Sceloporus undulatus (fence lizard): 121917128
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Entry
121917128 CDS
T07740
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121917128
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sund04040
]
121917128
Ion channels [BR:
sund04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121917128
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ion_trans
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
121917128
NCBI-ProteinID:
XP_042298776
LinkDB
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Position
11:complement(7050139..7063090)
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AA seq
844 aa
AA seq
DB search
MSGILGKMRKLGSSDLEESEGVADDHMDGEDSAAGTPNNSTRATKHGIFARRARFGIGDG
DKDMAPMDSFYQMDHLASNPIIKFSLSLERGKCGNHCSNLLSTASLGLRAEKAFKIYNRR
RVFDAVAQGDPSDLDDLLIYLVETTKNLTDDEFKEPDTGKTCLLKAMLNLHNGWNDTIPV
LLEIAEKTDNLKEFVNAEYTDSYYKGQTALHIAIERRNYYLVELLVKNGADVHAQAHGEF
FQKIKGRPGFYFGELPLSLAACTNQLNIAKYLLENPHHPADIATQDSMGNTVLHALVEIA
DNTEDNTKFVTNVYNEILILGARINPTLKLEEITNHSGLTPLTLAAKTGKIQVFAYILRR
EMKVPECRHLSRKFTEWAYGPVHSSLYDLSSIDTCEKNSVLEIIAYSSETPNRHEMLLVE
PLNQLLQDKWDGFVKHLFYFNFIVYAAHILILTVAAYFRPTRKDGTPPFAFRHKTSEYLR
VTGEILSILGGVYFFFRGIKYFKQRCSSFKAVFTESYSELLFFLHSVLILSSAVLYFSKQ
ELYVVFMVFALALGWINLLFYTRGFQQMGIYSVMLEKMMLRDLLRFIVVFLLFHFGFSTA
VVTLIEEDDEKPEGLNHSSPLCLCQGKRRPSYNNFYSTCLELFKFTIGMGDLEFTENYRF
KSVFVTLLIIYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILNIENSYWNC
IINPFRSGKQVLVGTTPDGKDDYRWCFRVDEVNWSTWNTNLGIINEDPGGCNEDLKRNLS
FSLKPGRVSGKNWRTLVPILRDGKREGSLKPISEDYADSEVHVVRKKSLPKLVSFCFSSL
PLRF
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcatcctgggcaaaatgcggaaactgggcagctcggatctggaggaatcggaa
ggcgtggcggatgaccacatggacggagaggactcggccgccggcaccccaaacaacagc
acgagggccacgaagcatggcatctttgccaggcgggcgcggtttgggatcggggatggc
gacaaagacatggcccccatggactccttctaccagatggaccacctggcctccaacccc
atcattaagttcagcctcagtttggagagagggaaatgcgggaaccactgttccaatctc
ctgtccacggcttcccttggtttgcgggccgagaaagcgttcaagatctacaaccgaagg
cgcgtctttgatgcggtggcgcagggggatccgagcgacttggatgacctcttgatttac
cttgtggagacgacgaaaaatttgacagacgatgaattcaaagaaccagatactgggaaa
acatgtttgctgaaagctatgctgaacctccataatggctggaatgacaccatcccagtc
ttgttggagatcgccgagaagacagacaacctgaaggagtttgtgaacgccgagtacaca
gacagctactacaagggtcagactgccttgcacattgccatcgagagacggaactactac
ttggtggaactcctggtcaagaacggggcggacgtccatgcccaagcccatggggaattc
ttccagaagataaaagggagacctggattttattttggtgagcttcctctctctctggct
gcctgcactaaccagctcaacattgccaaatacctcctggagaacccccaccatccggcc
gacattgcgacccaggactccatgggcaacaccgttctccacgccttggtggagatcgct
gacaacaccgaggacaacaccaagttcgtcacaaacgtgtacaacgaaatcctcattctc
ggagccaggatcaaccctaccctcaagctggaagagatcactaaccacagtgggttgacg
ccactgacgctggcagccaagaccgggaagatacaggtcttcgcctatatcctccgacgg
gagatgaaggtgcccgaatgtcgccacctctctcgcaagttcaccgaatgggcttatggg
cccgtccactcgtcgctgtacgacctttccagtatcgatacgtgtgagaaaaactccgtt
ctggagatcatcgcttacagcagtgagacgccgaatcgtcacgaaatgcttctggtggag
cctctcaaccagctcctccaggacaagtgggatggctttgtgaaacaccttttttatttc
aacttcatcgtttacgcggcccatattctcatcctcactgtcgcggcctacttcagaccg
acgcgcaaagatgggacgcccccctttgcctttcgccacaagaccagtgaatatttgcga
gtcacgggggaaatcctgagcatcctgggaggcgtctatttcttttttagagggatcaag
tatttcaagcagagatgctcatccttcaaggcagtctttacggagagctacagcgaactt
cttttcttcctccactcggtgttgatcctcagttcggcggtgctttatttcagcaaacag
gagctctacgtggtcttcatggtctttgccttggcgctgggctggatcaacctgctcttt
tacacccgcgggttccagcagatgggcatctactctgtcatgctggagaagatgatgctg
agagatctcttgcgcttcattgtggtcttcctgctgttccattttggcttttcgacagcg
gtggtgaccctaatcgaggaagacgacgagaagccggaagggctgaaccacagcagcccc
ctctgcctctgccagggcaagcgccgcccttcctacaacaacttctactccacctgcctg
gagctgttcaagttcaccattgggatgggcgacctggagttcacggagaactaccgcttc
aagtccgtctttgtcaccctgctgatcatctacgtcatcctcacctacatcctcctcctc
aacatgctcatcgccctgatgggagaaaccgtcaacaagatcgcccaggaaagcaaaagc
atctggaagctccagagagccatcaccatcctgaacatcgagaacagctactggaattgc
atcatcaaccctttccgatccgggaagcaggttttggttgggacgaccccggatggcaag
gatgactaccgctggtgttttagggtcgacgaggtgaactggtccacatggaacaccaac
ctgggcatcatcaatgaagaccccgggggctgcaatgaagatctgaaacgaaacctgagc
ttttctctcaaaccaggccgagtttcagggaagaactggaggacgctggtgccgatcctg
agagacggaaaacgagaggggtcactgaaacccatttcggaagactacgcagattcagaa
gtgcatgtagtccggaagaaatcgctccccaagttggtctccttttgtttctcctcgctc
cctctgcgtttttga
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