcgctacctcaacttggacacatgcctgtctcaagcctttgacatg
agcaggtactaccacatccctatcgggaacctgcccgacgacgtctccacctttgggaca
gacctgttcttctctcgccacctccaccgccacaaccacctcctgtggctttcgcccacc
tcccgtcctgatctgggcggcaaggaggcagatgacagtcgcctggtcatggaatttgat
gagaaggtctctgttgagatcaatcacccaggctgctattccacagtgtgtgtagaactg
gatctccagagccttgctgtgaacaccatcttgcagtcccatcacgtcaatgacatggag
ggggcctccagcatgtgcatcagctttgacgtgattcagcaggcatcgctggaggacatg
gtcacagggaaccaggccaccaatgtccccgccagctacgatgaagcagccctttgctcc
aacactttcaggatcttgaaaagtgtggtggtgggctgggtgaaagagatcacgcagtac
cacaatgtctatgctgacaaccaggtgattcatttctaccgctggctgcgctccccaacc
tcactgctctatgatccagcattgcaccgcatgctacacaatatgatgaagaagctcttc
ctgcaactagtggcagagttcaaacgccttggctctgcagtgatttatgctaacttcaac
cgcatcatcctatgcaccaagaaacgcaacattggtgacgcccttgcctacgtggaatac
atcaccaaaagcatccactcgaaggaaatcttccactcgttgactatttccttctcacgc
tgctgggagttcttgctttggatggacccagccaattacggtgggatcaagggcaaagta
ccatcccagatccactacggggaggagacaaacagcaagaagacagtagatgtagaaggc
agtgaggaggaggaggaggaagaggaggaagaagaggacaaggaagaaggaacaggagaa
gatggtgtggaggagctgctggagaacaactggaacatagtgcaatacctaccccaggct
gcctcctgtcagacttacttcctcatgattgtgtctgcctacattgttgcagtctaccac
agcatgaaggaggaaatggagcgtaatggccctggaagcacacccatcaagagacgcaca
aatagccaggtctcccaggagcctgtgggggagaagggtgccatgtcaggcatgatcgca
ttctctcaggagtatgtctccaatgagctcacccagagcttcttcaccatcacccagaag
atccagaagaaagtgagtggctctaggcgcaccacagagccctcagaaatgttcccagcc
ctgcctggctcatacctgatgctcaacaatccagcactggagtttgtgaaatctgtctgc
caggtattgtctctggataccaatgtcaccaaccaggtgagcaagctgaagcgagacctg
cttcgcctcatcgaagtgggagaattctccgaagaggctcagtttcaggatccttgtcgc
tcctacatcctcccagagatgatctgcaagaactgtaacttctgcagagacctggatctc
tgcaaggacccggtcttctctcaggatggctcagtgctgcctaactgggcatgctccaat
tgccaggctcagtatgactcagacgctattgagatggccctgatggaagcccttcagaag
aagctgatggcctttacccttcaagatctggtgtgtctgaagtgcaaaggcatcaaggac
acccacatgcctgtgtactgcagctgcgctggagactttgacctcctcttgcccaccaag
accttcctggagcagctgaaggtcttccagagcattgcccagcactacaacatgtcctac
ctgttggagaacattaaatggctgctgcagatgaaccctcagctgcctttgtga
DBGET
integrated database retrieval system
