Sceloporus undulatus (fence lizard): 121916923
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Entry
121916923 CDS
T07740
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sund03021
]
121916923 (SUPT6H)
03036 Chromosome and associated proteins [BR:
sund03036
]
121916923 (SUPT6H)
Transcription machinery [BR:
sund03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
121916923 (SUPT6H)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
121916923 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
FAST_1
Motif
Other DBs
NCBI-GeneID:
121916923
NCBI-ProteinID:
XP_042298418
LinkDB
All DBs
Position
11:complement(5983904..6007079)
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYDEEGEVVSKPTKKFTEDEDEEEEDDNPDDQDEQGNLKGFINDDD
DEEEEEEEEGSDSGDSEDDVGRKKRKRNFDDRLEDDDFDLIEENLGVKVKRQKFRRVRKM
SDDEDDEEEDLGKEEHEKEAIAEEIFQDGEGEEGGEATEGPVAAAEEDEEEEEDESDIDD
FIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEDEYDYE
PEETEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRVTDMPERFQLRSI
PVKNAEDDELEEEADWIYRNAFAMPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKEAL
NFMRNQHFEVPFIAFYRKEYVEPELHISDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQAY
QYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAK
ANRKKQKRVREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQAAGLDGLAKKFGLT
PEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPNPEAVLEGACYMVALQIAREPLV
RQVLRQTFQERAKINVSPTKKGKKDIDEGHYAYTFKYLKNKPVKELRDDQFLKICLAKDE
GLLAIDICIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTLAIERALNQFLY
PQMAKELKNKLLVEAKEFVIKICSRKLSNWLKVAPYRPDQQVEEDDDFMDENQGKGIRVL
GIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFLLS
KKPHVVTIAGENRDAQMLMEDVKRIAHELDQGQQLSSIGVELVDNELATLYMNSKKSETE
FRDYPPVLRQAVSLARRIQDPLVEFAQVCSSDEDILCLKLHPLQEHVVKEDLLNALYCEF
INQVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCH
MGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAED
ANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRNPYR
SPNSEEVFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQ
QDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVSGFVPTKFISDKVVKRPEERVKVGMT
VHCRIMKIDIEKFSADLTCRTTDLMDKNNEWKLPKDTYYDFDAEAADHKQEEELKRKQQR
TTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDNIYQHVD
VREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLSHKYYQDCNGGDRKK
LEELLIKTKKEKPTFIPYFICACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRNHIFP
TVNGLFRWFKDHYQDPVPGVTPSSSSRTRTPASLNATPANINLADLTRAVNALPQNMTSQ
MFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLLTPSYS
YTTPSQPITTPQYHQLQTNTTPQSTQSQPPSQPSSSSSQRQPQPKSSTHTAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSMAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtggagagtgaagccgaggaatctgaggaggagtacgatgaagaagga
gaagttgtttccaagccaaccaagaaatttacggaggatgaagacgaggaggaggaggat
gacaacccggacgaccaggatgagcaaggcaacttgaaagggtttattaatgatgacgac
gatgaggaagaagaggaggaagaagaaggcagcgattcaggggactcggaggacgacgtc
ggtcgtaaaaagaggaaacgcaatttcgatgaccgcctcgaggatgatgactttgacctc
attgaggagaacttgggcgtcaaagttaaacggcaaaagttcaggcgagtacggaagatg
tcggacgatgaggacgatgaagaggaggatttggggaaggaggagcatgagaaggaggcc
attgccgaagagatcttccaggacggggaaggcgaggaggggggtgaagctacggaaggc
cccgttgctgccgctgaggaagatgaggaggaggaggaagatgagtctgacatcgatgac
ttcattgtagatgacgatgggcagcccctgaagaagcccaaatggaggaagaaactgcct
ggctacacagatgcagccctgcaagaagctcaggagatttttggtgtagactttgactat
gatgagtttgagaaatacaatgaatacgacgaggagatggaggacgagtatgactacgag
cctgaagagaccgaaggggagatccgggtccgacccaagaagaccaccaagaagcgggtc
agccggcgcagcatttttgagatgtatgagcccagtgagctggagagcagccacttgacg
gatcaggacaacgagatccgggtgaccgacatgcctgaaaggttccagttgcgctctatc
cctgtgaagaatgctgaggatgacgagttggaagaggaggccgactggatctaccggaac
gcttttgccatgcccaccatctccctgcaggagagttcggactacttggaccgaggccag
gccagcagcagcttcagccgcaagggccccagcaccatccagaagatcaaggaagccctg
aactttatgaggaaccaacactttgaggttcccttcatcgccttctacaggaaggaatat
gtggagcccgagctgcatatcagtgacctgtggcgagtttggcagtgggatgaaaagtgg
acccagctgaagatccgtaagcagaacctgacccgcctgtttgagaagatgcaggcctac
cagtatgagcagatctcagctgatccagacaagcctctggctgatggaataagagccctg
gacacaactgacatggagaggctgaaggatgtccagtccatggatgagttaaaggacgtc
tacaaccacttcctcctctactacggccgagacattcccaagatgcagaatgcagcgaaa
gccaaccgcaagaagcagaagcgagtccgggaggatggcgaggaggaggaaggtgaggga
gaggatgctgaagatgatgagcagaaggggccggagctgaagcaggcctcccgtcgggac
atgtacaccatctgccaggcggctggcctagacggcctggcaaagaagtttgggctgacg
cctgagcagtttggtgagaacctgcgggacagttatcagcgccacgagacggagcaattc
ccagcagagcccttggagctggcaaaggattatgtctgcagccagttccccaaccctgag
gccgttctggaaggggcctgctacatggtggccctgcagattgcccgggagcccttggtc
cggcaggtgctgcgccagaccttccaggagagggccaagatcaacgtctccccaaccaag
aagggcaaaaaggatatcgatgagggccattatgcctacaccttcaagtacctgaagaac
aaaccagtcaaggagctgcgggatgaccagttcttgaagatatgcctggccaaagacgag
ggcctccttgccattgacatctgcatcgacatgaagggcgttgagggctacggcagtgac
cagacctatttcgaagagatcaagcagttctactaccgcgatgagttcagccaccaggtg
caggagtggaaccggcagcgcaccttggccatcgaaagggccctcaaccagttcctctac
ccgcagatggccaaggagctgaagaacaagctgctggtggaagccaaggagtttgtcatc
aagatctgcagccggaagctgtccaattggctcaaagtggctccctatcgcccggaccag
caggtggaagaagacgatgacttcatggatgaaaaccaagggaaaggcatccgtgtgctg
ggcatcgccttctcctctgccagagaccaccctgtcttttgtgcccttgtgaacggggaa
ggggaggtgacggatttcctgcgcctgcctcacttcaccaagcggaggaacgcctggcgg
gaagaagaaagggagaagaaggctcaggatattgaaacactgaagaagttcctactcagc
aagaaaccccacgtggtcacgattgctggagagaacagggatgcccagatgctgatggag
gatgtgaagcgcatcgcccacgaactggaccaagggcaacagctttcctccatcggggtg
gaactggtggacaatgaactggccacactttacatgaacagcaagaaatccgagactgag
ttccgggactacccgccagtcctgcgccaggccgtctccctggctcgccgcatccaggac
ccgctggtcgagtttgcccaggtctgcagctcagatgaggacatcctatgtctcaagctc
caccctttacaggagcatgtggtgaaagaggacctgctcaatgccctgtactgcgagttc
atcaaccaggtgaatgaggtgggggtggacgtcaaccgggccattgcccacccacacagc
caggcccttctgcagtacgtctgtggcctcggacctcgaaagggcacccacctgctcaag
atcctgaaacagaacaatacacggctggagaaccggacccaactggtcaccatgtgccac
atggggcccaaagtcttcatcaactgtgccggtttcatcaagatagacacagcctcattg
ggcgacagcacggattcctacattgaggtccttgacggatcacgggtccaccctgagacc
tatgaatgggcccgcaagatggccgttgacgccctggagtacgatgagtcagccgaggat
gccaatccggccggtgccctggaagagatcctggaaaacccagagcgtctgaaggacctg
gatctcgatgcctttgccgaagagctggagagacagggctacggtgacaaacacatcact
ctgtatgacatccgggccgagctgagctgccgctacaaggacctgcggaacccctaccgc
tctcccaactccgaagaagtcttcaacatgctgaccaaagaaacaccagagactttctac
ataggtaaactgatcatctgcaacgtgacaggaatagcccaccggcggccgcaaggggag
agctatgaccaagccatccggaatgacgagaccggcttgtggcagtgccccttctgccag
caagacaacttcccagaactgagcgaggtctggaaccactttgacagcggctcctgtccc
ggccaggccattggggtgaagacgcgcttggacaatggggtgtcaggctttgtccccacc
aaattcatcagcgacaaagtggtcaagcgtccagaggaaagggtcaaagtggggatgact
gtccactgccggatcatgaagatagacattgagaaatttagtgccgatttgacctgccga
acaacagacttaatggacaagaacaatgagtggaagctgccaaaggacacctactacgac
tttgacgccgaggccgctgaccacaagcaggaggaagagctgaagcggaaacagcagcga
acgacgtacatcaagcgggtgattgcccacccgtccttccacaacatcaacttcaagcag
gcggagaagatgatggagaccatggaccaaggggacgtcatcatccgccccagcagcaaa
ggggagaaccacctgacggtcacctggaaggtctccgacaacatctaccagcatgtggac
gtgcgggaggaaggcaaggagaacgccttcagcctgggctccaccctctggatcaacaca
gaggagtttgaggacctggatgagatcgtggcccgctacgtccagcccatggcgtctttt
gcaagagacctcctcagccacaaatactaccaggattgcaacgggggagacaggaagaaa
ctggaggagctcctgatcaaaaccaagaaggagaagcccaccttcatcccctacttcatt
tgcgcctgcaaagacctccctggcaaatttctgctgggctaccagccacgcggcaaacca
agaattgagtacgtcacagttacacctgaagggttccggtaccggaatcacatcttcccc
acagtcaatgggcttttccggtggttcaaagatcactaccaggaccctgtgccaggagtc
acccccagcagcagcagccggactcgaacgcccgcctctctcaacgcaactccggctaac
attaacctggcagatttgacccgggctgtcaatgccctcccgcagaacatgacctcccag
atgttcagtgccatcgctgccgtgacaggccaggggcagaaccccaacgccacccctgcc
caatgggcctccagtcagtacggctacgggggaagcggtggtggaagcagtgcttaccat
gtcttcacaactcctgctcagcagccagtggctacccctctcttgactcccagctactcc
tacaccacccccagccagcccatcacgacgccccagtaccaccagctacagaccaatacc
accccccagtccacccagtcccagccgccgtcccagccttcctccagttccagtcaaagg
cagccacaacccaaatccagcacccacaccgccatcgactggggcaagatggccgaacag
tggctccaggagaaggaggctgagcgccggaagcagaagcagcggctgacccctcgccct
tctcccagtcccatgatcgagagcacccccatgtccatggctggagatgccaccccgctt
ctggatgagatggaccggtag
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integrated database retrieval system
