KEGG   Sceloporus undulatus (fence lizard): 121917135
Entry
121917135         CDS       T07740                                 
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
sund  Sceloporus undulatus (fence lizard)
Pathway
sund03030  DNA replication
sund03410  Base excision repair
sund03420  Nucleotide excision repair
sund03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sund00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    121917135 (RFC2)
   03410 Base excision repair
    121917135 (RFC2)
   03420 Nucleotide excision repair
    121917135 (RFC2)
   03430 Mismatch repair
    121917135 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sund03032]
    121917135 (RFC2)
   03036 Chromosome and associated proteins [BR:sund03036]
    121917135 (RFC2)
   03400 DNA repair and recombination proteins [BR:sund03400]
    121917135 (RFC2)
DNA replication proteins [BR:sund03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    121917135 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    121917135 (RFC2)
Chromosome and associated proteins [BR:sund03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    121917135 (RFC2)
DNA repair and recombination proteins [BR:sund03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     121917135 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    121917135 (RFC2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 AAA_14 AAA_16 Viral_helicase1 Mg_chelatase AAA_24 AAA_11 Rad17 AAA_assoc_2 RuvB_N DNAX_ATPase_lid AAA_19 nSTAND3 MipZ AAA_18 AAA_5 AAA_28 ABC_tran AAA_30 AAA_25 AAA_23 NTPase_1 MeaB SLFN-g3_helicase RNA_helicase FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 121917135
NCBI-ProteinID: XP_042298789
LinkDB
Position
11:1783342..1799238
AA seq 349 aa
MAAVAMEASGPEMSSQKEKAAAGPNGGHYELPWVEKYRPMKLSEIVGNEDTVSRLEVFAR
EGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQ
QKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRC
AVLRYTKLTDAQVLARLMKIVEKENVQYTDDGLEAIIFTAQGDMRQALNNLQSTHSGFGF
VNSENVFKVCDEPHPLLVKEMLGHCVSANIDEAYKILAHLWKLGYSPEDIIGNIFRVCKT
FQMAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAAPAAS
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggcggcggttgccatggaggcttcaggaccagagatgtcctctcagaaagagaaggcc
gcagcggggcctaatggcggccattacgagttgccctgggttgaaaagtacaggcctatg
aagctgtcggaaatagttgggaatgaagacactgttagcagactggaggtttttgcaagg
gaaggaaatgtcccaaatattattattgcgggtccgccaggaacgggtaaaaccaccagt
atcctctgcctggcacgagctcttctgggccctgcgttgaaggatgctgttctggagctt
aatgcgtcaaatgacaggggcattgatgttgtgaggaacaaaatcaagatgtttgctcag
cagaaggtcactcttccaaaaggccggcataagatcatcatcttggacgaagcagacagc
atgacagatggagcccagcaagccctgagacggacgatggagatctattccaaaacgacg
cgctttgctcttgcttgcaatgcttctgacaaaatcatagaacccatccagtcccgttgt
gcagtgctccgctacaccaaactgacagacgctcaggtccttgccaggctcatgaaaatt
gtcgagaaggagaacgtccagtatacagacgatggactggaagccattatcttcacagcc
cagggagacatgaggcaggcactgaacaacttgcagtccacccattctggatttggtttt
gtaaacagcgagaatgtgttcaaggtatgcgatgagccccatcccttgctggtgaaggag
atgcttgggcactgtgtcagcgcaaatatcgatgaagcttacaagattctggcccatttg
tggaagcttggctactcacctgaagacatcattggcaacattttcagagtgtgcaaaacc
ttccagatggccgagtatctgaagctggaatttattaaggaaattggctatactcacatg
aagatagcagagggagtgaactcactcttacaaatggcaggcctactagctcggctctgt
caaaagacagctgcccctgcagcaagctga

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