Sceloporus undulatus (fence lizard): 121916950
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Entry
121916950 CDS
T07740
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121916950 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sund04131
]
121916950 (RABGEF1)
Membrane trafficking [BR:
sund04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121916950 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
121916950 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
121916950
NCBI-ProteinID:
XP_042298464
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All DBs
Position
11:4314939..4329434
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AA seq
497 aa
AA seq
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MSLKSERRGIHVDQSELLCKKGCGYYGNIAWQGYCSKCWREEYQKARQKQIQEDWELAER
LQREEEEAYASTQHPPGAQSLTFTKFEEKKTNEKSRKVTTVKKFFGASRPGAKKALVGRR
RDAPEAKAPSPSISRQVSIETDRVSKEFIEFLKPYHKAGQEIYKQCKLFLETMHHKRELS
IEEQSEYAQDFYQNVAEKLQTRWKVPPERAEKAMDQIEKYLMTRLYKYVFCPETTEDEKK
DLAVQRRIRALHWVTPQMLCVPVNEEIPEVSDVVVKAITDIIEMDSKRVPRDKLACITSC
SKHIFNAIRTTKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMSGEDGY
YFTNLCCAVAFIEKLDAQSLNLSQEDFNRYMSGQSSPKKPELENWPADVCPGVQQMHHNL
DLLSQLNARQERIVSGARKLERDLIDWTEGVTKEVQEIVEKFPLEIKAPNPALAAIDSEN
VENDKLPPPLQPQVYAG
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaagtcggagcgccgcggcatccatgtggaccagtcggagctgctgtgcaag
aagggatgcgggtattatggcaacatcgcctggcagggctattgctccaaatgttggcgg
gaggaataccaaaaggcccggcagaagcagatccaggaagactgggagctggctgagagg
ctccagcgcgaggaggaagaggcctatgccagcacccagcacccgcctggggcccagtcg
ctcaccttcaccaagttcgaggagaagaagacgaacgagaagtcgcgcaaagtgaccact
gtcaagaaattctttggggcttcccggccgggagcaaagaaagcgctggttggcaggcgg
agagatgctccggaagccaaggctcccagtccttccatcagccggcaggtcagtatcgag
acggaccgcgtctccaaggagttcattgagttcctgaagccttaccacaaagccggccaa
gagatctacaagcagtgcaagctgttcttggagaccatgcaccacaagcgggagctgagc
attgaggaacagtctgagtacgcccaggacttctaccaaaatgtggctgagaagctccag
acgcgctggaaagtgcctcccgagagagcagagaaagcgatggaccagattgagaagtac
ctcatgacccggctgtacaagtatgttttctgcccagaaaccaccgaggatgagaagaaa
gacctggccgtccagaggaggatcagggctttgcattgggtgaccccacaaatgctgtgc
gtccctgtcaacgaagagatcccggaggtttctgacgtcgtggtgaaagccatcacagac
atcattgagatggactccaagcgcgtcccgcgggacaagctggcctgcatcaccagctgc
agcaagcacatcttcaacgccatccggaccaccaagaatgagccagcctcggccgacgac
tttctccccaccttgatctacattgtcctaaagggcaaccctccccggctccagtccaac
atccagtacattacccgcttttgcaatcccagcaggctcatgtctggggaggatgggtat
tacttcacaaacctgtgctgcgctgtcgccttcattgaaaagctggacgctcagtccctg
aacctgagccaggaggacttcaaccgctacatgtcgggccagagctctcccaagaagccg
gagctggagaactggccggccgacgtctgcccgggggtccagcagatgcaccacaacctc
gacctcctctcgcagctcaacgcgaggcaggagaggattgtgagcggggccaggaagctg
gagagggacctcattgactggaccgagggggtcaccaaggaggtccaggagatcgtggag
aagttccccttggagatcaaggcccccaacccggccttggccgccattgactccgaaaac
gtggagaatgacaaactgccgcctcccttgcagcctcaggtttatgccggctga
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