Sceloporus undulatus (fence lizard): 121916925
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Entry
121916925 CDS
T07740
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM50-like
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sund04121
]
121916925
Ubiquitin system [BR:
sund04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121916925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
Trimer_CC
TRIM_CC
PUMA_CC
zf-Nse
Prok-RING_4
zf-RING_6
DUF16
Interferon
Lebercilin
Motif
Other DBs
NCBI-GeneID:
121916925
NCBI-ProteinID:
XP_042298422
LinkDB
All DBs
Position
11:4962661..4968124
Genome browser
AA seq
512 aa
AA seq
DB search
MARKMSIDQLEDQLLCPICLEVFREPLMLQCGHSYCKPCVVSLSGGPGEALLCPVCRKAV
DCTSSPPNVSLARVIEALRGAGEGCGASGPEACEESCPDHRNPLSLFCEDDRAVICGLCG
TIGTHRHHKVTPVSSVYSRMKEELSVLMTGVQQQQRDLDEHVSRLMNNKTRIANESDVFK
WVIRKQFQELHRYIDEEKARFLGQIERQVAGLVASIQVQAEQAADALRELKELEDSLQSL
NNESQLDFIRKHGSLPSRSELPHQHPAEGGTFTAISFKPGFHQDDVQMMVWKRLLRRVLP
APETLKLDPESAHPMLELSKGNTVVRCGLLSQRRNSHPERFDYSTCVLASKGFSWGQHYW
EVIVGGKSHWRLGVVKATASRKGKLGKSPEQGAWLIGLKEGKVYEAFASPRVALPLTSRP
RRVGVFLHYERGEVAFFNADSPNELLPIYAFQAEFQGKLYPLLDVCWHERGTNALPMILP
TQAMLQAQGDNSGAEDGSGGDRSSDPEQPTKL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaagatgagcatagaccagctggaggaccagctcctctgccccatctgcttg
gaggtcttccgggaacccctgatgctccagtgcgggcactcctactgcaagccctgtgtg
gtctccctctcgggggggcccggagaggcccttctctgccctgtctgccgcaaggctgtc
gactgcaccagctccccacccaacgtcagcctggcccgcgtcattgaggccctgcgtggc
gcgggggaaggctgtggcgctagtggtcccgaggcctgtgaagagtcctgccccgaccac
cgcaaccccctcagcctcttctgcgaagacgaccgggccgtgatctgcgggctctgcggc
accatcggcacccaccggcaccacaaggtcacgcccgtctccagcgtctacagccggatg
aaggaggagctgtctgtcctgatgactggggtgcagcagcagcagagggacctggatgag
catgtcagccggctgatgaacaacaagacgcgcattgcgaacgagtcggacgtcttcaag
tgggtgatccggaagcagttccaggagctgcacaggtacatcgacgaggagaaggcccgg
ttcctggggcagatcgagaggcaggtggccggcctggtggcctccatccaggtccaggca
gagcaggcagcggacgccctccgggagctgaaggagttggaggactcactgcagagcctc
aacaacgaaagccaactggacttcatccggaaacatggctccctcccttccaggtccgaa
ctgccccatcagcacccggccgaagggggcaccttcaccgccatctcctttaagcccggc
ttccaccaagacgacgtccagatgatggtgtggaagcggctgctccgcagggtcctccca
gcgccagagacgctgaagctggacccggagagcgcccacccaatgctggagctctccaag
ggcaacacggtggtccggtgcggcctcctctcccagcggcgcaacagccacccggagcgc
tttgactacagcacctgcgtcctggccagcaagggcttctcctgggggcagcactactgg
gaggtcatagtggggggcaagagccactggcgcctgggggtggtcaaggccaccgccagc
cgcaagggcaagctgggcaagagccccgaacaaggggcctggctcattggcctcaaggag
ggcaaggtctacgaagccttcgccagcccccgggtggccctgcccctgacgtccaggccc
cgccgcgtgggggtcttcctccactacgaacggggggaggtggccttcttcaacgccgac
agccccaatgagctcctcccgatctacgccttccaggctgagttccaggggaagctctac
ccgctgctggatgtctgctggcacgagaggggcaccaacgccctgcccatgatcctgccc
acacaagccatgctgcaagcccaaggtgacaacagcggtgccgaggacggcagcggcggc
gaccgcagcagcgaccctgagcagcccaccaagttgtag
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integrated database retrieval system
