Sceloporus undulatus (fence lizard): 121916845
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Entry
121916845 CDS
T07740
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sund03009
]
121916845 (DDX52)
Enzymes [BR:
sund01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121916845 (DDX52)
Ribosome biogenesis [BR:
sund03009
]
Eukaryotic type
90S particles
Helicases
121916845 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
UvrD-helicase
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
121916845
NCBI-ProteinID:
XP_042298292
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All DBs
Position
11:7449205..7456361
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AA seq
636 aa
AA seq
DB search
MVRAVRAGKEGGRRSVSMDSRELFRRLGTGAKFDVRRFRSDAQRFKVIRTKDKEAGAAEI
LEELDFFARKRPTGSLGGDGGGRNASEGEAIKSVTAKKTGAGQKRKEEEQATEGRKKKKK
ETAPVISAAENDGILWMSALEAKLGVPKKKEEKLLSAEKLRQASQQKMNHFRNKHKIYIQ
GTDLPDPIATFEQLGEEYEIHPKVMRNIEAAGFQTPTPIQMQAIPVMLHGRELLACAPTG
SGKTLAFSVPILAHLKQPRNKGFRALIISPTRELASQTHRELVKLSEGTGFRIHMIHKAA
AAAKKFGRKSAQKFDILVTTPNRLIYLLKQEPPAVDLSRVEWLVVDESDKLFEDGKTGFR
DQLATIFLACTSHVVKRAMFSATFAHDVEQWCKLNLDNLVSISIGARNAAAETVDQELLF
VGSETGKLLAMRDLVKKGFTPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQRD
GVVHSFRAGKIWVLICTALLARGIDFKGVNMVINFDFPSSAVEYIHRIGRTGRAGHSGKA
ITFFTEDDKPLLRSIASVIQRAGCPVPDYIQHFRKLQSKQKKKLIKKPLEREHILTSPEY
LKRKAKAKQLATQKKLKKNSKNARNSASQARIVPEK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggtccgcgcggtgcgtgctgggaaagaaggaggaaggagaagcgtgagcatggattcc
agggagctcttccggaggctggggaccggcgccaagttcgacgtgaggcgcttcaggagc
gacgcccagcgcttcaaggtgatcagaacgaaggacaaggaagccggagcagcggagatt
ctggaagagcttgattttttcgctcgcaaaaggccaaccggttctctgggcggcgatgga
ggaggaagaaacgcgtctgaaggcgaagctatcaaatccgtaaccgcaaagaaaacaggg
gcaggacagaagagaaaagaggaagagcaagcgactgaaggaaggaagaaaaagaagaaa
gaaacggctccggtgatttccgccgctgaaaacgatgggattttgtggatgtccgctctg
gaagcgaagctcggcgtccccaaaaagaaggaggagaagctgctctccgcagagaagctg
aggcaagccagtcagcaaaagatgaatcatttcaggaacaagcacaagatctacatccag
ggaacggatcttccggatcccattgcgacgttcgagcagctcggagaagaatacgaaatc
cacccaaaggtcatgcgcaatattgaagcggccggattccagaccccgacaccaattcag
atgcaagcgatccccgtcatgctccacggccgcgaacttttggcttgcgccccgaccggc
tcagggaagacgctggcttttagcgttcctattttggcgcacttgaaacaaccaaggaat
aaagggttccgggcgctcatcatctcgcccacgcgggaactggccagccagacacacaga
gagctggtcaagttgtcagaaggcaccgggttcaggatacacatgatccacaaagctgct
gcagctgcaaagaaattcggacggaagtcggctcaaaaattcgatattctggtgacgact
ccaaacagacttatctatcttctgaagcaagaacctccggcggttgatttgagcagggtc
gagtggctggtggtcgacgaatcggacaagctgtttgaagatgggaagacgggatttcgg
gaccagctggccaccatcttcttagcatgcacttcccacgtggtcaagcgagccatgttc
agcgccacgtttgcacatgacgtagagcagtggtgcaaactcaatctcgacaatctcgtc
tctatttctattggagcaagaaatgctgcggctgagacagtggaccaagagctcttgttt
gttggatcggagacaggaaaactgttagccatgagagacttagtgaagaagggcttcaca
cctcctgttttggttttcgtacagtccattgaacgggccaaagagctgttccacgagctc
atttacgaaggcatcaacgtggacgtcattcatgcggacaggacccaacaacagagagac
ggtgtcgtccacagtttcagagcgggaaagatttgggtcctcatctgcaccgctttgctg
gcgagagggatcgacttcaaaggagtgaacatggttatcaattttgactttccaagtagc
gctgtggaatatatccaccggatcggtcgcacagggagagcaggacactccggaaaagca
attactttcttcaccgaagatgacaagccattactgcgaagcatcgcgagcgtcatccag
agagctggctgccccgtccctgactatatacaacatttccggaagctgcaaagcaagcaa
aagaagaagctgatcaagaaaccgttggaaagggaacacattctgacctcaccagagtac
ttaaagaggaaagccaaggcaaaacagctggcaacccagaagaagctaaagaagaactcg
aagaacgccagaaacagcgcctctcaggcacggattgttccggaaaagtaa
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