Sceloporus undulatus (fence lizard): 121917100
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Entry
121917100 CDS
T07740
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1 isoform X1
KO
K24318
scavenger receptor class F member 1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121917100 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sund04131
]
121917100 (SCARF1)
Membrane trafficking [BR:
sund04131
]
Endocytosis
Phagocytosis
Scavenger receptors
121917100 (SCARF1)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121917100
NCBI-ProteinID:
XP_042298701
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Position
11:complement(5538001..5545105)
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AA seq
955 aa
AA seq
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MGGTSASPAASLQSFPAAQDGSKRAGNAQWRSARDPTPATRTRSVFAPGSAAAGLASLGP
TVRDDALTNTGVLTAKRAASVSPMESATHPAESATVPPAGGDPSAGSPVSVAPMDTATRL
LGPAAVTQDGGPPIAADRAPASWGAPAATQPPAAAIAFGAGGAGHVPRAATAMAPPVPRS
PAAATARKGSGGRPASTGAPAPPTAAVLPRMGGAPATLATGDRAARICAQQGPSGCSVHI
AVATASPVPAPRWMAPARPVPPAGMGLTAKSRAPRDAMGRTAACLAPAAVEGRLATPRPE
SAKTAKQASWGPGGRCMCPPCKGWGYRHAGPVSGLSVPQGWGQTGRNGNAGAGLAAAAGP
SLLWGSGPTCSHLPLSFPTGVSCPVRPAFSGRAASCPASSASMGAVIRCPGRVCARMGSG
VPAATRAAWKASMAPTALSGARGARGIHATPSQGSASGVSLSLLSPLFLAPELVVLLGQG
SGPAFQWDVRGGYAWPQAGGGALFLGSQRPSLLLPEAHHTGALVAMILAPLLSLLLCLGC
WGCCCRPEPQDPRDRAAAMAAAGEGDPMLQVKHQVLGSLRSSLPCFSLGGHKLPRVTVSH
HDTEVPFTPSFIEPPSTVWPSDSSWDSEDGDGDEEAPLPAGGDATELQPGFPPEEEGESA
LNPEPFGIPRTSSLAKAKRPSVSFAQGTRFGPQSLQGSTEPLGATRKPRGAWGRPTPESE
EGSQPPPGSQEAGAPLVEDLRTGGCCYENVEAAGSQGEGGCPEPPTSGTPRGVHKARLAG
SRHVARRVEALEAASKTPGTPPGLTTIYVTVGKVGVGEGRGESGPGPVQTILKRLGSLQR
SRAPPGEDPRPRRALEGFQKPPRRALGAEKGAQRLPGPEKEEEAAQESGTRGPGAGEGQV
EAEGPWPLGGEGDGREGVGSPGRPERGSGGAAKAEAKEGEGEPKYENVPGWSGGF
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcacgtctgccagtccagcagccagcctccagtcctttcctgctgcccaggat
ggaagcaagagggccgggaatgcccagtggcgctctgcacgggacccgacgcctgccacc
aggacgaggtctgtgttcgccccggggtctgccgctgccggcctggcttctttggggcca
actgtacgggacgatgccctgaccaatactggggtcctgactgcaaagagagctgcctct
gtttccccaatggaaagtgcaacccatccagcggagagtgctactgtgcccccagctggt
ggggacccctctgccgggagtcctgtctctgtggcccccatggacactgccacccgctta
ctggggcctgccgctgtgacccaggatggtgggcccccgattgccgccgaccgtgcccct
gcttcctggggggctcccgctgcgacccaaccaccggccgctgccattgccttcggggct
ggtggggccggacatgtgcctcgcgctgctactgcaatggctccccctgtgcccaggagt
ccggccgctgccactgccaggaagggctctggggggcggcctgccagcaccggtgcccct
gcaccccccacggcagctgtgctgcccaggatgggcggtgcacctgccaccctggctacc
ggggacagagctgctcggatctgtgcccagcagggaccttcgggctgcagtgtgcacata
gctgtggccactgcaagcccggtgcctgctccccgctggatggctcctgctcggcctgtg
cccccggctggaatgggactcactgcaaagagtcgtgccccccgggacgccatggggaga
actgcagcctgtcttgcccccgctgccgtcgaggggaggcttgccaccccgagaccggag
agtgccaaaactgcgaagcaggcctcatgggggccaggtgggagatgcatgtgcccccct
tgcaaaggttgggggtaccgtcatgcaggtcctgtcagtggcctgtctgttcctcaagga
tgggggcagacggggaggaacggaaatgctggggctggtctggcagcagcagcagggcct
tctttgctatggggcagtggccccacatgttctcacctccctctttccttccccacaggt
gtcagctgccctgtccggccggccttttcggggagggctgcctcttgtcctgcctcctct
gcttcaatgggagctgtgatccggtgtccggggcgtgtgtgtgccaggatgggttctggg
gtgccagctgcaaccagagctgcttggaaggcttccatggccccaactgctctgtcaggt
gccaggggtgccaggggtatccatgccaccccatctcaggggagtgcctctggagtaagt
ctctctctcctttctcccctctttctggcaccagagttggtagtgctgttgggccaggga
tcgggccctgccttccagtgggacgtgagggggggctatgcctggccccaggcaggtgga
ggggcgttgttccttggctcccagcgcccttctcttctcctcccagaggcccaccacaca
ggagccctcgtggccatgatcctggctccactgctctccctcctgctctgcctcggctgc
tggggctgctgttgccggccagaaccccaggaccccagagacagggcagcagcaatggcg
gcggcaggagaaggagacccaatgctgcaggtgaagcaccaggttctgggcagcctccgc
tcctccttgccctgcttctctctggggggccacaagctcccacgtgtgacagtctcccac
cacgacacagaggtccctttcacccccagcttcattgagcccccttccaccgtctggccc
tctgactcctcctgggactccgaagatggtgatggtgatgaagaggccccgcttccggcc
ggcggagatgccactgagctccagcccggatttcctccagaggaggagggggagtctgcc
ttgaaccctgagcccttcggcatccctcgcacttccagcctcgctaaggccaagcggccc
tcagtctccttcgcgcaagggacccggtttggccctcagagtcttcagggctccacagaa
ccccttggagccactcggaagcccaggggcgcctgggggcgacccaccccagagtccgaa
gaggggtcgcagccaccccctgggtcccaagaggcaggggctcctctggtggaggacctg
aggactggaggctgctgctatgagaacgtggaggctgctggatcccagggggagggaggc
tgccctgagccccccacgtccgggactcccaggggggttcacaaggcccggctggctggc
tcccggcacgtggcccggcgggtagaagccctggaggccgcctctaagacccctgggaca
ccgcctggcctcaccaccatctatgtgacagtgggcaaagtgggagtgggtgagggccgg
ggcgagagtgggccaggccccgtccagaccatcctgaagaggctgggcagcctccagagg
tccagggcgccccccggggaagacccccggccaaggagggccctcgaggggttccagaag
ccgcctcgaagggccttgggggcagagaagggtgcccagaggctgccaggcccagagaag
gaggaggaagcagcccaggagagtggcacaagggggcctggcgctggagagggacaggta
gaggccgagggtccctggcccctgggaggggagggtgatggtagggagggagtgggcagc
cccggccggccggagagagggtcaggaggggcggccaaagcggaggccaaggagggagaa
ggggagcccaagtacgagaacgttcctggctggtctgggggcttctaa
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