Sceloporus undulatus (fence lizard): 121916724
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Entry
121916724 CDS
T07740
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03013
Nucleocytoplasmic transport
sund03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121916724 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
121916724 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121916724 (THOC5)
03041 Spliceosome [BR:
sund03041
]
121916724 (THOC5)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121916724 (THOC5)
Spliceosome [BR:
sund03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121916724 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
121916724
NCBI-ProteinID:
XP_042298041
LinkDB
All DBs
Position
10:complement(15028168..15036298)
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AA seq
683 aa
AA seq
DB search
MSSESGKKRKPKVIRTDGGPQDGKRGRADADQDPCYYSEEAEVDLRDPSKDYELYKQTCQ
DLQRLMSEIQDLKSRGTKDSAAEIEDRRVQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSVEEFYAEAPPEISKAGITR
ADPHQQTLSRLDWELEQRKRLAEKYKESLANKEKILKEIEVKKEYLSNLQPRLNSIMQAS
LPVQEYLSMPFEQVHKQYETATHLPPPLYVLFVQASAYGQACDKKLAVAIEGNVEEAKAL
CKPPEDSQDDESDSDAEEEQNTKRRRPTLGVQLDDKRKEMLKRHPLTVAIALKCKDGSVL
HLTFYYLMNLNVMTVKAKVAAAAEMTAPISAGDLLSLDSLLSCLYPGDHGKRTPNPANQF
QFDKVGILSLSDYVMELGHPYVWVQKLGGLHFPKDQPQSPVTADNSLSASHMERTMKLLK
TRLESRMALHKQFASLEHGILPVSGECQSLFPAKIVSRLVKWSAVTYEDYLELPYTRDVV
DAGLAEDTHLYYVALIERGTAKLQAAVALNPGYCAIPPVFSLCLNWNGERTNGNDDNIRA
MESEVNVYYKELYGPKPGYQLLTNQLLRLCVVLDVYLETETHDNSVEGPKEFPQEKMCLR
LVRGPSRLKPFKYNYPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggagtccggcaagaagcgcaagccgaaggtcatccggacagacggaggcccc
caagatggcaagcgcggacgcgccgacgctgaccaggatccttgttattacagtgaggag
gccgaggtggacttgagggaccccagcaaagactatgagctctacaaacagacctgccag
gacctccagagactgatgtctgagatccaggacctcaagagcagaggcaccaaggacagc
gcggccgagatagaggaccgccgcgtccagagctgcgtccatttcatgaccctgaagaag
ctcaaccgtttggcgcacatccggctgaaaaaggggagggaccaaacccacgaggcgaag
cagaaagtggatgcttaccacctgcagctccagaaccttctttacgaagtcatgcacctc
cagaaggagatcaccaaatgcctggagttcaaatcgaagcacgaagagatcgagttagtg
agcgtggaggagttttacgcagaagcccctccggagatcagcaaggcgggaatcacgcgc
gccgaccctcaccagcagaccctttcgcggctcgactgggaactggagcagcgcaagcgc
ctggcagagaaatacaaagaaagccttgccaacaaagagaagattttaaaggagatagaa
gtgaagaaggaatacctcagcaacctccagcctcggctcaacagcatcatgcaggcttcg
cttccggtccaggagtacctctccatgcctttcgaacaggtccacaagcaatacgaaact
gccacgcacctcccgccacccctctacgtcctctttgtccaggccagcgcctacggccaa
gcctgcgataagaaactggcggtggcaatcgaaggcaacgtggaggaggccaaggcgctt
tgcaaacctccggaggactctcaagacgacgagagtgactcggacgccgaggaggagcag
aacacgaaacgccggcgcccaactttaggcgtccagctggacgacaagcgcaaggaaatg
ctcaagaggcacccactgactgtcgccatcgccctgaaatgcaaagatgggagtgtcctc
cacttgaccttctactacctgatgaacctcaacgtcatgacggtcaaggccaaggtggcg
gccgcggcggagatgacagcaccgatcagcgccggagacctcttgtccctcgactccctc
ctgagctgcttgtaccccggggaccacgggaagaggacccccaatccagccaaccagttc
cagttcgacaaagtcggcatcctgagcctcagcgactacgtgatggagctgggccacccc
tacgtctgggtccagaagttggggggcctccatttccctaaggaccagccccagagtcct
gtgacagcggacaactcgcttagtgccagccacatggagcggaccatgaagctgctgaag
acgcgcctggagtcgcgcatggccctccataagcagtttgcctccctcgagcatgggatc
ctgccggtgtcgggcgagtgccagagcctcttcccggccaaaatcgtgtcacgtctggtc
aagtggtcagcggtcacctacgaggattacttggagctgccctacactagagacgtggtc
gacgccggtttggcggaggacacccacctttattatgtggcgctgatagaaagagggacg
gctaagctccaggccgccgtggcattgaacccgggctactgcgccatcccccccgtcttc
agcctctgcctgaactggaatggggaaaggaccaatggcaacgacgacaacatccgggcc
atggagagcgaggtcaacgtctactacaaggaactctatgggcccaagccaggctaccag
ctgctgaccaaccagctcctgcgcctctgcgtcgtgctggacgtctacctggagacggag
acccacgacaacagcgtggaggggcccaaggagttcccacaggagaagatgtgcctccgc
ctggtcaggggtcccagccgcctgaaacccttcaagtacaactatccccagggtttcttc
agccatcgttga
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