Sceloporus undulatus (fence lizard): 121917140
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Entry
121917140 CDS
T07740
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sund03021
]
121917140
Transcription machinery [BR:
sund03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
121917140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
121917140
NCBI-ProteinID:
XP_042298795
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All DBs
Position
11:8120513..8242759
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AA seq
2147 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSYSRC
LKADVLSVWRRDQRPGRRELWIFWWGDDPNFAGLIHHDLADEEDGVWENGLSYECRTLLF
KAIHNLVERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYFVSEEHLTLAQQSNSPFQVILSPFGLNGTLTGQSFKLSDSATKKLIGEWKQFY
PITSNLKEGLEEKQEEMDWEDDSLAAVEVLVAGVRMVYPACFVLVPQTDIPAPSAPGSSN
CLGAHQVPASTRDPAMSSVTLTPPTSPEDVQTVDARSAQKWVKLSSVSDVFSSDSTSHHG
GRIPRKLANQVVDRVWQECNMNRALTKRKYSATSNGLCEEETVDKIAFWDFVEATQRTNC
ICSRHKSLKPRLAIQQGTVPPVGQQQQAAPKHKANEKQEKGDKPQKRPLTPFHHRVSISD
DVAMEADSASQRLVITASDSQVRFSNLRTNDVAKTPQMHGTEMANSPQPPPLSPHPCEVP
DEGATKTPSTPQSQHFYQMPTPDPLVPSKAMEDRIEGLSQTFPAPFPEVIEPTMYVGTAV
NLEEDDADSTWKFYKVPKKRDIDFLPPPLPSEKFKDDPMGSAGPDALSSATELMVQCRKP
LKVSDELVQQYQSKNQYLAAIVADQEPEMDPYAFVDGDEEFPFPDKKDRQNSEREVGKKH
KTDDGAPNVGEDAMSLFSPSVKQALDAQRVPPHNRTASTSLFHENDLVVSYTDLDNLFNS
DEDELTPGSKRLLNGTDDKSNCKESKAGNLDPLSCISTADLHKMYPTPPSLEQHIMGFSP
MNMNNKEYGSMDTTPGGTILEGNGATAGVQFRIEVDEGFCSPKPSEIKDYSYVYKPENLQ
PFVGCSMFAPLKTLPSQCLPTIKLPEECVYRQSWTVGKLELLPPGPTMPFIKEGDGSTID
QDYGPAYTPQTHTPFGMPPSSAPPSNSGPGILPSPSTPRFPTPRTPRTPRTPRGAGGPAS
AQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSESVMNLFKDCN
FDSCCVCVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNSSGLFLEDELDIL
GRNSECGKEAEKRFEALRATSLEHSGGSKEADRLPDDLILLLQDQCTNLFSPFGAADHDS
LPKVGAVGNVVRAEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKNTCLHHWSKRNVV
DVSMQCSQDILRMLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKMAGRGSYGTDESP
EPLPIPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDIAYVVVCPENEALLNGARTF
FRDLTAIYEACRLGQHRPICKLLPDGIMRLDPAASKQFSEKSVAEWFSQAAHANNDSFSR
LKLXLKVCPIRSGIPYLATTAWDNSLLSQSNLVPPXSHPASTQPPVAGSATPIIHPIITA
ATAVAMNSSSSIPSTATXCQLTLTTTATSSLSSAWASGIPASKINLLIPAIGSMNNATPP
SSSPARAMVQNGQAGRSRNSKQRIPGKPLSPAQPHQSTMEREKWGSPRRDSHAVHLPAAI
VSHIVASFHVREEEESSSSNVWTLGLSRCFLEMXQNLLPIRNIVFVQLVPCQYLLQPSRM
KTTHLHSASEVVAFSAFTQCRRPLPTXTNVKTLTGFAQASMEMAPQKPECIKLXAPPFIL
APVKDKQTVGGETFGEAGPKXSAFRGLLFSHDQRWLLALCTDMYGXLLETCIINIDVPNR
ARKEKGVCRRLGLPSSGMVPGLVQMSSLPWRVVIGRLGRIGHGELKDWSCLLSRRNLQSL
SKRLKDMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRSTTLNMQTSQ
LNTPQDTSCTHILVFPTSASVQVASSTYTTETGLELAFNTNNDGADGMGIFDLLDTADDL
DPDIINILPASPTGSPVHSPSSHFTHGGDMGKGQGTDRLLSTESHDEVTNILQQPLALGY
FVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVPSVQSDELLHSKHSHPLDSNQTS
DVLRFVLEQYNALSWLTCDPATQDRRSCLPVHFVVLNQLYNFIMNML
NT seq
6444 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgcttcgtaccaaacggggccagcctggaggattgccattccaacctattc
tgtctggccgatttaacggggattaaatggaaacgctacgtatggcagggtccgacgtct
gccccgattcttttcccggtgaccgaagaagaccccatcctgagcagctacagccgctgc
ctgaaggccgacgttttgagcgtatggcggcgagaccaaaggcccgggcgcagagagctg
tggatattctggtggggtgatgaccctaactttgctggcctgattcaccacgatctggca
gatgaggaagatggtgtctgggagaatgggctttcctacgaatgccgcactctgcttttc
aaagccattcacaacctggtagaaagatgtctaatgaaccggaactttgtgcgcattggg
aaatggtttgtgaagccttacgagaaagatgaaaaacctataaataaaagcgagcacttg
tcctgctccttcaccttcttcttacacggggacagcaacgtttgtaccagcgtggaaata
aaccagcaccagcctgtgtactttgtcagcgaagagcatctcaccctggcccagcagtct
aacagcccttttcaagttattctgagtccgttcggattaaatggtacgctcacgggacag
tcgttcaagctgtcggattcggcgacgaaaaagctgatcggcgaatggaagcagttctat
ccgatcacatccaacctgaaggagggcttggaggaaaagcaagaagagatggattgggag
gatgactctctggctgccgtggaagtccttgttgctggtgtgcgaatggtctacccagca
tgctttgttctagttcctcagactgacattcccgcgcctagtgctcctgggtcaagcaac
tgcttgggcgcccatcaagtgcctgcttctacaagagacccagcgatgtcttcggttact
ctgactccaccgacatccccggaagacgttcaaacagttgatgctcgctcagcccaaaag
tgggtgaagctctcttctgtttcggatgtgttcagttcggacagcactagtcaccacggt
ggcagaatccctcggaagctggccaaccaagtggtcgatcgagtttggcaagaatgcaat
atgaacagagcactaaccaagaggaagtattctgctacgtcaaatggcttgtgcgaagag
gagacagttgacaaaatagcattttgggactttgtcgaagccacacagaggacaaattgc
atttgctcaaggcacaaaagtctcaaaccaaggcttgcgattcaacaggggacggtgcct
cctgtgggccagcagcagcaagcagctccaaagcacaaggcgaacgaaaagcaagagaag
ggggacaagccccagaagcgtcctttgactccatttcaccaccgtgtgtccattagcgac
gatgtcgccatggaggccgactcggccagccagcggctcgtgatcacggcgtccgacagc
caagtcaggttttcgaacctccgaacgaacgacgtagcgaaaacccctcaaatgcatggc
accgagatggccaactctccccagccgccacccctcagccctcatccgtgcgaagtcccc
gacgaaggggcaaccaaaaccccttccactccccagagccagcatttctatcagatgcct
actccagatcctttggttccttccaaagccatggaagatagaatagagggcttgtcccag
accttcccggctccgtttccggaggttatagagcccacgatgtacgtcggtacggcggtg
aacttggaggaagacgacgcagattccacctggaagttttacaaggttccaaagaaaagg
gacatagatttcttgccacctccgcttccgagcgaaaagtttaaggacgaccccatggga
tctgcagggccagatgctttatcttcagccacagaattaatggtgcaatgcaggaaacct
cttaaggtctctgatgaattggtacagcagtaccagagcaagaatcagtatctagcagca
atagtagccgaccaggagccagaaatggacccgtatgcattcgtcgacggagatgaagaa
tttccctttccggataaaaaggacaggcagaacagtgagcgagaagttgggaagaaacac
aagactgacgatggggcacccaacgtgggagaagatgcgatgtctctttttagtccttct
gtcaaacaagcattggatgcccagcgcgttcctcctcacaatcgcacggcgtcaactagt
ttgtttcatgaaaatgacctggttgtctcctacacggacctcgacaatctcttcaattcc
gatgaagacgagctcacacctgggtctaaaagactgctgaatggaacagatgacaaatcc
aattgcaaagagtcaaaagcaggaaatctggaccccttgtcatgcataagtacggcagat
cttcataaaatgtatcccacgccgccatccttggagcaacacattatggggttttctccc
atgaacatgaacaataaggagtatggcagcatggacactacaccgggaggaaccatccta
gaaggaaatggcgctaccgccggcgttcagttcagaattgaggtagacgaaggattctgt
agtcccaaaccctctgaaataaaggattattcctacgtttataagcctgagaaccttcaa
ccttttgtgggctgctccatgtttgcaccattgaagactctccccagccaatgcctcccg
accatcaaactgccagaggagtgcgtttaccgtcagagctggaccgttggcaagttggag
ttgcttcctccaggacccacaatgccattcatcaaagagggtgacgggagcaccattgat
caagactatggccctgcctataccccgcaaacgcatactccttttggaatgccaccaagc
agtgccccgccaagtaatagcgggccgggcatcctcccttcgccttccactcctcgtttc
ccaactcctcggacaccaaggactcctcgaactccccgcggggctggcgggccggccagt
gcccaaggttcagtcaagtatgagaattcggacttgtattcaccagcttcaacaccatcc
acgtgccggccgctgaattcggttgagccggctaccgttccttctatccccgaggcccac
agcctctacgtcaacctcattctctcggaatcggtgatgaatctcttcaaagactgtaat
tttgacagctgttgcgtctgcgtctgcaatatgaacatcaaaggtgctgacgttggagtt
tacattcccgatccaacccaggaggcccaataccgctgtacctgtggcttcagcgcagtg
atgaacagaaaatttggcaacagctctggcttgttcctggaggacgagttggacatcctg
gggcgcaactcggaatgcggcaaagaagccgagaaacgcttcgaggccctccgcgccact
tctctcgagcatagcggagggtcgaaggaggccgaccggctacccgacgacctgatcctc
ttgctgcaagaccagtgcaccaacttgttctcgccgtttggtgcagcggatcacgactcc
ttgcccaaagttggtgccgttgggaacgtggtacgggccgaggaaagggattgttgcaac
gactgctaccttgcgttggaacacgggcgccagtttatggacaacatgtcgggagggaaa
gttgacgaagcacttgtgaaaaatacttgcttgcatcactggtcaaaacgaaacgttgta
gacgtgagcatgcaatgttctcaggacatcctccgcatgctgctctcgctccagcctgtc
cttcaggatgccattcagaaaaaaaggactgttcggtcttggggcgtacagggccctctc
acgtggcagcagtttcacaaaatggctggccggggctcttacggaactgacgaatctcca
gaaccactgcccattcccactttcttgttgggatacgattatgacttcctggtgctgtcc
ccctttgccttaccgtactgggagagactcatgttggagccctacggatctcagagagac
atagcctacgtcgtggtgtgtccggagaacgaagcgctgctaaacggagcaaggaccttc
ttccgggatctcaccgcgatatacgaggcctgtcggctcggccagcatcgacccatctgc
aaactgttgcccgatggcatcatgaggttggatcctgccgcttccaaacagttctctgag
aagtctgttgccgaatggttctcccaagcagctcatgccaacaacgattccttttctagg
ctcaagctgtagctcaaagtctgcccgatacgatctggtattccttaccttgctacaaca
gcctgggacaattccttgctttctcagtccaacctagttccccccncaagccatcctgca
tcgacccagcctccggtggcaggcagcgccacccccatcatccaccccatcatcaccgca
gccaccgccgtagcaatgaactcaagcagctccatcccttccaccgctaccnnatgccaa
ctcaccttgaccacaactgccacttcgtccctctcttccgcatgggcaagtgggattccg
gcaagcaaaataaaccttctcattcccgccattggcagcatgaacaatgccacccccccc
tcgtcctctccagcacgcgcaatggtccagaatgggcaggctggacgcagccgcaacagc
aagcagcgaatacctgggaagcccctctctcccgcacagccgcaccagagcactatggag
cgtgaaaagtggggatccccacgacgcgattcgcacgcggtccacttacccgcggccatc
gtttctcacatcgtcgcatcctttcacgtacgagaagaagaggagagcagctcctccaac
gtgtggactcttggcctctcccgctgctttctagaaatgnaacaaaatcttctcccaatc
agaaacatcgtttttgttcagctcgttccttgtcagtatctgttacaaccgtcaagaatg
aagacgacacatctacactcagcatctgaagtcgtggcgttctcagccttcacgcagtgc
cgcagaccgctccccactncaaccaatgtgaaaacgttaaccgggtttgcccaggctagc
atggaaatggcacctcagaaaccggagtgtatcaagctanttgcgccgcctttcatattg
gctcctgtcaaagataaacagaccgtgggaggagaaacatttggggaggctgggccgaaa
taaagtgcttttcgtgggttactgttttcccacgatcaacggtggcttcttgcgttatgc
acagatatgtatggangactcttggaaacatgcatcattaacattgatgtaccaaacagg
gctcgcaaggaaaaaggggtctgccgcaggctgggtctcccgagctctggaatggtgcct
gggcttgtccagatgagttcgttgccctggagggttgtaataggacgtcttggaagaata
ggccacggggaactgaaagattggagctgtttgctaagtcgccgaaatctgcagtccctc
agcaagaggctgaaagacatgtgccggatgtgtggcatatccgcagctgattctcccagc
atcctcagcgcttgcttagtggcaatggaaccacagggatcctttgtcatcatgccagat
tctgtgtcaactggctcggtatttgggcgcagcaccaccctaaatatgcagacgtcccag
ctgaacacgccgcaggatacgtcgtgtacccacatcctcgtgttccccacgtctgcgtcg
gtgcaagtcgcctcgtccacctacaccactgaaactggcttggaactggcctttaatacg
aacaatgatggagccgatggaatggggatctttgacttgttggacactgcggacgacctc
gaccctgatattataaatatcctgcctgcgtccccgacagggtcccctgtgcattcacca
agttcccattttactcatggaggcgatatgggcaaggggcaaggtaccgaccgattgctc
tcgacagagtctcacgatgaagtcaccaacatcctgcagcaacccttggccctcggttac
ttcgtctcaactgccaaagcaggtccgttgcctgactggttttggtcggcgtgtcctcaa
gcacaaaatcagtgcccgctgtttcttaaggcttctttgcacctccatgtgccttcagtg
caatcggacgagctacttcacagtaaacactcccaccctcttgattcgaatcaaacttcc
gatgtcctcaggtttgtgttggaacagtacaacgcactctcctggctaacctgtgacccc
gcgacccaggaccggcggtcgtgtctcccggttcactttgtggtgctgaaccagttgtat
aactttatcatgaatatgctgtga
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integrated database retrieval system
